RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 OR2D3Q8NGH3 330 aa10.03□□□□□ -0.8
SF3B5-201ENST00000367569 PTH2Q96A98 100 aa10.03□□□□□ -0.8
SF3B5-201ENST00000367569 DNAH5Q8TE73 4624 aa10.03□□□□□ -0.8
SF3B5-201ENST00000367569 K7EN84 100 aa10.02□□□□□ -0.81
SF3B5-201ENST00000367569 SIVA1O15304 175 aa10.02□□□□□ -0.81
SF3B5-201ENST00000367569 TNP2Q05952 138 aa10.02□□□□□ -0.81
SF3B5-201ENST00000367569 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
SF3B5-201ENST00000367569 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.81
SF3B5-201ENST00000367569 TRBV6-4A0A1B0GX49 114 aa10.01□□□□□ -0.81
SF3B5-201ENST00000367569 C19orf71A6NCJ1 209 aa10.01□□□□□ -0.81
SF3B5-201ENST00000367569 C6orf223Q8N319 242 aa10.01□□□□□ -0.81
SF3B5-201ENST00000367569 LYPD6BQ8NI32 183 aa10.01□□□□□ -0.81
SF3B5-201ENST00000367569 DAZAP1Q96EP5 407 aaKnown RBP10.01□□□□□ -0.81
SF3B5-201ENST00000367569 SFRP2Q96HF1 295 aa10.01□□□□□ -0.81
SF3B5-201ENST00000367569 KRTAP4-5Q9BYR2 181 aa10.01□□□□□ -0.81
SF3B5-201ENST00000367569 EIF5A2Q9GZV4 153 aaKnown RBP10.01□□□□□ -0.81
SF3B5-201ENST00000367569 RNASE7Q9H1E1 156 aaKnown RBP10.01□□□□□ -0.81
SF3B5-201ENST00000367569 P01737 135 aa10□□□□□ -0.81
SF3B5-201ENST00000367569 TAGLN2P37802 199 aaKnown RBP10□□□□□ -0.81
SF3B5-201ENST00000367569 ZNF56Q15929 161 aa10□□□□□ -0.81
SF3B5-201ENST00000367569 SPANXN1Q5VSR9 72 aa10□□□□□ -0.81
SF3B5-201ENST00000367569 APOBP04114 4563 aaKnown RBP10□□□□□ -0.81
SF3B5-201ENST00000367569 SNAI2O43623 268 aa9.99□□□□□ -0.81
SF3B5-201ENST00000367569 CRYGDP07320 174 aa9.99□□□□□ -0.81
SF3B5-201ENST00000367569 CXCL1P09341 107 aa9.99□□□□□ -0.81
SF3B5-201ENST00000367569 LINC00315P59091 139 aa9.99□□□□□ -0.81
SF3B5-201ENST00000367569 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
SF3B5-201ENST00000367569 ZFP2Q6ZN57 461 aa9.99□□□□□ -0.81
SF3B5-201ENST00000367569 OCC1Q8TAD7 63 aa9.99□□□□□ -0.81
SF3B5-201ENST00000367569 FAM210AQ96ND0 272 aa9.99□□□□□ -0.81
SF3B5-201ENST00000367569 TNFRSF18Q9Y5U5 241 aa9.99□□□□□ -0.81
SF3B5-201ENST00000367569 RHODO00212 210 aa9.98□□□□□ -0.81
SF3B5-201ENST00000367569 IGLC6P0CF74 106 aa9.98□□□□□ -0.81
SF3B5-201ENST00000367569 LINC00694P0DN24 101 aa9.98□□□□□ -0.81
SF3B5-201ENST00000367569 TEX261Q6UWH6 196 aa9.98□□□□□ -0.81
SF3B5-201ENST00000367569 Q8N3U1 123 aa9.98□□□□□ -0.81
SF3B5-201ENST00000367569 FER1L6-AS1Q8NA97 138 aa9.98□□□□□ -0.81
SF3B5-201ENST00000367569 NUDT10Q8NFP7 164 aa9.98□□□□□ -0.81
SF3B5-201ENST00000367569 NUDT11Q96G61 164 aa9.98□□□□□ -0.81
SF3B5-201ENST00000367569 MSRB1Q9NZV6 116 aa9.98□□□□□ -0.81
SF3B5-201ENST00000367569 TMEM250H0YL14 139 aa9.97□□□□□ -0.81
SF3B5-201ENST00000367569 MGPP08493 103 aa9.97□□□□□ -0.81
SF3B5-201ENST00000367569 OR5AL1P0C617 328 aa9.97□□□□□ -0.81
SF3B5-201ENST00000367569 OR10J3Q5JRS4 329 aa9.97□□□□□ -0.81
SF3B5-201ENST00000367569 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
SF3B5-201ENST00000367569 ATP6V0E2Q8NHE4 81 aa9.97□□□□□ -0.81
SF3B5-201ENST00000367569 SMIM12Q96EX1 92 aa9.97□□□□□ -0.81
SF3B5-201ENST00000367569 SMIM7Q9BQ49 75 aa9.97□□□□□ -0.81
SF3B5-201ENST00000367569 C16orf90A8MZG2 172 aa9.96□□□□□ -0.82
SF3B5-201ENST00000367569 CIDEAO60543 219 aa9.96□□□□□ -0.82
SF3B5-201ENST00000367569 SRP19P09132 144 aaKnown RBP9.96□□□□□ -0.82
SF3B5-201ENST00000367569 SRSF3P84103 164 aaKnown RBP9.96□□□□□ -0.82
SF3B5-201ENST00000367569 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.82
SF3B5-201ENST00000367569 RPP21Q9H633 154 aaKnown RBP9.96□□□□□ -0.82
SF3B5-201ENST00000367569 LY96Q9Y6Y9 160 aa9.96□□□□□ -0.82
SF3B5-201ENST00000367569 IGHV3-30P01768 117 aa9.95□□□□□ -0.82
SF3B5-201ENST00000367569 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
SF3B5-201ENST00000367569 IGHV3-30-3P0DP02 117 aa9.95□□□□□ -0.82
SF3B5-201ENST00000367569 IGHV3-30-5P0DP03 117 aa9.95□□□□□ -0.82
SF3B5-201ENST00000367569 RPS20P60866 119 aaKnown RBP9.95□□□□□ -0.82
SF3B5-201ENST00000367569 LYZL1Q6UWQ5 148 aa9.95□□□□□ -0.82
SF3B5-201ENST00000367569 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
SF3B5-201ENST00000367569 C9JQL5 133 aa9.94□□□□□ -0.82
SF3B5-201ENST00000367569 F5H697 171 aa9.94□□□□□ -0.82
SF3B5-201ENST00000367569 GTSF1LQ9H1H1 148 aa9.94□□□□□ -0.82
SF3B5-201ENST00000367569 IGHV3-38A0A0C4DH36 116 aa9.93□□□□□ -0.82
SF3B5-201ENST00000367569 ZNF727A8MUV8 499 aa9.93□□□□□ -0.82
SF3B5-201ENST00000367569 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
SF3B5-201ENST00000367569 BIN3Q9NQY0 253 aa9.93□□□□□ -0.82
SF3B5-201ENST00000367569 TRAV8-6A0A0B4J262 113 aa9.92□□□□□ -0.82
SF3B5-201ENST00000367569 A0A1W2PPQ1 181 aa9.92□□□□□ -0.82
SF3B5-201ENST00000367569 XKRY2A2RUG3 117 aa9.92□□□□□ -0.82
SF3B5-201ENST00000367569 GATCO43716 136 aaKnown RBP9.92□□□□□ -0.82
SF3B5-201ENST00000367569 DNAH10OSP0CZ25 163 aa9.92□□□□□ -0.82
SF3B5-201ENST00000367569 SMIM17P0DL12 118 aa9.92□□□□□ -0.82
SF3B5-201ENST00000367569 LELP1Q5T871 98 aa9.92□□□□□ -0.82
SF3B5-201ENST00000367569 NEXN-AS1Q8NBZ9 246 aa9.92□□□□□ -0.82
SF3B5-201ENST00000367569 GTSF1Q8WW33 167 aa9.92□□□□□ -0.82
SF3B5-201ENST00000367569 KIF25-AS1Q9Y6Z4 181 aa9.92□□□□□ -0.82
SF3B5-201ENST00000367569 CDK2AP2O75956 126 aa9.91□□□□□ -0.82
SF3B5-201ENST00000367569 EVI2AP22794 236 aa9.91□□□□□ -0.82
SF3B5-201ENST00000367569 FUSP35637 526 aaKnown RBP eCLIP9.91□□□□□ -0.82
SF3B5-201ENST00000367569 CTRLP40313 264 aa9.91□□□□□ -0.82
SF3B5-201ENST00000367569 TIRAPP58753 221 aa9.91□□□□□ -0.82
SF3B5-201ENST00000367569 Q9HAA7 133 aa9.91□□□□□ -0.82
SF3B5-201ENST00000367569 ERVFC1-1P60608 527 aa9.9□□□□□ -0.82
SF3B5-201ENST00000367569 RAB4BP61018 213 aa9.9□□□□□ -0.82
SF3B5-201ENST00000367569 CACNG7P62955 275 aa9.9□□□□□ -0.82
SF3B5-201ENST00000367569 RPL36AP83881 106 aaKnown RBP9.9□□□□□ -0.82
SF3B5-201ENST00000367569 SUMO4Q6EEV6 95 aa9.9□□□□□ -0.82
SF3B5-201ENST00000367569 Q6ZRN7 208 aaPredicted RBP9.9□□□□□ -0.82
SF3B5-201ENST00000367569 LINC01551Q86U37 167 aa9.9□□□□□ -0.82
SF3B5-201ENST00000367569 DEFB104AQ8WTQ1 72 aa9.9□□□□□ -0.82
SF3B5-201ENST00000367569 RPL36ALQ969Q0 106 aaKnown RBP9.9□□□□□ -0.82
SF3B5-201ENST00000367569 NTF3P20783 257 aa9.89□□□□□ -0.83
SF3B5-201ENST00000367569 UBE2D3P61077 147 aa9.89□□□□□ -0.83
SF3B5-201ENST00000367569 UBE2D2P62837 147 aa9.89□□□□□ -0.83
SF3B5-201ENST00000367569 TWIST1Q15672 202 aa9.89□□□□□ -0.83
SF3B5-201ENST00000367569 ADIRFQ15847 76 aa9.89□□□□□ -0.83
SF3B5-201ENST00000367569 SPATA12Q7Z6I5 190 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms