RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 MUC6Q6W4X9 2439 aa15.09■□□□□ 0.01
LMO4-202ENST00000370544 MED13LQ71F56 2210 aa15.09■□□□□ 0.01
LMO4-202ENST00000370544 A0A0J9YXV3 536 aa15.08■□□□□ 0.01
LMO4-202ENST00000370544 TRBV6-1A0A0K0K1D8 114 aa15.08■□□□□ 0
LMO4-202ENST00000370544 P0C879 139 aa15.08■□□□□ 0
LMO4-202ENST00000370544 LINC01545Q5VT33 79 aa15.08■□□□□ 0
LMO4-202ENST00000370544 LINC00574Q9H8X3 128 aa15.08■□□□□ 0
LMO4-202ENST00000370544 CLPSL1A2RUU4 121 aa15.07■□□□□ 0
LMO4-202ENST00000370544 CTRLP40313 264 aa15.07■□□□□ 0
LMO4-202ENST00000370544 ZNF503Q96F45 646 aa15.07■□□□□ 0
LMO4-202ENST00000370544 CITED2Q99967 270 aaPredicted RBP15.07■□□□□ 0
LMO4-202ENST00000370544 IGLV10-54A0A075B6I4 117 aa15.07■□□□□ 0
LMO4-202ENST00000370544 UBE2BP63146 152 aa15.07■□□□□ 0
LMO4-202ENST00000370544 C19orf84I3L1E1 186 aa15.07■□□□□ 0
LMO4-202ENST00000370544 LMO4P61968 165 aa15.07■□□□□ 0
LMO4-202ENST00000370544 KIR2DL5BA0A0G2JN68 375 aa15.07■□□□□ 0
LMO4-202ENST00000370544 KIR2DL5BA0A0G2JPC4 375 aa15.07■□□□□ 0
LMO4-202ENST00000370544 KIR2DL5AQ8N109 375 aa15.07■□□□□ 0
LMO4-202ENST00000370544 SHANK1Q9Y566 2161 aa15.07■□□□□ 0
LMO4-202ENST00000370544 TRAV4A0A0B4J268 109 aa15.07■□□□□ 0
LMO4-202ENST00000370544 IGHV3-30P01768 117 aa15.07■□□□□ 0
LMO4-202ENST00000370544 IGHV3-33P01772 117 aa15.07■□□□□ 0
LMO4-202ENST00000370544 IGHV3-30-3P0DP02 117 aa15.07■□□□□ 0
LMO4-202ENST00000370544 IGHV3-30-5P0DP03 117 aa15.07■□□□□ 0
LMO4-202ENST00000370544 ESM1Q9NQ30 184 aa15.06■□□□□ 0
LMO4-202ENST00000370544 IGKV1D-37A0A075B6S9 117 aa15.06■□□□□ 0
LMO4-202ENST00000370544 LOXL1Q08397 574 aaPredicted RBP15.06■□□□□ 0
LMO4-202ENST00000370544 TNFRSF13BO14836 293 aaPredicted RBP15.06■□□□□ 0
LMO4-202ENST00000370544 TRBV7-3A0A075B6L6 115 aa15.05■□□□□ -0
LMO4-202ENST00000370544 COX7A2LO14548 114 aa15.05■□□□□ -0
LMO4-202ENST00000370544 RPL39P62891 51 aaKnown RBP15.05■□□□□ -0
LMO4-202ENST00000370544 TINCRA0A1B0GVN0 87 aa15.05■□□□□ -0
LMO4-202ENST00000370544 CAMK2N2Q96S95 79 aa15.05■□□□□ -0
LMO4-202ENST00000370544 IGHG4P01861 327 aa15.05■□□□□ -0
LMO4-202ENST00000370544 CCL18P55774 89 aa15.04■□□□□ -0
LMO4-202ENST00000370544 RPL18AQ02543 176 aaKnown RBP15.04■□□□□ -0
LMO4-202ENST00000370544 CCDC140Q96MF4 163 aa15.04■□□□□ -0
LMO4-202ENST00000370544 DNAJC9-AS1A6NH13 148 aa15.04■□□□□ -0
LMO4-202ENST00000370544 Q6ZPA2 131 aa15.04■□□□□ -0
LMO4-202ENST00000370544 HHLA3Q9XRX5 114 aa15.04■□□□□ -0
LMO4-202ENST00000370544 ANKRD39Q53RE8 183 aa15.04■□□□□ -0
LMO4-202ENST00000370544 TOMM6Q96B49 74 aa15.03■□□□□ -0
LMO4-202ENST00000370544 TMEM61Q8N0U2 210 aa15.03■□□□□ -0
LMO4-202ENST00000370544 IFITM1P13164 125 aa15.03■□□□□ -0
LMO4-202ENST00000370544 A0A0J9YX75 114 aa15.03■□□□□ -0
LMO4-202ENST00000370544 C22orf34Q6ZV56 151 aa15.03■□□□□ -0
LMO4-202ENST00000370544 COL4A4P53420 1690 aaPredicted RBP15.03■□□□□ -0
LMO4-202ENST00000370544 TRAV12-1A0A0B4J245 112 aa15.03■□□□□ -0
LMO4-202ENST00000370544 PROP1O75360 226 aa15.02■□□□□ -0
LMO4-202ENST00000370544 BRWD1-AS2P59051 145 aa15.02■□□□□ -0
LMO4-202ENST00000370544 DEFB135Q30KP9 77 aa15.02■□□□□ -0
LMO4-202ENST00000370544 COX7B2Q8TF08 81 aa15.02■□□□□ -0
LMO4-202ENST00000370544 NTN5Q8WTR8 489 aaPredicted RBP15.02■□□□□ -0
LMO4-202ENST00000370544 TTC28Q96AY4 2481 aa15.02□□□□□ -0.01
LMO4-202ENST00000370544 C9orf153Q5TBE3 101 aa15.02□□□□□ -0.01
LMO4-202ENST00000370544 CRIP3Q6Q6R5 217 aa15.02□□□□□ -0.01
LMO4-202ENST00000370544 BAALCQ8WXS3 180 aa15.02□□□□□ -0.01
LMO4-202ENST00000370544 ORMDL1Q9P0S3 153 aa15.02□□□□□ -0.01
LMO4-202ENST00000370544 C19orf71A6NCJ1 209 aa15.01□□□□□ -0.01
LMO4-202ENST00000370544 LRRC75A-AS1Q8N1F1 130 aa15.01□□□□□ -0.01
LMO4-202ENST00000370544 LINC01548A6NM66 108 aa15□□□□□ -0.01
LMO4-202ENST00000370544 MUSTN1Q8IVN3 82 aa15□□□□□ -0.01
LMO4-202ENST00000370544 DEFB125Q8N687 156 aa15□□□□□ -0.01
LMO4-202ENST00000370544 BAALC-AS2P0C853 105 aa15□□□□□ -0.01
LMO4-202ENST00000370544 MDFICQ9P1T7 246 aa15□□□□□ -0.01
LMO4-202ENST00000370544 HIST2H2BCQ6DN03 193 aa14.99□□□□□ -0.01
LMO4-202ENST00000370544 FAM208BQ5VWN6 2430 aa14.99□□□□□ -0.01
LMO4-202ENST00000370544 F8W735 103 aaPredicted RBP14.99□□□□□ -0.01
LMO4-202ENST00000370544 SND1-IT1Q9HBX3 110 aa14.99□□□□□ -0.01
LMO4-202ENST00000370544 DEFB105AQ8NG35 78 aa14.99□□□□□ -0.01
LMO4-202ENST00000370544 MAP6D1Q9H9H5 199 aa14.99□□□□□ -0.01
LMO4-202ENST00000370544 DEFB4AO15263 64 aa14.99□□□□□ -0.01
LMO4-202ENST00000370544 CCL25O15444 150 aa14.99□□□□□ -0.01
LMO4-202ENST00000370544 TIMM17AQ99595 171 aa14.99□□□□□ -0.01
LMO4-202ENST00000370544 PKIGQ9Y2B9 76 aa14.99□□□□□ -0.01
LMO4-202ENST00000370544 C1orf229Q6ZS94 237 aaPredicted RBP14.99□□□□□ -0.01
LMO4-202ENST00000370544 Q6ZVH6 145 aa14.98□□□□□ -0.01
LMO4-202ENST00000370544 FRMD6-AS1P0C7T7 363 aa14.98□□□□□ -0.01
LMO4-202ENST00000370544 C15orf53Q8NAA6 179 aa14.98□□□□□ -0.01
LMO4-202ENST00000370544 TMEM263Q8WUH6 116 aaKnown RBP14.97□□□□□ -0.01
LMO4-202ENST00000370544 IGLL5B9A064 214 aa14.97□□□□□ -0.01
LMO4-202ENST00000370544 TDRG1Q3Y452 100 aa14.97□□□□□ -0.01
LMO4-202ENST00000370544 IGHV4-4A0A075B6R2 117 aa14.96□□□□□ -0.01
LMO4-202ENST00000370544 GAGE12HA6NDE8 117 aa14.96□□□□□ -0.01
LMO4-202ENST00000370544 INSL3P51460 131 aa14.96□□□□□ -0.01
LMO4-202ENST00000370544 FSTL3O95633 263 aa14.96□□□□□ -0.01
LMO4-202ENST00000370544 DYSFO75923 2080 aa14.96□□□□□ -0.01
LMO4-202ENST00000370544 ETDCA0A1B0GVM5 59 aa14.96□□□□□ -0.01
LMO4-202ENST00000370544 A4D1N5 150 aa14.96□□□□□ -0.01
LMO4-202ENST00000370544 SPANXDQ9BXN6 97 aa14.96□□□□□ -0.01
LMO4-202ENST00000370544 IGHV4-31P0DP07 118 aa14.96□□□□□ -0.02
LMO4-202ENST00000370544 ANKRD29Q8N6D5 301 aa14.95□□□□□ -0.02
LMO4-202ENST00000370544 IGF1P05019 195 aa14.95□□□□□ -0.02
LMO4-202ENST00000370544 Q6YL49 198 aa14.95□□□□□ -0.02
LMO4-202ENST00000370544 SMAD5-AS1Q9Y6J3 95 aa14.95□□□□□ -0.02
LMO4-202ENST00000370544 EIF4EBP1Q13541 118 aaPredicted RBP14.94□□□□□ -0.02
LMO4-202ENST00000370544 TIRAPP58753 221 aa14.94□□□□□ -0.02
LMO4-202ENST00000370544 hADV29S1A0JD25 119 aa14.93□□□□□ -0.02
LMO4-202ENST00000370544 ZNF80P51504 273 aaPredicted RBP14.93□□□□□ -0.02
LMO4-202ENST00000370544 VSIG2Q96IQ7 327 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms