RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 RPL39P62891 51 aaKnown RBP9.48□□□□□ -0.89
CTPS1-202ENST00000372621 PMVKQ15126 192 aa9.48□□□□□ -0.89
CTPS1-202ENST00000372621 TMEM141Q96I45 108 aa9.48□□□□□ -0.89
CTPS1-202ENST00000372621 HOXA3O43365 443 aaPredicted RBP9.48□□□□□ -0.89
CTPS1-202ENST00000372621 PAPPA-AS1Q5QFB9 102 aa9.48□□□□□ -0.89
CTPS1-202ENST00000372621 AMTNQ6UX39 209 aa9.48□□□□□ -0.89
CTPS1-202ENST00000372621 CRYBG3Q68DQ2 2970 aa9.48□□□□□ -0.89
CTPS1-202ENST00000372621 SDHAF1A6NFY7 115 aa9.48□□□□□ -0.89
CTPS1-202ENST00000372621 UBE2D1P51668 147 aa9.48□□□□□ -0.89
CTPS1-202ENST00000372621 KLHL30-AS1Q8NEE0 82 aa9.48□□□□□ -0.89
CTPS1-202ENST00000372621 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.47□□□□□ -0.897e-7■■■■■ 45.9
CTPS1-202ENST00000372621 CD300EQ496F6 205 aaPredicted RBP9.47□□□□□ -0.89
CTPS1-202ENST00000372621 KIR2DL4Q99706 377 aa9.47□□□□□ -0.89
CTPS1-202ENST00000372621 MAP1AP78559 2803 aaPredicted RBP9.47□□□□□ -0.89
CTPS1-202ENST00000372621 A0A0J9YX75 114 aa9.47□□□□□ -0.89
CTPS1-202ENST00000372621 MDFICQ9P1T7 246 aa9.47□□□□□ -0.89
CTPS1-202ENST00000372621 C10orf99Q6UWK7 81 aa9.46□□□□□ -0.89
CTPS1-202ENST00000372621 DEFB104AQ8WTQ1 72 aa9.46□□□□□ -0.89
CTPS1-202ENST00000372621 B4DSR2 109 aa9.46□□□□□ -0.89
CTPS1-202ENST00000372621 ZNF876PQ49A33 203 aa9.46□□□□□ -0.89
CTPS1-202ENST00000372621 A0A0J9YY99 117 aa9.46□□□□□ -0.9
CTPS1-202ENST00000372621 F5H697 171 aa9.46□□□□□ -0.9
CTPS1-202ENST00000372621 M0QY20 66 aa9.46□□□□□ -0.9
CTPS1-202ENST00000372621 ZNF688P0C7X2 276 aa9.46□□□□□ -0.9
CTPS1-202ENST00000372621 EMP1P54849 157 aa9.46□□□□□ -0.9
CTPS1-202ENST00000372621 SCGB2A2Q13296 93 aa9.46□□□□□ -0.9
CTPS1-202ENST00000372621 SCGB1D4Q6XE38 83 aa9.46□□□□□ -0.9
CTPS1-202ENST00000372621 ZNRF2Q8NHG8 242 aa9.46□□□□□ -0.9
CTPS1-202ENST00000372621 CSMD2Q7Z408 3487 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 K7EQG2 157 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 SPG11Q96JI7 2443 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 TRAV12-2A0A075B6T6 113 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 TMEM89A2RUT3 159 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 GAGE13Q4V321 117 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 Q8N1Y9 231 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 PGPEP1Q9NXJ5 209 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 CSPG4Q6UVK1 2322 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 CFAP46Q8IYW2 2715 aa9.45□□□□□ -0.9
CTPS1-202ENST00000372621 TMEM238LA0A1B0GVL6 79 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 A6NJY4 79 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 IGHV4-59P01825 116 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 TSPEAR-AS2P59090 65 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 GATA3P23771 443 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 HERVK_113P61574 105 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 NSUN5P1Q3KNT7 163 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 SH2D6Q7Z4S9 175 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 AMELXQ99217 191 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
CTPS1-202ENST00000372621 DEFB112Q30KQ8 113 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 FAM74A4Q5TZK3 123 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 RNF152Q8N8N0 203 aa9.44□□□□□ -0.9
CTPS1-202ENST00000372621 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
CTPS1-202ENST00000372621 ETDBQ3ZM63 59 aa9.43□□□□□ -0.9
CTPS1-202ENST00000372621 IGHV1OR15-1A0A075B7D0 117 aa9.43□□□□□ -0.9
CTPS1-202ENST00000372621 TSPAN13O95857 204 aa9.43□□□□□ -0.9
CTPS1-202ENST00000372621 SYT8Q8NBV8 401 aa9.43□□□□□ -0.9
CTPS1-202ENST00000372621 MRPL16Q9NX20 251 aaKnown RBP9.43□□□□□ -0.9
CTPS1-202ENST00000372621 TMEM238C9JI98 176 aa9.43□□□□□ -0.9
CTPS1-202ENST00000372621 IGKV3-20P01619 116 aa9.43□□□□□ -0.9
CTPS1-202ENST00000372621 NFE4Q86UQ8 179 aa9.43□□□□□ -0.9
CTPS1-202ENST00000372621 SPAG8Q99932 426 aaPredicted RBP9.43□□□□□ -0.9
CTPS1-202ENST00000372621 PKD1L2Q7Z442 2459 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 P0DMU3 169 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 FAM231AP0DMU4 169 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 FAM231CP0DMU5 169 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 RHOHQ15669 191 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 SLC25A29Q8N8R3 303 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 ZNF256Q9Y2P7 627 aaPredicted RBP9.42□□□□□ -0.9
CTPS1-202ENST00000372621 IGHV3-30P01768 117 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 IGHV3-30-5P0DP03 117 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 UBE2D3P61077 147 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 UBE2D2P62837 147 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 MTURNQ8N3F0 131 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 DOPEY1Q5JWR5 2465 aa9.42□□□□□ -0.9
CTPS1-202ENST00000372621 ZNF56Q15929 161 aa9.41□□□□□ -0.9
CTPS1-202ENST00000372621 SPINK13Q1W4C9 94 aa9.41□□□□□ -0.9
CTPS1-202ENST00000372621 TRPT1Q86TN4 253 aaKnown RBP9.41□□□□□ -0.9
CTPS1-202ENST00000372621 FLNCQ14315 2725 aa9.41□□□□□ -0.9
CTPS1-202ENST00000372621 TMEM170BQ5T4T1 132 aa9.41□□□□□ -0.9
CTPS1-202ENST00000372621 CFAP126Q5VTH2 177 aa9.41□□□□□ -0.9
CTPS1-202ENST00000372621 NDUFA11Q86Y39 141 aa9.41□□□□□ -0.9
CTPS1-202ENST00000372621 DOPEY2Q9Y3R5 2298 aa9.41□□□□□ -0.9
CTPS1-202ENST00000372621 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
CTPS1-202ENST00000372621 OPRPNQ99935 248 aaPredicted RBP9.4□□□□□ -0.9
CTPS1-202ENST00000372621 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
CTPS1-202ENST00000372621 TSSC4Q9Y5U2 329 aaPredicted RBP9.4□□□□□ -0.9
CTPS1-202ENST00000372621 A0A096LNT2 108 aa9.4□□□□□ -0.91
CTPS1-202ENST00000372621 J3QR89 54 aa9.4□□□□□ -0.91
CTPS1-202ENST00000372621 SYNJ2BPP57105 145 aa9.4□□□□□ -0.91
CTPS1-202ENST00000372621 DLX4Q92988 240 aaPredicted RBP9.4□□□□□ -0.91
CTPS1-202ENST00000372621 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
CTPS1-202ENST00000372621 J3QQQ9 107 aa9.39□□□□□ -0.91
CTPS1-202ENST00000372621 DSCR9P59020 149 aa9.39□□□□□ -0.91
CTPS1-202ENST00000372621 C20orf203Q8NBC4 194 aa9.39□□□□□ -0.91
CTPS1-202ENST00000372621 USP9XQ93008 2570 aaPredicted RBP9.39□□□□□ -0.91
CTPS1-202ENST00000372621 TMEM223A0PJW6 202 aa9.39□□□□□ -0.91
CTPS1-202ENST00000372621 CFC1BP0CG36 223 aa9.39□□□□□ -0.91
CTPS1-202ENST00000372621 CFC1P0CG37 223 aa9.39□□□□□ -0.91
CTPS1-202ENST00000372621 INSL3P51460 131 aa9.39□□□□□ -0.91
CTPS1-202ENST00000372621 LINC01356Q8N9X3 169 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms