RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 FABP5P3A8MUU1 101 aa8.08□□□□□ -1.12
TPM3-212ENST00000368533 EVI2AP22794 236 aa8.08□□□□□ -1.12
TPM3-212ENST00000368533 LGALS9BQ3B8N2 356 aa8.08□□□□□ -1.12
TPM3-212ENST00000368533 LGALS9CQ6DKI2 356 aa8.08□□□□□ -1.12
TPM3-212ENST00000368533 FAM223AQ8IWN6 122 aa8.08□□□□□ -1.12
TPM3-212ENST00000368533 BUB3O43684 328 aa8.08□□□□□ -1.12
TPM3-212ENST00000368533 NPYP01303 97 aa8.08□□□□□ -1.12
TPM3-212ENST00000368533 FOXC2Q99958 501 aa8.08□□□□□ -1.12
TPM3-212ENST00000368533 IGLV1-40P01703 118 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 Q6ZUT4 128 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 PRO0461Q9UI25 63 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 TRBV20-1A0A075B6N2 111 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 PSMB8P28062 276 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 SYNJ2BPP57105 145 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 FOXI1Q12951 378 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 MAPKAPK5-AS1Q8N8E1 139 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 TM2D2Q9BX73 214 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 SIVA1O15304 175 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 GAS8-AS1O95177 125 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 C12orf74Q32Q52 190 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 CEND1Q8N111 149 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 ERG28Q9UKR5 140 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 CYSLTR1Q9Y271 337 aa8.07□□□□□ -1.12
TPM3-212ENST00000368533 TRBV7-9A0A0J9YWB2 115 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 LY6G6DO95868 133 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 CFHR3Q02985 330 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 TMEM78Q5T7P6 136 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 KIR2DL4Q99706 377 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 ATRQ13535 2644 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 IGHV4OR15-8A0A075B7B6 117 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 A0A087WW49 117 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 BRI3O95415 125 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 IGHG4P01861 327 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 PRSS1P07477 247 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 SMCPP49901 116 aaPredicted RBP8.06□□□□□ -1.12
TPM3-212ENST00000368533 ZNF493Q6ZR52 646 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 TMEM190Q8WZ59 177 aa8.06□□□□□ -1.12
TPM3-212ENST00000368533 INAFM1C9JVW0 142 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 HBDP02042 147 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 Q6ZSV7 163 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 C1QTNF4Q9BXJ3 329 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 TMEM160Q9NX00 188 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 F6UB75 175 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 GATA1P15976 413 aaPredicted RBP8.05□□□□□ -1.12
TPM3-212ENST00000368533 CRIP2P52943 208 aaPredicted RBP8.05□□□□□ -1.12
TPM3-212ENST00000368533 SLURP1P55000 103 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 ZC2HC1BQ5TFG8 222 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 C9orf139Q6ZV77 190 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 C3orf56Q8N813 242 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 C16orf92Q96LL3 132 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 MAP1LC3AQ9H492 121 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 TENM1Q9UKZ4 2725 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 DPF1Q92782 380 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 USMG5Q96IX5 58 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 AGPAT4-IT1Q9H0P7 198 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 HHLA3Q9XRX5 114 aa8.05□□□□□ -1.12
TPM3-212ENST00000368533 GAGE5Q13069 117 aa8.04□□□□□ -1.12
TPM3-212ENST00000368533 GAGE6Q13070 117 aa8.04□□□□□ -1.12
TPM3-212ENST00000368533 Q6ZQT7 251 aa8.04□□□□□ -1.12
TPM3-212ENST00000368533 HIST1H4GQ99525 98 aa8.04□□□□□ -1.12
TPM3-212ENST00000368533 RHPN1-AS1Q9BWJ2 59 aa8.04□□□□□ -1.12
TPM3-212ENST00000368533 OR11H12B2RN74 326 aa8.04□□□□□ -1.12
TPM3-212ENST00000368533 LEPP41159 167 aa8.04□□□□□ -1.12
TPM3-212ENST00000368533 OR11H1Q8NG94 326 aa8.04□□□□□ -1.12
TPM3-212ENST00000368533 OR11H2Q8NH07 326 aa8.04□□□□□ -1.12
TPM3-212ENST00000368533 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 ZFP2Q6ZN57 461 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 VWFP04275 2813 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 CCDC179H3BU77 68 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 PSMB2P49721 201 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 SPANXN1Q5VSR9 72 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 SLC50A1Q9BRV3 221 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 IGKV3-20P01619 116 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 IGLC6P0CF74 106 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 GATD1Q8NB37 220 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 C20orf173Q96LM9 149 aa8.03□□□□□ -1.12
TPM3-212ENST00000368533 SPRY2O43597 315 aa8.02□□□□□ -1.13
TPM3-212ENST00000368533 TNFRSF6BO95407 300 aa8.02□□□□□ -1.13
TPM3-212ENST00000368533 KLHL30-AS1Q8NEE0 82 aa8.02□□□□□ -1.13
TPM3-212ENST00000368533 TRAV26-2A0A0B4J265 109 aa8.02□□□□□ -1.13
TPM3-212ENST00000368533 H3BVH4 76 aa8.02□□□□□ -1.13
TPM3-212ENST00000368533 NDUFA4O00483 81 aa8.02□□□□□ -1.13
TPM3-212ENST00000368533 NHLRC4P0CG21 123 aaPredicted RBP8.02□□□□□ -1.13
TPM3-212ENST00000368533 HOXD3P31249 432 aaPredicted RBP8.02□□□□□ -1.13
TPM3-212ENST00000368533 RPL32P62910 135 aaKnown RBP8.02□□□□□ -1.13
TPM3-212ENST00000368533 RRN3P1Q2M238 152 aa8.02□□□□□ -1.13
TPM3-212ENST00000368533 CARD19Q96LW7 228 aa8.02□□□□□ -1.13
TPM3-212ENST00000368533 U3KQK5 164 aa8.02□□□□□ -1.13
TPM3-212ENST00000368533 TRAV8-2A0A0B4J237 113 aa8.01□□□□□ -1.13
TPM3-212ENST00000368533 ODF1Q14990 250 aa8.01□□□□□ -1.13
TPM3-212ENST00000368533 IGKV3D-20A0A0C4DH25 116 aa8.01□□□□□ -1.13
TPM3-212ENST00000368533 DAZ1Q9NQZ3 744 aaKnown RBP8.01□□□□□ -1.13
TPM3-212ENST00000368533 C11orf21Q9P2W6 132 aa8.01□□□□□ -1.13
TPM3-212ENST00000368533 CD28P10747 220 aa8□□□□□ -1.13
TPM3-212ENST00000368533 S100A4P26447 101 aaKnown RBP8□□□□□ -1.13
TPM3-212ENST00000368533 GPHB5Q86YW7 130 aa8□□□□□ -1.13
TPM3-212ENST00000368533 H3BUA1 57 aa8□□□□□ -1.13
TPM3-212ENST00000368533 IGKCP01834 107 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms