RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 IGHV4-38-2P0DP08 117 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 LYZL1Q6UWQ5 148 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 IGHV3OR16-13A0A075B7E8 117 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 IGHV3-74A0A0B4J1X5 117 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 RPL13AP40429 203 aaKnown RBP11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 DSCR8Q96T75 97 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 TINCRA0A1B0GVN0 87 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 UBE2D3P61077 147 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 UBE2D2P62837 147 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 ZNF415Q09FC8 603 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 KHDC1LQ5JSQ8 128 aa11.89□□□□□ -0.51
SEMA6C-202ENST00000368912 MRPS12O15235 138 aaKnown RBP11.88□□□□□ -0.51
SEMA6C-202ENST00000368912 LMO4P61968 165 aa11.88□□□□□ -0.51
SEMA6C-202ENST00000368912 C2orf82Q6UX34 121 aa11.88□□□□□ -0.51
SEMA6C-202ENST00000368912 UPK2O00526 184 aa11.88□□□□□ -0.51
SEMA6C-202ENST00000368912 TCRAP04437 139 aa11.88□□□□□ -0.51
SEMA6C-202ENST00000368912 PIFOQ8TCI5 191 aa11.88□□□□□ -0.51
SEMA6C-202ENST00000368912 Q9H3A6 140 aa11.88□□□□□ -0.51
SEMA6C-202ENST00000368912 ORM1P02763 201 aa11.87□□□□□ -0.51
SEMA6C-202ENST00000368912 HIST2H2BDQ6DRA6 164 aa11.87□□□□□ -0.51
SEMA6C-202ENST00000368912 MLST8Q9BVC4 326 aa11.87□□□□□ -0.51
SEMA6C-202ENST00000368912 C15orf61A6NNL5 157 aa11.87□□□□□ -0.51
SEMA6C-202ENST00000368912 LGALS1P09382 135 aaKnown RBP11.86□□□□□ -0.51
SEMA6C-202ENST00000368912 BAALCQ8WXS3 180 aa11.86□□□□□ -0.51
SEMA6C-202ENST00000368912 FXYD5Q96DB9 178 aa11.86□□□□□ -0.51
SEMA6C-202ENST00000368912 FBN2P35556 2912 aa11.86□□□□□ -0.51
SEMA6C-202ENST00000368912 IGKV3-7A0A075B6H7 116 aa11.86□□□□□ -0.51
SEMA6C-202ENST00000368912 TMEM170BQ5T4T1 132 aa11.86□□□□□ -0.51
SEMA6C-202ENST00000368912 NDUFA11Q86Y39 141 aa11.86□□□□□ -0.51
SEMA6C-202ENST00000368912 IGHV3-49A0A0A0MS15 119 aa11.85□□□□□ -0.51
SEMA6C-202ENST00000368912 PLA2G2AP14555 144 aa11.85□□□□□ -0.51
SEMA6C-202ENST00000368912 C11orf44Q8N8P7 122 aa11.85□□□□□ -0.51
SEMA6C-202ENST00000368912 C10orf105Q8TEF2 133 aa11.85□□□□□ -0.51
SEMA6C-202ENST00000368912 RNF152Q8N8N0 203 aa11.85□□□□□ -0.51
SEMA6C-202ENST00000368912 WFDC11Q8NEX6 87 aa11.85□□□□□ -0.51
SEMA6C-202ENST00000368912 LINC00526Q96FQ7 95 aa11.85□□□□□ -0.51
SEMA6C-202ENST00000368912 H3BUX3 64 aa11.84□□□□□ -0.51
SEMA6C-202ENST00000368912 SLC25A16P16260 332 aa11.84□□□□□ -0.51
SEMA6C-202ENST00000368912 ZNF833PQ6ZTB9 187 aa11.84□□□□□ -0.51
SEMA6C-202ENST00000368912 Q86TA4 180 aa11.84□□□□□ -0.51
SEMA6C-202ENST00000368912 MSMBP08118 114 aa11.84□□□□□ -0.51
SEMA6C-202ENST00000368912 MYCNOSP40205 109 aa11.84□□□□□ -0.51
SEMA6C-202ENST00000368912 DLX6P56179 175 aa11.84□□□□□ -0.51
SEMA6C-202ENST00000368912 PRO1854Q9UHT4 67 aa11.84□□□□□ -0.51
SEMA6C-202ENST00000368912 V9GYY9 64 aa11.84□□□□□ -0.51
SEMA6C-202ENST00000368912 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.51
SEMA6C-202ENST00000368912 C2orf83Q53S99 150 aa11.83□□□□□ -0.51
SEMA6C-202ENST00000368912 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.51
SEMA6C-202ENST00000368912 F8P00451 2351 aa11.83□□□□□ -0.52
SEMA6C-202ENST00000368912 SUB1P53999 127 aaKnown RBP eCLIP11.83□□□□□ -0.52
SEMA6C-202ENST00000368912 KLHL30-AS1Q8NEE0 82 aa11.83□□□□□ -0.52
SEMA6C-202ENST00000368912 M0R2P5 195 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 LGALS9O00182 355 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 LINC01620Q4KN68 170 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 PLEKHB2Q96CS7 222 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 G3V318 75 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 NBR2O15453 112 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 IGLV1-47P01700 117 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 IGHV3-11P01762 117 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 PLNP26678 52 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 LYZP61626 148 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 WT1-ASQ06250 92 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 ATXN8Q156A1 80 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 SBSPONQ8IVN8 264 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 ZMAT4Q9H898 229 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 JPT2Q9H910 190 aa11.82□□□□□ -0.52
SEMA6C-202ENST00000368912 UBR5O95071 2799 aaPredicted RBP11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 NF1P21359 2839 aa11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 IGHV3-66A0A0C4DH42 116 aa11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 B4DSR2 109 aa11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 GATA1P15976 413 aaPredicted RBP11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 UBE2D1P51668 147 aa11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 RPS28P62857 69 aaKnown RBP11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 VPS13CQ709C8 3753 aa11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 AVPP01185 164 aa11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
SEMA6C-202ENST00000368912 A0A0U1RQV1 116 aa11.8□□□□□ -0.52
SEMA6C-202ENST00000368912 CD69Q07108 199 aa11.8□□□□□ -0.52
SEMA6C-202ENST00000368912 TET2Q6N021 2002 aaPredicted RBP11.8□□□□□ -0.52
SEMA6C-202ENST00000368912 INS-IGF2F8WCM5 200 aa11.8□□□□□ -0.52
SEMA6C-202ENST00000368912 HLA-DMBP28068 263 aa11.8□□□□□ -0.52
SEMA6C-202ENST00000368912 PATE2Q6UY27 113 aa11.8□□□□□ -0.52
SEMA6C-202ENST00000368912 OVOL3O00110 214 aa11.79□□□□□ -0.52
SEMA6C-202ENST00000368912 IGHG4P01861 327 aa11.79□□□□□ -0.52
SEMA6C-202ENST00000368912 RS1O15537 224 aa11.79□□□□□ -0.52
SEMA6C-202ENST00000368912 DEFB113Q30KQ7 82 aa11.79□□□□□ -0.52
SEMA6C-202ENST00000368912 NSUN5P1Q3KNT7 163 aa11.79□□□□□ -0.52
SEMA6C-202ENST00000368912 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
SEMA6C-202ENST00000368912 M0R1W7 72 aa11.79□□□□□ -0.52
SEMA6C-202ENST00000368912 PRCDQ00LT1 54 aa11.79□□□□□ -0.52
SEMA6C-202ENST00000368912 TRAV13-1A0A0B4J241 112 aa11.78□□□□□ -0.52
SEMA6C-202ENST00000368912 M0R3E3 92 aa11.78□□□□□ -0.52
SEMA6C-202ENST00000368912 EIF4EBP1Q13541 118 aaPredicted RBP11.78□□□□□ -0.52
SEMA6C-202ENST00000368912 FOXA2Q9Y261 457 aaPredicted RBP11.78□□□□□ -0.52
SEMA6C-202ENST00000368912 H7C1H1 209 aa11.78□□□□□ -0.52
SEMA6C-202ENST00000368912 CFC1BP0CG36 223 aa11.78□□□□□ -0.52
SEMA6C-202ENST00000368912 CFC1P0CG37 223 aa11.78□□□□□ -0.52
SEMA6C-202ENST00000368912 COX7CP15954 63 aa11.78□□□□□ -0.52
SEMA6C-202ENST00000368912 RPL11P62913 178 aaKnown RBP11.78□□□□□ -0.52
SEMA6C-202ENST00000368912 DPH3Q96FX2 82 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms