RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 PLAC8L1A1L4L8 177 aa8.67□□□□□ -1.02
MRPL55-209ENST00000366735 A8MWL6 223 aa8.67□□□□□ -1.02
MRPL55-209ENST00000366735 PRB4P10163 310 aaPredicted RBP8.67□□□□□ -1.02
MRPL55-209ENST00000366735 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
MRPL55-209ENST00000366735 ODF3Q96PU9 254 aa8.67□□□□□ -1.02
MRPL55-209ENST00000366735 GFRA4Q9GZZ7 299 aa8.67□□□□□ -1.02
MRPL55-209ENST00000366735 LINC00588Q9Y4M8 146 aa8.67□□□□□ -1.02
MRPL55-209ENST00000366735 A0A1W2PPQ1 181 aa8.66□□□□□ -1.02
MRPL55-209ENST00000366735 SNURFLB1AK76 121 aa8.66□□□□□ -1.02
MRPL55-209ENST00000366735 SH2D1AO60880 128 aa8.66□□□□□ -1.02
MRPL55-209ENST00000366735 CRISP2P16562 243 aa8.66□□□□□ -1.02
MRPL55-209ENST00000366735 AZU1P20160 251 aa8.66□□□□□ -1.02
MRPL55-209ENST00000366735 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
MRPL55-209ENST00000366735 RNASE8Q8TDE3 154 aaKnown RBP8.66□□□□□ -1.02
MRPL55-209ENST00000366735 NOP10Q9NPE3 64 aaKnown RBP8.66□□□□□ -1.02
MRPL55-209ENST00000366735 FABP5P3A8MUU1 101 aa8.65□□□□□ -1.02
MRPL55-209ENST00000366735 SCGB1D1O95968 90 aa8.65□□□□□ -1.02
MRPL55-209ENST00000366735 PRM2P04554 102 aa8.65□□□□□ -1.02
MRPL55-209ENST00000366735 ZNF80P51504 273 aaPredicted RBP8.65□□□□□ -1.02
MRPL55-209ENST00000366735 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.02
MRPL55-209ENST00000366735 RPL19P84098 196 aaKnown RBP8.65□□□□□ -1.02
MRPL55-209ENST00000366735 ZFAND2AQ8N6M9 145 aa8.65□□□□□ -1.02
MRPL55-209ENST00000366735 OR2D3Q8NGH3 330 aa8.65□□□□□ -1.02
MRPL55-209ENST00000366735 Q9H8V8 135 aa8.65□□□□□ -1.02
MRPL55-209ENST00000366735 HSPG2P98160 4391 aa8.65□□□□□ -1.02
MRPL55-209ENST00000366735 RPS20P60866 119 aaKnown RBP8.64□□□□□ -1.03
MRPL55-209ENST00000366735 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
MRPL55-209ENST00000366735 KRTAP4-5Q9BYR2 181 aa8.64□□□□□ -1.03
MRPL55-209ENST00000366735 NAT8BQ9UHF3 227 aa8.64□□□□□ -1.03
MRPL55-209ENST00000366735 TRAV26-1A0A087WT03 109 aa8.63□□□□□ -1.03
MRPL55-209ENST00000366735 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
MRPL55-209ENST00000366735 H3BNG1 76 aa8.63□□□□□ -1.03
MRPL55-209ENST00000366735 RPS10P46783 165 aaKnown RBP8.63□□□□□ -1.03
MRPL55-209ENST00000366735 Q6AWC8 147 aa8.63□□□□□ -1.03
MRPL55-209ENST00000366735 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
MRPL55-209ENST00000366735 UPK3BQ9BT76 320 aa8.63□□□□□ -1.03
MRPL55-209ENST00000366735 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 C1orf196B1AJZ1 125 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 KLLNB2CW77 178 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 LEPP41159 167 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 TCL1AP56279 114 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 COX19Q49B96 90 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 ATP5L2Q7Z4Y8 100 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 Q8N1X5 172 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 NUP35Q8NFH5 326 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 GTSF1Q8WW33 167 aa8.62□□□□□ -1.03
MRPL55-209ENST00000366735 PRR9Q5T870 116 aa8.61□□□□□ -1.03
MRPL55-209ENST00000366735 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
MRPL55-209ENST00000366735 MRPS16Q9Y3D3 137 aaKnown RBP8.61□□□□□ -1.03
MRPL55-209ENST00000366735 TRAV21A0A0B4J279 112 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 A0A0J9YY99 117 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 GAGE12BA1L429 117 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 PHOX2AO14813 284 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 GAGE7O76087 117 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 GPX1P07203 203 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 GAGE12FP0CL80 117 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 GAGE12GP0CL81 117 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 GAGE12IP0CL82 117 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 RAB5BP61020 215 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 WDR73Q6P4I2 378 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 SCRT2Q9NQ03 307 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 C11orf21Q9P2W6 132 aa8.6□□□□□ -1.03
MRPL55-209ENST00000366735 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
MRPL55-209ENST00000366735 A0A1B0GXF2 115 aa8.59□□□□□ -1.03
MRPL55-209ENST00000366735 ORM1P02763 201 aa8.59□□□□□ -1.03
MRPL55-209ENST00000366735 MT-ND6P03923 174 aa8.59□□□□□ -1.03
MRPL55-209ENST00000366735 IGLC6P0CF74 106 aa8.59□□□□□ -1.03
MRPL55-209ENST00000366735 TRGV2A0A075B6R0 118 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 IGKV3D-20A0A0C4DH25 116 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 A0A1B0GUT8 65 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 A0A1B0GW15 77 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 TRGC2P03986 189 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 GZMBP10144 247 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
MRPL55-209ENST00000366735 CTRLP40313 264 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
MRPL55-209ENST00000366735 DGAT2L7PQ6IED9 249 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 PGLYRP4Q96LB8 373 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 FAM30AQ9NZY2 134 aa8.58□□□□□ -1.04
MRPL55-209ENST00000366735 TRAV12-3A0A0B4J271 114 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 C7orf71A4D174 169 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 F2Z2F3 143 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 HLA-DQA1P01909 254 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 HOXA5P20719 270 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 ESRGQ1W209 222 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 GAGE13Q4V321 117 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 DNLZQ5SXM8 178 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 MRPL54Q6P161 138 aaKnown RBP8.57□□□□□ -1.04
MRPL55-209ENST00000366735 TMEM136Q6ZRR5 245 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 CNFNQ9BYD5 112 aa8.57□□□□□ -1.04
MRPL55-209ENST00000366735 TMSB15BA0A087X1C1 80 aa8.56□□□□□ -1.04
MRPL55-209ENST00000366735 SPINK4O60575 86 aa8.56□□□□□ -1.04
MRPL55-209ENST00000366735 ZNF324O75467 553 aaPredicted RBP8.56□□□□□ -1.04
MRPL55-209ENST00000366735 S100A8P05109 93 aa8.56□□□□□ -1.04
MRPL55-209ENST00000366735 HBBP68871 147 aa8.56□□□□□ -1.04
MRPL55-209ENST00000366735 RIGQ13278 110 aa8.56□□□□□ -1.04
MRPL55-209ENST00000366735 TDRG1Q3Y452 100 aa8.56□□□□□ -1.04
MRPL55-209ENST00000366735 FER1L6-AS1Q8NA97 138 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms