RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 GATA1P15976 413 aaPredicted RBP12.78□□□□□ -0.36
PBX3-205ENST00000373492 SSTP61278 116 aa12.78□□□□□ -0.36
PBX3-205ENST00000373492 FAM74A4Q5TZK3 123 aa12.78□□□□□ -0.36
PBX3-205ENST00000373492 LYZL1Q6UWQ5 148 aa12.78□□□□□ -0.36
PBX3-205ENST00000373492 MRPL23Q16540 153 aaKnown RBP12.77□□□□□ -0.37
PBX3-205ENST00000373492 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.37
PBX3-205ENST00000373492 A0A087WWL8 130 aa12.76□□□□□ -0.37
PBX3-205ENST00000373492 TRBV6-4A0A1B0GX49 114 aa12.76□□□□□ -0.37
PBX3-205ENST00000373492 SMIM17P0DL12 118 aa12.76□□□□□ -0.37
PBX3-205ENST00000373492 CCL18P55774 89 aa12.76□□□□□ -0.37
PBX3-205ENST00000373492 RHOHQ15669 191 aa12.76□□□□□ -0.37
PBX3-205ENST00000373492 COMMD7Q86VX2 200 aa12.76□□□□□ -0.37
PBX3-205ENST00000373492 OR10G8Q8NGN5 311 aa12.76□□□□□ -0.37
PBX3-205ENST00000373492 AP1S3Q96PC3 154 aa12.76□□□□□ -0.37
PBX3-205ENST00000373492 SAMD10Q9BYL1 202 aa12.76□□□□□ -0.37
PBX3-205ENST00000373492 A0A096LPF7 62 aa12.75□□□□□ -0.37
PBX3-205ENST00000373492 CRYGDP07320 174 aa12.75□□□□□ -0.37
PBX3-205ENST00000373492 GYPEP15421 78 aa12.75□□□□□ -0.37
PBX3-205ENST00000373492 CTRLP40313 264 aa12.75□□□□□ -0.37
PBX3-205ENST00000373492 RNF212Q495C1 297 aa12.75□□□□□ -0.37
PBX3-205ENST00000373492 UFSP1Q6NVU6 142 aa12.75□□□□□ -0.37
PBX3-205ENST00000373492 WDR73Q6P4I2 378 aa12.75□□□□□ -0.37
PBX3-205ENST00000373492 SLC25A29Q8N8R3 303 aa12.75□□□□□ -0.37
PBX3-205ENST00000373492 TSKUQ8WUA8 353 aa12.75□□□□□ -0.37
PBX3-205ENST00000373492 SRIP30626 198 aa12.74□□□□□ -0.37
PBX3-205ENST00000373492 PNRC1Q12796 327 aaPredicted RBP12.74□□□□□ -0.37
PBX3-205ENST00000373492 BORCS7Q96B45 105 aa12.74□□□□□ -0.37
PBX3-205ENST00000373492 GFRA4Q9GZZ7 299 aa12.74□□□□□ -0.37
PBX3-205ENST00000373492 V9GYV3 84 aa12.74□□□□□ -0.37
PBX3-205ENST00000373492 DNAH6Q9C0G6 4158 aa12.73□□□□□ -0.37
PBX3-205ENST00000373492 LINC00862A6NCI5 91 aa12.73□□□□□ -0.37
PBX3-205ENST00000373492 FAM231BA6NCW3 169 aa12.73□□□□□ -0.37
PBX3-205ENST00000373492 K7EQD1 137 aa12.73□□□□□ -0.37
PBX3-205ENST00000373492 TRGC1P0CF51 173 aa12.73□□□□□ -0.37
PBX3-205ENST00000373492 NTF3P20783 257 aa12.73□□□□□ -0.37
PBX3-205ENST00000373492 GTSF1Q8WW33 167 aa12.73□□□□□ -0.37
PBX3-205ENST00000373492 FOXA3P55318 350 aaPredicted RBP12.72□□□□□ -0.37
PBX3-205ENST00000373492 ZNF56Q15929 161 aa12.72□□□□□ -0.37
PBX3-205ENST00000373492 NEGR1Q7Z3B1 354 aa12.72□□□□□ -0.37
PBX3-205ENST00000373492 SH2D6Q7Z4S9 175 aa12.72□□□□□ -0.37
PBX3-205ENST00000373492 C14orf178Q8N769 122 aaPredicted RBP12.72□□□□□ -0.37
PBX3-205ENST00000373492 PGLYRP4Q96LB8 373 aa12.72□□□□□ -0.37
PBX3-205ENST00000373492 MSRB1Q9NZV6 116 aa12.72□□□□□ -0.37
PBX3-205ENST00000373492 TMEM218A2RU14 115 aa12.71□□□□□ -0.37
PBX3-205ENST00000373492 FAM3BP58499 235 aaPredicted RBP12.71□□□□□ -0.37
PBX3-205ENST00000373492 RAB4BP61018 213 aa12.71□□□□□ -0.37
PBX3-205ENST00000373492 TWIST1Q15672 202 aa12.71□□□□□ -0.37
PBX3-205ENST00000373492 CNFNQ9BYD5 112 aa12.71□□□□□ -0.37
PBX3-205ENST00000373492 LOC100131303A0A0U1RQF7 123 aa12.7□□□□□ -0.38
PBX3-205ENST00000373492 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
PBX3-205ENST00000373492 F5H697 171 aa12.7□□□□□ -0.38
PBX3-205ENST00000373492 F8W036 122 aa12.7□□□□□ -0.38
PBX3-205ENST00000373492 Q6ZSN1 163 aa12.7□□□□□ -0.38
PBX3-205ENST00000373492 EPPK1P58107 5090 aaKnown RBP12.69□□□□□ -0.38
PBX3-205ENST00000373492 PPP1R2P9O14990 202 aa12.69□□□□□ -0.38
PBX3-205ENST00000373492 ESRGQ1W209 222 aa12.69□□□□□ -0.38
PBX3-205ENST00000373492 SMIM15Q7Z3B0 74 aa12.69□□□□□ -0.38
PBX3-205ENST00000373492 DPH3P1Q9H4G8 78 aa12.69□□□□□ -0.38
PBX3-205ENST00000373492 MGPP08493 103 aa12.68□□□□□ -0.38
PBX3-205ENST00000373492 SEC11CQ9BY50 192 aa12.68□□□□□ -0.38
PBX3-205ENST00000373492 NAT8BQ9UHF3 227 aa12.68□□□□□ -0.38
PBX3-205ENST00000373492 LINC00588Q9Y4M8 146 aa12.68□□□□□ -0.38
PBX3-205ENST00000373492 KIF25-AS1Q9Y6Z4 181 aa12.68□□□□□ -0.38
PBX3-205ENST00000373492 A0A1B0GUT8 65 aa12.67□□□□□ -0.38
PBX3-205ENST00000373492 MT-ND4LP03901 98 aa12.67□□□□□ -0.38
PBX3-205ENST00000373492 EVI2AP22794 236 aa12.67□□□□□ -0.38
PBX3-205ENST00000373492 TRBV10-1A0A0K0K1A3 114 aa12.66□□□□□ -0.38
PBX3-205ENST00000373492 ADCYAP1P18509 176 aa12.66□□□□□ -0.38
PBX3-205ENST00000373492 LYPD5Q6UWN5 251 aa12.66□□□□□ -0.38
PBX3-205ENST00000373492 ANAPC16Q96DE5 110 aa12.66□□□□□ -0.38
PBX3-205ENST00000373492 MRPS16Q9Y3D3 137 aaKnown RBP12.66□□□□□ -0.38
PBX3-205ENST00000373492 SMIM27A0A1W2PRY6 76 aa12.65□□□□□ -0.38
PBX3-205ENST00000373492 GAGE12JA6NER3 117 aa12.65□□□□□ -0.38
PBX3-205ENST00000373492 H7C1H1 209 aa12.65□□□□□ -0.38
PBX3-205ENST00000373492 RPL36AP83881 106 aaKnown RBP12.65□□□□□ -0.38
PBX3-205ENST00000373492 GAGE1Q13065 139 aa12.65□□□□□ -0.38
PBX3-205ENST00000373492 GAGE4Q13068 117 aa12.65□□□□□ -0.38
PBX3-205ENST00000373492 GAGE5Q13069 117 aa12.65□□□□□ -0.38
PBX3-205ENST00000373492 GAGE13Q4V321 117 aa12.65□□□□□ -0.38
PBX3-205ENST00000373492 NUP35Q8NFH5 326 aa12.65□□□□□ -0.38
PBX3-205ENST00000373492 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.38
PBX3-205ENST00000373492 RPL36ALQ969Q0 106 aaKnown RBP12.65□□□□□ -0.38
PBX3-205ENST00000373492 DNAH10Q8IVF4 4471 aa12.64□□□□□ -0.39
PBX3-205ENST00000373492 LINC00315P59091 139 aa12.64□□□□□ -0.39
PBX3-205ENST00000373492 RIGQ13278 110 aa12.64□□□□□ -0.39
PBX3-205ENST00000373492 UPK3BQ9BT76 320 aa12.64□□□□□ -0.39
PBX3-205ENST00000373492 ZNRF2Q8NHG8 242 aa12.63□□□□□ -0.39
PBX3-205ENST00000373492 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
PBX3-205ENST00000373492 LINC00694P0DN24 101 aa12.61□□□□□ -0.39
PBX3-205ENST00000373492 TIRAPP58753 221 aa12.61□□□□□ -0.39
PBX3-205ENST00000373492 SUMO4Q6EEV6 95 aa12.61□□□□□ -0.39
PBX3-205ENST00000373492 Q6ZR54 194 aa12.61□□□□□ -0.39
PBX3-205ENST00000373492 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.61□□□□□ -0.39
PBX3-205ENST00000373492 NEXN-AS1Q8NBZ9 246 aa12.61□□□□□ -0.39
PBX3-205ENST00000373492 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
PBX3-205ENST00000373492 Q9H8V8 135 aa12.61□□□□□ -0.39
PBX3-205ENST00000373492 Q9UF83 564 aa12.61□□□□□ -0.39
PBX3-205ENST00000373492 FRAS1Q86XX4 4008 aa12.61□□□□□ -0.39
PBX3-205ENST00000373492 IGLV2-18A0A075B6J9 118 aa12.6□□□□□ -0.39
PBX3-205ENST00000373492 A0A1B0GW15 77 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms