RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 RITA1Q96K30 269 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 TRAV12-2A0A075B6T6 113 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 TRAV25A0A0B4J276 109 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 TNFRSF13BO14836 293 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 EGR2P11161 476 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 HOXB4P17483 251 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 hADV29S1A0JD25 119 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGHV3-11P01762 117 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 Q71RC1 249 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 DTX2Q86UW9 622 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGHV3OR16-10A0A075B7F0 116 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 MUSTN1Q8IVN3 82 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 SPTSSBQ8NFR3 76 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 DAZ1Q9NQZ3 744 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 PCNTO95613 3336 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 CENPVL3A0A0U1RRI6 287 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 PRB2P02812 416 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 Q8NA96 180 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 C20orf173Q96LM9 149 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 MRPL36Q9P0J6 103 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 MED14OSP0DP75 135 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 NDPQ00604 133 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 SMIM2Q9BVW6 85 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 LY6LH3BQJ8 138 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 SS18Q15532 418 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 Q8N9W7 124 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 C17orf77Q96MU5 243 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 LINC00643Q86TS7 51 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGHV7-81A0A0B4J1V7 117 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 J3QLI3 93 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 EBI3Q14213 229 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 RHPN1-AS1Q9BWJ2 59 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 TP53TG3Q9ULZ0 132 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 OTOGLQ3ZCN5 2332 aa4.17□□□□□ -1.74
CDC42BPA-204ENST00000366767 CCDC179H3BU77 68 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 PFN2P35080 140 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 C2orf70A6NJV1 201 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 ODF3BA8MYP8 253 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 F5H768 121 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 H3BUX3 64 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 CXCL5P42830 114 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 BAALCQ8WXS3 180 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 H3BT86 120 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 BUB3O43684 328 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 NDUFA7O95182 113 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 CTRLP40313 264 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 FANCD2OSQ96PS1 177 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 CTSGP08311 255 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 FAM120AOSQ5T036 256 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 MSMBP08118 114 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 C10orf105Q8TEF2 133 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 CFHR4Q92496 578 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 SMIM9A6NGZ8 99 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 FOXE3Q13461 319 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 SIRPDQ9H106 197 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 A4D1N5 150 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 LY6HO94772 140 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 C9orf47Q6ZRZ4 202 aa4.16□□□□□ -1.74
CDC42BPA-204ENST00000366767 RHODO00212 210 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 WFDC11Q8NEX6 87 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 TMEM89A2RUT3 159 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 SDHAF1A6NFY7 115 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 TCL1BO95988 128 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 TMEM219Q86XT9 240 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 LINC01356Q8N9X3 169 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGLC6P0CF74 106 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 ADORA2A-AS1P86434 159 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 FAM110AQ9BQ89 295 aa4.15□□□□□ -1.74
CDC42BPA-204ENST00000366767 LGALS9O00182 355 aa4.15□□□□□ -1.75
CDC42BPA-204ENST00000366767 LINC00694P0DN24 101 aa4.15□□□□□ -1.75
CDC42BPA-204ENST00000366767 GNLYP22749 145 aa4.15□□□□□ -1.75
CDC42BPA-204ENST00000366767 AGPAT4-IT1Q9H0P7 198 aa4.15□□□□□ -1.75
CDC42BPA-204ENST00000366767 IGHV1OR15-1A0A075B7D0 117 aa4.15□□□□□ -1.75
CDC42BPA-204ENST00000366767 RNF152Q8N8N0 203 aa4.15□□□□□ -1.75
CDC42BPA-204ENST00000366767 HTN3P15516 51 aa4.15□□□□□ -1.75
CDC42BPA-204ENST00000366767 IGHV3-53P01767 116 aa4.15□□□□□ -1.75
CDC42BPA-204ENST00000366767 TRGV1A0A0A0MS02 117 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 Q8N1Y9 231 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 CLEC2BQ92478 149 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 PTPRQQ9UMZ3 2332 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 CLPSL1A2RUU4 121 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 DYNAPQ8N1N2 210 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 SLC25A29Q8N8R3 303 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 G3V318 75 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 K7EMT4 169 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 PIFOQ8TCI5 191 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 IGHV7-4-1A0A0J9YVY3 117 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 FRMD6-AS1P0C7T7 363 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 TRAV4A0A0B4J268 109 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 CHKB-CPT1BH3BT56 60 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 LY6DQ14210 128 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 GDF5OSQ5U4N7 250 aa4.14□□□□□ -1.75
CDC42BPA-204ENST00000366767 MP68P56378 58 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 C22orf34Q6ZV56 151 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 TMEM61Q8N0U2 210 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 C5orf56Q8N8D9 126 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 H0YGX0 51 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 TTTY13Q9BZ97 58 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 LINC00322Q6ZN03 302 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 U3KQK5 164 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms