RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CDIP1Q9H305 208 aa10.25□□□□□ -0.77
PRKN-205ENST00000366897 SCGB1A1P11684 91 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 COX6B1P14854 86 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 OR10J6PQ8NGY7 276 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 OOSP1A8MZH6 123 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 EDN2P20800 178 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 C11orf71Q6IPW1 123 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 ITLN2Q8WWU7 325 aaPredicted RBP10.24□□□□□ -0.77
PRKN-205ENST00000366897 CSMD2Q7Z408 3487 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 TRAV21A0A0B4J279 112 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 CENPVL3A0A0U1RRI6 287 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 RNASE3P12724 160 aaKnown RBP10.24□□□□□ -0.77
PRKN-205ENST00000366897 TMEM170BQ5T4T1 132 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 CFAP161Q6P656 301 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 OPRPNQ99935 248 aaPredicted RBP10.24□□□□□ -0.77
PRKN-205ENST00000366897 U3KQE9 123 aa10.24□□□□□ -0.77
PRKN-205ENST00000366897 CUBNO60494 3623 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 IGLV4-69A0A075B6H9 119 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 IGHV3-64A0A075B6Q5 118 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 F5H697 171 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 H7C2G1 150 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 UBE2D1P51668 147 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 KIR2DL4Q99706 377 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 UBTD1Q9HAC8 227 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 TRAV26-1A0A087WT03 109 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 TCL1BO95988 128 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 CD7P09564 240 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 CARD19Q96LW7 228 aa10.23□□□□□ -0.77
PRKN-205ENST00000366897 TRBV7-1A0A0A6YYK4 115 aa10.22□□□□□ -0.77
PRKN-205ENST00000366897 XGP55808 180 aa10.22□□□□□ -0.77
PRKN-205ENST00000366897 ADORA2A-AS1P86434 159 aa10.22□□□□□ -0.77
PRKN-205ENST00000366897 FAM74A4Q5TZK3 123 aa10.22□□□□□ -0.77
PRKN-205ENST00000366897 BRD3OSQ6XYD6 125 aa10.22□□□□□ -0.77
PRKN-205ENST00000366897 C9orf139Q6ZV77 190 aa10.22□□□□□ -0.77
PRKN-205ENST00000366897 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
PRKN-205ENST00000366897 A0A0J9YY99 117 aa10.22□□□□□ -0.77
PRKN-205ENST00000366897 HIST2H2BCQ6DN03 193 aa10.22□□□□□ -0.77
PRKN-205ENST00000366897 C1orf122Q6ZSJ8 110 aa10.22□□□□□ -0.77
PRKN-205ENST00000366897 TRAV41A0A0B4J266 112 aa10.21□□□□□ -0.77
PRKN-205ENST00000366897 A6NJY4 79 aa10.21□□□□□ -0.77
PRKN-205ENST00000366897 UBE2E1P51965 193 aa10.21□□□□□ -0.77
PRKN-205ENST00000366897 NDUFA11Q86Y39 141 aa10.21□□□□□ -0.77
PRKN-205ENST00000366897 C5orf56Q8N8D9 126 aa10.21□□□□□ -0.77
PRKN-205ENST00000366897 RAX2Q96IS3 184 aa10.21□□□□□ -0.77
PRKN-205ENST00000366897 ABCA2Q9BZC7 2435 aa10.21□□□□□ -0.77
PRKN-205ENST00000366897 LY6EQ16553 131 aa10.21□□□□□ -0.78
PRKN-205ENST00000366897 ZNF256Q9Y2P7 627 aaPredicted RBP10.21□□□□□ -0.78
PRKN-205ENST00000366897 LINC00477Q96M19 166 aa10.2□□□□□ -0.78
PRKN-205ENST00000366897 BPESC1Q9GZL8 116 aa10.2□□□□□ -0.78
PRKN-205ENST00000366897 LINC01619G3V211 115 aa10.2□□□□□ -0.78
PRKN-205ENST00000366897 IGKV3-20P01619 116 aa10.2□□□□□ -0.78
PRKN-205ENST00000366897 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
PRKN-205ENST00000366897 CFC1P0CG37 223 aa10.2□□□□□ -0.78
PRKN-205ENST00000366897 SCGB1C2P0DMR2 95 aa10.2□□□□□ -0.78
PRKN-205ENST00000366897 ZNRF2Q8NHG8 242 aa10.2□□□□□ -0.78
PRKN-205ENST00000366897 GEMIN7Q9H840 131 aaKnown RBP10.2□□□□□ -0.78
PRKN-205ENST00000366897 UNC79Q9P2D8 2635 aa10.2□□□□□ -0.78
PRKN-205ENST00000366897 NPFFO15130 113 aa10.19□□□□□ -0.78
PRKN-205ENST00000366897 UBE2D3P61077 147 aa10.19□□□□□ -0.78
PRKN-205ENST00000366897 UBE2D2P62837 147 aa10.19□□□□□ -0.78
PRKN-205ENST00000366897 SUMO4Q6EEV6 95 aa10.19□□□□□ -0.78
PRKN-205ENST00000366897 LINC00315P59091 139 aa10.19□□□□□ -0.78
PRKN-205ENST00000366897 NOTCH2Q04721 2471 aa10.18□□□□□ -0.78
PRKN-205ENST00000366897 IGIPA6NJ69 53 aa10.18□□□□□ -0.78
PRKN-205ENST00000366897 CYSRT1A8MQ03 144 aa10.18□□□□□ -0.78
PRKN-205ENST00000366897 CRIP2P52943 208 aaPredicted RBP10.18□□□□□ -0.78
PRKN-205ENST00000366897 Q6ZUT4 128 aa10.18□□□□□ -0.78
PRKN-205ENST00000366897 NAV2Q8IVL1 2488 aa10.18□□□□□ -0.78
PRKN-205ENST00000366897 TRAV12-3A0A0B4J271 114 aa10.18□□□□□ -0.78
PRKN-205ENST00000366897 SOCS3O14543 225 aa10.18□□□□□ -0.78
PRKN-205ENST00000366897 MAST4O15021 2626 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 CRYBA4P53673 196 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 FBXL19-AS1Q494R0 122 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 ZNF580Q9UK33 172 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 SDHAF1A6NFY7 115 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 IGHV3-30P01768 117 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 IGHV3-30-5P0DP03 117 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 GATA3P23771 443 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 PMVKQ15126 192 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 TRPT1Q86TN4 253 aaKnown RBP10.17□□□□□ -0.78
PRKN-205ENST00000366897 ANKRD29Q8N6D5 301 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 ITPR2Q14571 2701 aa10.17□□□□□ -0.78
PRKN-205ENST00000366897 OVOL1O14753 267 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 HERVK_113P61574 105 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 KIF25-AS1Q9Y6Z4 181 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 TRAV12-2A0A075B6T6 113 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 ADARB2-AS1A8MUL3 147 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 PF4V1P10720 104 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 RHPN1-AS1Q9BWJ2 59 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 LENEPQ9Y5L5 61 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 EIF4EBP3O60516 100 aaPredicted RBP10.16□□□□□ -0.78
PRKN-205ENST00000366897 TCTEX1D4Q5JR98 221 aa10.16□□□□□ -0.78
PRKN-205ENST00000366897 TRAV2A0A0B4J234 112 aa10.15□□□□□ -0.78
PRKN-205ENST00000366897 LMO4P61968 165 aa10.15□□□□□ -0.78
PRKN-205ENST00000366897 PPDPFLQ8WWR9 84 aa10.15□□□□□ -0.78
PRKN-205ENST00000366897 A4D1N5 150 aa10.15□□□□□ -0.79
PRKN-205ENST00000366897 J3QQQ9 107 aa10.15□□□□□ -0.79
PRKN-205ENST00000366897 POLR2KP53803 58 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms