RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 ATG5Q9H1Y0 275 aa4.39□□□□□ -1.71
H3F3A-201ENST00000366813 SMCO4Q9NRQ5 59 aa4.39□□□□□ -1.71
H3F3A-201ENST00000366813 SFT2D2O95562 160 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 MT-ND4LP03901 98 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 PET100P0DJ07 73 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 RD3LP0DJH9 198 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 DTYMKP23919 212 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 F2RP25116 425 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 FXYD4P59646 89 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 RAB5BP61020 215 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 HIST1H1AQ02539 215 aaPredicted RBP4.38□□□□□ -1.71
H3F3A-201ENST00000366813 ARL6IP1Q15041 203 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 MSMO1Q15800 293 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 PSG3Q16557 428 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 FAM74A1Q5RGS3 127 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 TERB2Q8NHR7 220 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 PARD6GQ9BYG4 376 aaPredicted RBP4.38□□□□□ -1.71
H3F3A-201ENST00000366813 PPDPFQ9H3Y8 114 aa4.38□□□□□ -1.71
H3F3A-201ENST00000366813 TRAV8-2A0A0B4J237 113 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 CORTO00230 105 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 GATCO43716 136 aaKnown RBP4.37□□□□□ -1.71
H3F3A-201ENST00000366813 PPYP01298 95 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 RAB5CP51148 216 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 PEA15Q15121 130 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 OR8I2Q8N0Y5 310 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 LINC01561Q8N1V8 128 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 LINC00469Q8N7U9 141 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 C2orf50Q96LR7 162 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 RSG1Q9BU20 258 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 MRPL32Q9BYC8 188 aaKnown RBP4.37□□□□□ -1.71
H3F3A-201ENST00000366813 OR51M1Q9H341 326 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 CACFD1Q9UGQ2 172 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 VAX2Q9UIW0 290 aa4.37□□□□□ -1.71
H3F3A-201ENST00000366813 ZFP92A6NM28 416 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 EIF3GO75821 320 aaKnown RBP eCLIP4.36□□□□□ -1.71
H3F3A-201ENST00000366813 SEC11BP0C7V7 166 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 S100PP25815 95 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 RPL29P47914 159 aaKnown RBP4.36□□□□□ -1.71
H3F3A-201ENST00000366813 SUB1P53999 127 aaKnown RBP eCLIP4.36□□□□□ -1.71
H3F3A-201ENST00000366813 LYZP61626 148 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 POLR2GP62487 172 aaKnown RBP eCLIP4.36□□□□□ -1.71
H3F3A-201ENST00000366813 SUPT4H1P63272 117 aaKnown RBP4.36□□□□□ -1.71
H3F3A-201ENST00000366813 SLAQ13239 276 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 LAGE3Q14657 143 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 IBA57Q5T440 356 aaKnown RBP4.36□□□□□ -1.71
H3F3A-201ENST00000366813 CEND1Q8N111 149 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 ZNF738Q8NE65 137 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 HIST1H2BAQ96A08 127 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 ANXA10Q9UJ72 324 aa4.36□□□□□ -1.71
H3F3A-201ENST00000366813 LOC100131303A0A0U1RQF7 123 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 C1orf196B1AJZ1 125 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 PITX3O75364 302 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 PGLYRP1O75594 196 aaPredicted RBP4.35□□□□□ -1.71
H3F3A-201ENST00000366813 HRH1P35367 487 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 RPL35P42766 123 aaKnown RBP4.35□□□□□ -1.71
H3F3A-201ENST00000366813 PPT1P50897 306 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 TAS2R46P59540 309 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 RHEBQ15382 184 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 C1orf194Q5T5A4 169 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 H2BFWTQ7Z2G1 175 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 CBLN2Q8IUK8 224 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 OR8A1Q8NGG7 326 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 ATP6V0E2Q8NHE4 81 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 SEC22AQ96IW7 307 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 SLC35E1Q96K37 410 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 DNAJC30Q96LL9 226 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 YPEL4Q96NS1 127 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 RTBDNQ9BSG5 229 aaPredicted RBP4.35□□□□□ -1.71
H3F3A-201ENST00000366813 MRPL16Q9NX20 251 aaKnown RBP4.35□□□□□ -1.71
H3F3A-201ENST00000366813 KLF12Q9Y4X4 402 aa4.35□□□□□ -1.71
H3F3A-201ENST00000366813 A0A087WWC5 75 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 TRAV8-3A0A0A6YYJ7 113 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 TRAV8-6A0A0B4J262 113 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 TRGV4A0A0C4DH28 118 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 MEIS3P1A6NDR6 274 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 WRBO00258 174 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 SPINK4O60575 86 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 NDUFS6O75380 124 aaKnown RBP4.34□□□□□ -1.71
H3F3A-201ENST00000366813 S100A9P06702 114 aaKnown RBP4.34□□□□□ -1.71
H3F3A-201ENST00000366813 S100A6P06703 90 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 FABP1P07148 127 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 SFTA3P0C7M3 94 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 SCGB2B2Q4G0G5 96 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 OR10J3Q5JRS4 329 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 SAMD13Q5VXD3 122 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 SLC35G3Q8N808 338 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 C11orf72Q8NBR9 251 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 DPH3Q96FX2 82 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 ACY3Q96HD9 319 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 TXNDC17Q9BRA2 123 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 SLC25A31Q9H0C2 315 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 TREM1Q9NP99 234 aa4.34□□□□□ -1.71
H3F3A-201ENST00000366813 TRAV12-3A0A0B4J271 114 aa4.33□□□□□ -1.72
H3F3A-201ENST00000366813 PCP4L1A6NKN8 68 aa4.33□□□□□ -1.72
H3F3A-201ENST00000366813 LINC00587B1AMM8 73 aa4.33□□□□□ -1.72
H3F3A-201ENST00000366813 INS-IGF2F8WCM5 200 aa4.33□□□□□ -1.72
H3F3A-201ENST00000366813 IGKV1-39P01597 117 aa4.33□□□□□ -1.72
H3F3A-201ENST00000366813 IGKV1D-39P04432 117 aa4.33□□□□□ -1.72
H3F3A-201ENST00000366813 AKR1D1P51857 326 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms