RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 COL4A6Q14031 1691 aa-3.19□□□□□ -2.92
RNU4-40P-201ENST00000364351 TMEM210A6NLX4 147 aa-3.19□□□□□ -2.92
RNU4-40P-201ENST00000364351 RPL35P42766 123 aaKnown RBP-3.19□□□□□ -2.92
RNU4-40P-201ENST00000364351 HBBP68871 147 aa-3.19□□□□□ -2.92
RNU4-40P-201ENST00000364351 SSBP1Q04837 148 aaKnown RBP-3.19□□□□□ -2.92
RNU4-40P-201ENST00000364351 MCEEQ96PE7 176 aa-3.19□□□□□ -2.92
RNU4-40P-201ENST00000364351 V9GYV3 84 aa-3.19□□□□□ -2.92
RNU4-40P-201ENST00000364351 RANBP2P49792 3224 aaKnown RBP-3.19□□□□□ -2.92
RNU4-40P-201ENST00000364351 TRGC2P03986 189 aa-3.2□□□□□ -2.92
RNU4-40P-201ENST00000364351 POLR2JP52435 117 aaKnown RBP-3.2□□□□□ -2.92
RNU4-40P-201ENST00000364351 GTF2A1P52655 376 aaPredicted RBP-3.2□□□□□ -2.92
RNU4-40P-201ENST00000364351 H1FX-AS1Q4G0G2 97 aa-3.2□□□□□ -2.92
RNU4-40P-201ENST00000364351 CCDC122Q5T0U0 273 aa-3.2□□□□□ -2.92
RNU4-40P-201ENST00000364351 OR4S1Q8NGB4 309 aa-3.2□□□□□ -2.92
RNU4-40P-201ENST00000364351 ZNF609O15014 1411 aa-3.2□□□□□ -2.92
RNU4-40P-201ENST00000364351 ADAMTS12P58397 1594 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 BPTFQ12830 3046 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 A0A087WUJ7 227 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 BANF1O75531 89 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 TFF1P04155 84 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 IFNA16P05015 189 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 CYP2G1PQ6ZSU1 146 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 MAFIPQ8WZ33 124 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 DIRC1Q969H9 104 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 PBDC1Q9BVG4 233 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 CD109Q6YHK3 1445 aa-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 ZNF142P52746 1687 aaPredicted RBP-3.21□□□□□ -2.92
RNU4-40P-201ENST00000364351 KNDC1Q76NI1 1749 aa-3.22□□□□□ -2.92
RNU4-40P-201ENST00000364351 CAMSAP2Q08AD1 1489 aa-3.22□□□□□ -2.92
RNU4-40P-201ENST00000364351 PTPN23Q9H3S7 1636 aa-3.22□□□□□ -2.92
RNU4-40P-201ENST00000364351 A0A1B0GW64 132 aa-3.22□□□□□ -2.92
RNU4-40P-201ENST00000364351 IFNA14P01570 189 aa-3.22□□□□□ -2.92
RNU4-40P-201ENST00000364351 MT1EP04732 61 aa-3.22□□□□□ -2.92
RNU4-40P-201ENST00000364351 PHF5AQ7RTV0 110 aaKnown RBP-3.22□□□□□ -2.92
RNU4-40P-201ENST00000364351 SMIM7Q9BQ49 75 aa-3.22□□□□□ -2.92
RNU4-40P-201ENST00000364351 TAF9BQ9HBM6 251 aa-3.22□□□□□ -2.92
RNU4-40P-201ENST00000364351 LRP6O75581 1613 aa-3.22□□□□□ -2.93
RNU4-40P-201ENST00000364351 SLIT1O75093 1534 aa-3.23□□□□□ -2.93
RNU4-40P-201ENST00000364351 TRAV1-2A0A0B4J238 106 aa-3.23□□□□□ -2.93
RNU4-40P-201ENST00000364351 SAA1P0DJI8 122 aaPredicted RBP-3.23□□□□□ -2.93
RNU4-40P-201ENST00000364351 PTPRGP23470 1445 aa-3.23□□□□□ -2.93
RNU4-40P-201ENST00000364351 OR10X1Q8NGY0 326 aa-3.23□□□□□ -2.93
RNU4-40P-201ENST00000364351 COX7B2Q8TF08 81 aa-3.23□□□□□ -2.93
RNU4-40P-201ENST00000364351 PAPPAQ13219 1627 aa-3.23□□□□□ -2.93
RNU4-40P-201ENST00000364351 WNK3Q9BYP7 1800 aa-3.23□□□□□ -2.93
RNU4-40P-201ENST00000364351 ERCC6L2Q5T890 1561 aa-3.24□□□□□ -2.93
RNU4-40P-201ENST00000364351 KDM3BQ7LBC6 1761 aa-3.24□□□□□ -2.93
RNU4-40P-201ENST00000364351 IFNA21P01568 189 aa-3.24□□□□□ -2.93
RNU4-40P-201ENST00000364351 S100A3P33764 101 aa-3.24□□□□□ -2.93
RNU4-40P-201ENST00000364351 HIST1H3AP68431 136 aa-3.24□□□□□ -2.93
RNU4-40P-201ENST00000364351 MT1LQ93083 61 aa-3.24□□□□□ -2.93
RNU4-40P-201ENST00000364351 OR2J1Q9GZK6 312 aa-3.24□□□□□ -2.93
RNU4-40P-201ENST00000364351 SCN3BQ9NY72 215 aa-3.24□□□□□ -2.93
RNU4-40P-201ENST00000364351 TAF1AQ15573 450 aaPredicted RBP-3.25□□□□□ -2.93
RNU4-40P-201ENST00000364351 DGCR14Q96DF8 476 aaKnown RBP-3.25□□□□□ -2.93
RNU4-40P-201ENST00000364351 GPX7Q96SL4 187 aaPredicted RBP-3.25□□□□□ -2.93
RNU4-40P-201ENST00000364351 PRELID3BQ9Y3B1 194 aa-3.25□□□□□ -2.93
RNU4-40P-201ENST00000364351 SPTAN1Q13813 2472 aaKnown RBP-3.26□□□□□ -2.93
RNU4-40P-201ENST00000364351 CXorf51AA0A1B0GTR3 108 aa-3.26□□□□□ -2.93
RNU4-40P-201ENST00000364351 TPT1P13693 172 aaKnown RBP-3.26□□□□□ -2.93
RNU4-40P-201ENST00000364351 ADCYAP1P18509 176 aa-3.26□□□□□ -2.93
RNU4-40P-201ENST00000364351 OR2T2Q6IF00 324 aa-3.26□□□□□ -2.93
RNU4-40P-201ENST00000364351 CNPY4Q8N129 248 aa-3.26□□□□□ -2.93
RNU4-40P-201ENST00000364351 FKBP11Q9NYL4 201 aa-3.26□□□□□ -2.93
RNU4-40P-201ENST00000364351 ZMYM4Q5VZL5 1548 aa-3.27□□□□□ -2.93
RNU4-40P-201ENST00000364351 HMGB3O15347 200 aaKnown RBP-3.27□□□□□ -2.93
RNU4-40P-201ENST00000364351 C20orf197Q8N268 126 aa-3.27□□□□□ -2.93
RNU4-40P-201ENST00000364351 OR8J2Q8NGG1 315 aa-3.27□□□□□ -2.93
RNU4-40P-201ENST00000364351 VPS25Q9BRG1 176 aa-3.27□□□□□ -2.93
RNU4-40P-201ENST00000364351 DNAH10Q8IVF4 4471 aa-3.28□□□□□ -2.93
RNU4-40P-201ENST00000364351 GOLGA4Q13439 2230 aaKnown RBP-3.28□□□□□ -2.93
RNU4-40P-201ENST00000364351 MAXP61244 160 aa-3.28□□□□□ -2.93
RNU4-40P-201ENST00000364351 NEK7Q8TDX7 302 aa-3.28□□□□□ -2.93
RNU4-40P-201ENST00000364351 AMELXQ99217 191 aa-3.28□□□□□ -2.93
RNU4-40P-201ENST00000364351 MAP3K5Q99683 1374 aa-3.28□□□□□ -2.93
RNU4-40P-201ENST00000364351 PHIPQ8WWQ0 1821 aa-3.28□□□□□ -2.94
RNU4-40P-201ENST00000364351 DLC1Q96QB1 1528 aa-3.29□□□□□ -2.94
RNU4-40P-201ENST00000364351 COL14A1Q05707 1796 aaKnown RBP-3.29□□□□□ -2.94
RNU4-40P-201ENST00000364351 KPNA4O00629 521 aaPredicted RBP-3.29□□□□□ -2.94
RNU4-40P-201ENST00000364351 IFNA6P05013 189 aa-3.29□□□□□ -2.94
RNU4-40P-201ENST00000364351 IFT172Q9UG01 1749 aa-3.3□□□□□ -2.94
RNU4-40P-201ENST00000364351 ZFHX4Q86UP3 3567 aa-3.3□□□□□ -2.94
RNU4-40P-201ENST00000364351 OR8B8Q15620 311 aa-3.3□□□□□ -2.94
RNU4-40P-201ENST00000364351 PPDPFLQ8WWR9 84 aa-3.3□□□□□ -2.94
RNU4-40P-201ENST00000364351 NPVFQ9HCQ7 196 aa-3.3□□□□□ -2.94
RNU4-40P-201ENST00000364351 UHRF1BP1Q6BDS2 1440 aa-3.3□□□□□ -2.94
RNU4-40P-201ENST00000364351 IFNGP01579 166 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 ERVS71-1P61550 626 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 ALX1Q15699 326 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 DEFB110Q30KQ9 67 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 Q5VV11 94 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 C3orf33Q6P1S2 294 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 OR5H6Q8NGV6 325 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 AP3S1Q92572 193 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 NSD3Q9BZ95 1437 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 WDR97A6NE52 1622 aa-3.31□□□□□ -2.94
RNU4-40P-201ENST00000364351 TCOF1Q13428 1488 aaKnown RBP-3.32□□□□□ -2.94
RNU4-40P-201ENST00000364351 OGNP20774 298 aaKnown RBP-3.32□□□□□ -2.94
RNU4-40P-201ENST00000364351 CFAP126Q5VTH2 177 aa-3.33□□□□□ -2.94
RNU4-40P-201ENST00000364351 CCDC144AA2RUR9 1427 aa-3.34□□□□□ -2.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms