RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
SSR4-202ENST00000370085 PLECQ15149 4684 aaKnown RBP9.61□□□□□ -0.87
SSR4-202ENST00000370085 GYPEP15421 78 aa9.6□□□□□ -0.87
SSR4-202ENST00000370085 SSTP61278 116 aa9.6□□□□□ -0.87
SSR4-202ENST00000370085 PNRC1Q12796 327 aaPredicted RBP9.6□□□□□ -0.87
SSR4-202ENST00000370085 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
SSR4-202ENST00000370085 SMIM15Q7Z3B0 74 aa9.6□□□□□ -0.87
SSR4-202ENST00000370085 GFRA4Q9GZZ7 299 aa9.6□□□□□ -0.87
SSR4-202ENST00000370085 A0A087WWL8 130 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 A0A096LPF7 62 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 MUC21A0A0G2JKD1 596 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 MUC21A0A140T8X8 626 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 FAM231BA6NCW3 169 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 CTRLP40313 264 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 NEGR1Q7Z3B1 354 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 SLC25A29Q8N8R3 303 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 OR10G8Q8NGN5 311 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 TSKUQ8WUA8 353 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 JPT2Q9H910 190 aa9.59□□□□□ -0.87
SSR4-202ENST00000370085 K7EQD1 137 aa9.58□□□□□ -0.88
SSR4-202ENST00000370085 RAB4BP61018 213 aa9.58□□□□□ -0.88
SSR4-202ENST00000370085 TWIST1Q15672 202 aa9.58□□□□□ -0.88
SSR4-202ENST00000370085 ZNF56Q15929 161 aa9.58□□□□□ -0.88
SSR4-202ENST00000370085 LYSTQ99698 3801 aa9.57□□□□□ -0.88
SSR4-202ENST00000370085 F5H697 171 aa9.57□□□□□ -0.88
SSR4-202ENST00000370085 PPP1R2P9O14990 202 aa9.57□□□□□ -0.88
SSR4-202ENST00000370085 CRYGDP07320 174 aa9.57□□□□□ -0.88
SSR4-202ENST00000370085 NTF3P20783 257 aa9.57□□□□□ -0.88
SSR4-202ENST00000370085 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
SSR4-202ENST00000370085 COMMD7Q86VX2 200 aa9.57□□□□□ -0.88
SSR4-202ENST00000370085 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
SSR4-202ENST00000370085 CNFNQ9BYD5 112 aa9.57□□□□□ -0.88
SSR4-202ENST00000370085 SAMD10Q9BYL1 202 aa9.57□□□□□ -0.88
SSR4-202ENST00000370085 TRBV10-1A0A0K0K1A3 114 aa9.56□□□□□ -0.88
SSR4-202ENST00000370085 H7C1H1 209 aa9.56□□□□□ -0.88
SSR4-202ENST00000370085 FOXA3P55318 350 aaPredicted RBP9.56□□□□□ -0.88
SSR4-202ENST00000370085 C14orf178Q8N769 122 aaPredicted RBP9.56□□□□□ -0.88
SSR4-202ENST00000370085 PGLYRP4Q96LB8 373 aa9.56□□□□□ -0.88
SSR4-202ENST00000370085 V9GYV3 84 aa9.56□□□□□ -0.88
SSR4-202ENST00000370085 KMT2CQ8NEZ4 4911 aaKnown RBP9.56□□□□□ -0.88
SSR4-202ENST00000370085 A0A1B0GUT8 65 aa9.55□□□□□ -0.88
SSR4-202ENST00000370085 LINC00862A6NCI5 91 aa9.55□□□□□ -0.88
SSR4-202ENST00000370085 HIGD1CA8MV81 97 aa9.55□□□□□ -0.88
SSR4-202ENST00000370085 F8W036 122 aa9.55□□□□□ -0.88
SSR4-202ENST00000370085 MT-ND4LP03901 98 aa9.55□□□□□ -0.88
SSR4-202ENST00000370085 GTSF1Q8WW33 167 aa9.55□□□□□ -0.88
SSR4-202ENST00000370085 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
SSR4-202ENST00000370085 NAT8BQ9UHF3 227 aa9.55□□□□□ -0.88
SSR4-202ENST00000370085 TMEM218A2RU14 115 aa9.54□□□□□ -0.88
SSR4-202ENST00000370085 MGPP08493 103 aa9.54□□□□□ -0.88
SSR4-202ENST00000370085 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
SSR4-202ENST00000370085 ESRGQ1W209 222 aa9.54□□□□□ -0.88
SSR4-202ENST00000370085 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
SSR4-202ENST00000370085 MRPS16Q9Y3D3 137 aaKnown RBP9.54□□□□□ -0.88
SSR4-202ENST00000370085 LINC00588Q9Y4M8 146 aa9.54□□□□□ -0.88
SSR4-202ENST00000370085 ALMS1Q8TCU4 4167 aa9.54□□□□□ -0.88
SSR4-202ENST00000370085 RIGQ13278 110 aa9.53□□□□□ -0.88
SSR4-202ENST00000370085 ATP6V0E2Q8NHE4 81 aa9.53□□□□□ -0.88
SSR4-202ENST00000370085 ANAPC16Q96DE5 110 aa9.53□□□□□ -0.88
SSR4-202ENST00000370085 UPK3BQ9BT76 320 aa9.53□□□□□ -0.88
SSR4-202ENST00000370085 SEC11CQ9BY50 192 aa9.53□□□□□ -0.88
SSR4-202ENST00000370085 MSRB1Q9NZV6 116 aa9.53□□□□□ -0.88
SSR4-202ENST00000370085 LOC100131303A0A0U1RQF7 123 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 GAGE12JA6NER3 117 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 EVI2AP22794 236 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 TIRAPP58753 221 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 GAGE1Q13065 139 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 GAGE4Q13068 117 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 GAGE5Q13069 117 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 GAGE13Q4V321 117 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 LYPD5Q6UWN5 251 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 Q6ZSN1 163 aa9.52□□□□□ -0.89
SSR4-202ENST00000370085 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
SSR4-202ENST00000370085 A0A1B0GW15 77 aa9.51□□□□□ -0.89
SSR4-202ENST00000370085 SMIM27A0A1W2PRY6 76 aa9.51□□□□□ -0.89
SSR4-202ENST00000370085 NUP35Q8NFH5 326 aa9.51□□□□□ -0.89
SSR4-202ENST00000370085 GTSF1LQ9H1H1 148 aa9.51□□□□□ -0.89
SSR4-202ENST00000370085 KIF25-AS1Q9Y6Z4 181 aa9.51□□□□□ -0.89
SSR4-202ENST00000370085 A0A087WWC5 75 aa9.5□□□□□ -0.89
SSR4-202ENST00000370085 TRAV8-6A0A0B4J262 113 aa9.5□□□□□ -0.89
SSR4-202ENST00000370085 S100A8P05109 93 aa9.5□□□□□ -0.89
SSR4-202ENST00000370085 TTC32Q5I0X7 151 aa9.5□□□□□ -0.89
SSR4-202ENST00000370085 ZNRF2Q8NHG8 242 aa9.5□□□□□ -0.89
SSR4-202ENST00000370085 DNAJC30Q96LL9 226 aa9.5□□□□□ -0.89
SSR4-202ENST00000370085 Q9H8V8 135 aa9.5□□□□□ -0.89
SSR4-202ENST00000370085 TNFRSF18Q9Y5U5 241 aa9.5□□□□□ -0.89
SSR4-202ENST00000370085 SIVA1O15304 175 aa9.49□□□□□ -0.89
SSR4-202ENST00000370085 FRZBQ92765 325 aa9.49□□□□□ -0.89
SSR4-202ENST00000370085 IGLV2-18A0A075B6J9 118 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 TRAV9-2A0A087WT02 112 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 LINC00315P59091 139 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 NDUFA5Q16718 116 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 TMEM97Q5BJF2 176 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 OR10J3Q5JRS4 329 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 LELP1Q5T871 98 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 RASL11AQ6T310 242 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 TMEM191AQ9H0A3 160 aa9.48□□□□□ -0.89
SSR4-202ENST00000370085 K7EP13 123 aa9.47□□□□□ -0.89
SSR4-202ENST00000370085 M0QY20 66 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms