RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 TNCP24821 2201 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 ZNF815PA8K554 130 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 H7C1H1 209 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 SLC25A16P16260 332 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 Q71RC1 249 aaPredicted RBP6.76□□□□□ -1.33
ATG4A-203ENST00000372232 LINC00305Q7Z4B0 112 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 OTORQ9NRC9 128 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 PLAUP00749 431 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 RNASE2P10153 161 aaKnown RBP6.75□□□□□ -1.33
ATG4A-203ENST00000372232 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 LINC01560Q8TB33 94 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 NDUFA4L2Q9NRX3 87 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 hADV29S1A0JD25 119 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 ACYP1P07311 99 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 IGHV1-8P0DP01 117 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 GP9P14770 177 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 CXCL5P42830 114 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 FBXL19-AS1Q494R0 122 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 TMEM86BQ8N661 226 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 LINC01356Q8N9X3 169 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 FAM19A4Q96LR4 140 aa6.75□□□□□ -1.33
ATG4A-203ENST00000372232 ZNF256Q9Y2P7 627 aaPredicted RBP6.75□□□□□ -1.33
ATG4A-203ENST00000372232 KMT2BQ9UMN6 2715 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-203ENST00000372232 IGLV2-18A0A075B6J9 118 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 E7EUB6 86 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 H3BT86 120 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 IGHV3-30P01768 117 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 IGHV3-33P01772 117 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 IGHV3-30-5P0DP03 117 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 RPL35AP18077 110 aaKnown RBP6.74□□□□□ -1.33
ATG4A-203ENST00000372232 CRIP1P50238 77 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 TMEM167AQ8TBQ9 72 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 RNF185Q96GF1 192 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 V9GYY9 64 aa6.74□□□□□ -1.33
ATG4A-203ENST00000372232 ANKHD1Q8IWZ3 2542 aaKnown RBP6.73□□□□□ -1.33
ATG4A-203ENST00000372232 IGKV1D-37A0A075B6S9 117 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 A0A0J9YY99 117 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 IGLV2-23P01705 113 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 HIST1H4AP62805 103 aaKnown RBP6.73□□□□□ -1.33
ATG4A-203ENST00000372232 C5orf38Q86SI9 138 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 TMEM75Q8N9X5 138 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 CYSTM1Q9H1C7 97 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 PRORYQ9H606 182 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 ARFGEF3Q5TH69 2177 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 LY6LH3BQJ8 138 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 ERHP84090 104 aaKnown RBP6.73□□□□□ -1.33
ATG4A-203ENST00000372232 GOLT1AQ6ZVE7 132 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 LINC00643Q86TS7 51 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 THAP8Q8NA92 274 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 METTL26Q96S19 204 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 DSCR8Q96T75 97 aa6.73□□□□□ -1.33
ATG4A-203ENST00000372232 LYNX1G3V0Z9 82 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 ATOX1O00244 68 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 CCL21O00585 134 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 LYNX1P0DP58 116 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
ATG4A-203ENST00000372232 WT1-ASQ06250 92 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 ZNF415Q09FC8 603 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 C2orf82Q6UX34 121 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 LINC00336Q6ZUF6 198 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 ZFYVE26Q68DK2 2539 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 KLRB1Q12918 225 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 SHANK2-AS3Q9BTD1 123 aa6.72□□□□□ -1.33
ATG4A-203ENST00000372232 TRAV13-1A0A0B4J241 112 aa6.71□□□□□ -1.33
ATG4A-203ENST00000372232 A0A0B4J2C4 111 aa6.71□□□□□ -1.33
ATG4A-203ENST00000372232 J3QQQ9 107 aa6.71□□□□□ -1.33
ATG4A-203ENST00000372232 PFN2P35080 140 aa6.71□□□□□ -1.33
ATG4A-203ENST00000372232 CDSNQ15517 529 aa6.71□□□□□ -1.33
ATG4A-203ENST00000372232 MRGPRG-AS1Q2M3A8 158 aa6.71□□□□□ -1.33
ATG4A-203ENST00000372232 C10orf55Q5SWW7 151 aa6.71□□□□□ -1.33
ATG4A-203ENST00000372232 TMEM263Q8WUH6 116 aaKnown RBP6.71□□□□□ -1.33
ATG4A-203ENST00000372232 LRBAP50851 2863 aa6.71□□□□□ -1.34
ATG4A-203ENST00000372232 IGLV1-47P01700 117 aa6.71□□□□□ -1.34
ATG4A-203ENST00000372232 HERVK_113P61574 105 aa6.71□□□□□ -1.34
ATG4A-203ENST00000372232 LAGE3Q14657 143 aa6.71□□□□□ -1.34
ATG4A-203ENST00000372232 VMA21Q3ZAQ7 101 aa6.71□□□□□ -1.34
ATG4A-203ENST00000372232 SDIM1Q6ZPB5 146 aa6.71□□□□□ -1.34
ATG4A-203ENST00000372232 SLC25A29Q8N8R3 303 aa6.71□□□□□ -1.34
ATG4A-203ENST00000372232 UPK3BQ9BT76 320 aa6.71□□□□□ -1.34
ATG4A-203ENST00000372232 ATRXP46100 2492 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 IGHV3-72A0A0B4J1Y9 119 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 H7C423 109 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 ENSAO43768 121 aaKnown RBP6.7□□□□□ -1.34
ATG4A-203ENST00000372232 GAS8-AS1O95177 125 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 DLX1P56177 255 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 C9orf85Q96MD7 179 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 AGPAT4-IT1Q9H0P7 198 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 PKIGQ9Y2B9 76 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 NBASA2RRP1 2371 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 MALRD1Q5VYJ5 2156 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 TRBV30A0A0K0K1B3 111 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 H3BTX0 84 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 SUB1P53999 127 aaKnown RBP eCLIP6.7□□□□□ -1.34
ATG4A-203ENST00000372232 EXOC3-AS1Q8N2X6 119 aa6.7□□□□□ -1.34
ATG4A-203ENST00000372232 CHD6Q8TD26 2715 aa6.69□□□□□ -1.34
ATG4A-203ENST00000372232 CACNA1BQ00975 2339 aa6.69□□□□□ -1.34
ATG4A-203ENST00000372232 ABCA4P78363 2273 aa6.69□□□□□ -1.34
ATG4A-203ENST00000372232 IGSF10Q6WRI0 2623 aa6.69□□□□□ -1.34
ATG4A-203ENST00000372232 TACC2O95359 2948 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms