RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 C18orf15Q96N68 181 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 MDFICQ9P1T7 246 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 NAGKQ9UJ70 344 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 IGHV3-16A0A0C4DH30 117 aa13.22□□□□□ -0.29
LMNA-204ENST00000368298 GNRH2O43555 120 aa13.22□□□□□ -0.29
LMNA-204ENST00000368298 SPXQ9BT56 116 aa13.22□□□□□ -0.29
LMNA-204ENST00000368298 GRIFINA4D1Z8 144 aa13.21□□□□□ -0.3
LMNA-204ENST00000368298 TCTAP57738 103 aa13.21□□□□□ -0.3
LMNA-204ENST00000368298 RIGQ13278 110 aa13.21□□□□□ -0.3
LMNA-204ENST00000368298 RYR3Q15413 4870 aa13.21□□□□□ -0.3
LMNA-204ENST00000368298 A0A1B0GUT8 65 aa13.2□□□□□ -0.3
LMNA-204ENST00000368298 SLAQ13239 276 aa13.2□□□□□ -0.3
LMNA-204ENST00000368298 Q6ZTI0 123 aa13.2□□□□□ -0.3
LMNA-204ENST00000368298 SSBP4Q9BWG4 385 aaPredicted RBP13.2□□□□□ -0.3
LMNA-204ENST00000368298 IGKV3D-20A0A0C4DH25 116 aa13.19□□□□□ -0.3
LMNA-204ENST00000368298 ORM1P02763 201 aa13.19□□□□□ -0.3
LMNA-204ENST00000368298 ATP5G1P05496 136 aa13.19□□□□□ -0.3
LMNA-204ENST00000368298 ARMS2P0C7Q2 107 aa13.19□□□□□ -0.3
LMNA-204ENST00000368298 BORCS7Q96B45 105 aa13.19□□□□□ -0.3
LMNA-204ENST00000368298 GAGE12BA1L429 117 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 GAGE7O76087 117 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 GAGE12FP0CL80 117 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 GAGE12GP0CL81 117 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 GAGE12IP0CL82 117 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 FABP4P15090 132 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 SRIP30626 198 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 Q0VG73 95 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 LINC01559Q495D7 138 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 DNLZQ5SXM8 178 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 RASL10AQ92737 203 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 TPPP3Q9BW30 176 aa13.18□□□□□ -0.3
LMNA-204ENST00000368298 DYNC2H1Q8NCM8 4307 aaKnown RBP13.18□□□□□ -0.3
LMNA-204ENST00000368298 LYZL1Q6UWQ5 148 aa13.17□□□□□ -0.3
LMNA-204ENST00000368298 ZNF575Q86XF7 245 aa13.17□□□□□ -0.3
LMNA-204ENST00000368298 OR10D4PQ8NGN7 298 aa13.17□□□□□ -0.3
LMNA-204ENST00000368298 HIST1H2BLQ99880 126 aa13.17□□□□□ -0.3
LMNA-204ENST00000368298 TRGV1A0A0A0MS02 117 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 A0A1B0GW15 77 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 IGLL5B9A064 214 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 SMIM6P0DI80 62 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 FER1L6-AS1Q8NA97 138 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 C9orf85Q96MD7 179 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 APLNQ9ULZ1 77 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 M0R2P5 195 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 RNASE3P12724 160 aaKnown RBP13.16□□□□□ -0.3
LMNA-204ENST00000368298 OR10J3Q5JRS4 329 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 BAGE3Q86Y29 109 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 GATD1Q8NB37 220 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 PTH2Q96A98 100 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 C12orf57Q99622 126 aa13.16□□□□□ -0.3
LMNA-204ENST00000368298 F2Z2F3 143 aa13.15□□□□□ -0.3
LMNA-204ENST00000368298 IGLC6P0CF74 106 aa13.15□□□□□ -0.3
LMNA-204ENST00000368298 CTRLP40313 264 aa13.15□□□□□ -0.3
LMNA-204ENST00000368298 MRPL16Q9NX20 251 aaKnown RBP13.15□□□□□ -0.3
LMNA-204ENST00000368298 TRGV2A0A075B6R0 118 aa13.14□□□□□ -0.31
LMNA-204ENST00000368298 NUPR1O60356 82 aa13.14□□□□□ -0.31
LMNA-204ENST00000368298 HTN3P15516 51 aa13.14□□□□□ -0.31
LMNA-204ENST00000368298 TMEM18Q96B42 140 aa13.14□□□□□ -0.31
LMNA-204ENST00000368298 PACRGQ96M98 296 aaPredicted RBP13.14□□□□□ -0.31
LMNA-204ENST00000368298 NDUFAF3Q9BU61 184 aa13.14□□□□□ -0.31
LMNA-204ENST00000368298 SERF1AO75920 110 aa13.13□□□□□ -0.31
LMNA-204ENST00000368298 ASIPP42127 132 aa13.13□□□□□ -0.31
LMNA-204ENST00000368298 LINC00310P59036 64 aa13.13□□□□□ -0.31
LMNA-204ENST00000368298 ALKBH7Q9BT30 221 aaPredicted RBP13.13□□□□□ -0.31
LMNA-204ENST00000368298 F5H768 121 aa13.12□□□□□ -0.31
LMNA-204ENST00000368298 MUC4Q99102 2169 aa13.12□□□□□ -0.31
LMNA-204ENST00000368298 LCE6AA0A183 80 aa13.11□□□□□ -0.31
LMNA-204ENST00000368298 ESDP10768 282 aa13.11□□□□□ -0.31
LMNA-204ENST00000368298 IQCJQ1A5X6 159 aa13.11□□□□□ -0.31
LMNA-204ENST00000368298 PIK3CD-AS1Q5SR53 167 aa13.11□□□□□ -0.31
LMNA-204ENST00000368298 C18orf32Q8TCD1 76 aa13.11□□□□□ -0.31
LMNA-204ENST00000368298 SACSQ9NZJ4 4579 aa13.11□□□□□ -0.31
LMNA-204ENST00000368298 MUC21A0A0G2JKD1 596 aa13.1□□□□□ -0.31
LMNA-204ENST00000368298 MUC21A0A140T8X8 626 aa13.1□□□□□ -0.31
LMNA-204ENST00000368298 S100A4P26447 101 aaKnown RBP13.1□□□□□ -0.31
LMNA-204ENST00000368298 SSTP61278 116 aa13.1□□□□□ -0.31
LMNA-204ENST00000368298 H3BNG1 76 aa13.1□□□□□ -0.31
LMNA-204ENST00000368298 ZNF876PQ49A33 203 aa13.1□□□□□ -0.31
LMNA-204ENST00000368298 POM121L12Q8N7R1 296 aa13.1□□□□□ -0.31
LMNA-204ENST00000368298 C15orf53Q8NAA6 179 aa13.1□□□□□ -0.31
LMNA-204ENST00000368298 LYSTQ99698 3801 aa13.1□□□□□ -0.31
LMNA-204ENST00000368298 SCRT2Q9NQ03 307 aa13.1□□□□□ -0.31
LMNA-204ENST00000368298 PLECQ15149 4684 aaKnown RBP13.09□□□□□ -0.31
LMNA-204ENST00000368298 MED14OSP0DP75 135 aa13.09□□□□□ -0.31
LMNA-204ENST00000368298 CNFNQ9BYD5 112 aa13.09□□□□□ -0.31
LMNA-204ENST00000368298 TRAV4A0A0B4J268 109 aa13.08□□□□□ -0.32
LMNA-204ENST00000368298 TWIST1Q15672 202 aa13.08□□□□□ -0.32
LMNA-204ENST00000368298 PYY3Q5JQD4 70 aa13.08□□□□□ -0.32
LMNA-204ENST00000368298 LGALS9CQ6DKI2 356 aa13.08□□□□□ -0.32
LMNA-204ENST00000368298 LINC00476Q8WZB0 136 aa13.08□□□□□ -0.32
LMNA-204ENST00000368298 CIDEAO60543 219 aa13.07□□□□□ -0.32
LMNA-204ENST00000368298 FHL2Q14192 279 aa13.07□□□□□ -0.32
LMNA-204ENST00000368298 RYR2Q92736 4967 aa13.06□□□□□ -0.32
LMNA-204ENST00000368298 H3BVH4 76 aa13.06□□□□□ -0.32
LMNA-204ENST00000368298 NTF3P20783 257 aa13.06□□□□□ -0.32
LMNA-204ENST00000368298 ZNF479Q96JC4 524 aa13.06□□□□□ -0.32
LMNA-204ENST00000368298 SAMD10Q9BYL1 202 aa13.06□□□□□ -0.32
LMNA-204ENST00000368298 ALMS1Q8TCU4 4167 aa13.06□□□□□ -0.32
LMNA-204ENST00000368298 TRAV26-1A0A087WT03 109 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms