RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 HIGD1BQ9P298 99 aa10.47□□□□□ -0.73
SGMS1-202ENST00000361781 LINC01587Q99440 93 aa10.47□□□□□ -0.73
SGMS1-202ENST00000361781 MSRB2Q9Y3D2 182 aa10.47□□□□□ -0.73
SGMS1-202ENST00000361781 TRAV8-3A0A0A6YYJ7 113 aa10.46□□□□□ -0.73
SGMS1-202ENST00000361781 TRBV6-1A0A0K0K1D8 114 aa10.46□□□□□ -0.73
SGMS1-202ENST00000361781 LGALS1P09382 135 aaKnown RBP10.46□□□□□ -0.73
SGMS1-202ENST00000361781 MRGPRG-AS1Q2M3A8 158 aa10.46□□□□□ -0.73
SGMS1-202ENST00000361781 BAALCQ8WXS3 180 aa10.46□□□□□ -0.73
SGMS1-202ENST00000361781 PRO1854Q9UHT4 67 aa10.46□□□□□ -0.73
SGMS1-202ENST00000361781 DAZ1Q9NQZ3 744 aaKnown RBP10.46□□□□□ -0.73
SGMS1-202ENST00000361781 TSPAN13O95857 204 aa10.46□□□□□ -0.74
SGMS1-202ENST00000361781 C2orf82Q6UX34 121 aa10.46□□□□□ -0.74
SGMS1-202ENST00000361781 GATD1Q8NB37 220 aa10.46□□□□□ -0.74
SGMS1-202ENST00000361781 PPDPFLQ8WWR9 84 aa10.46□□□□□ -0.74
SGMS1-202ENST00000361781 PRO3102Q9H379 93 aa10.46□□□□□ -0.74
SGMS1-202ENST00000361781 CENPVL3A0A0U1RRI6 287 aa10.45□□□□□ -0.74
SGMS1-202ENST00000361781 NTN5Q8WTR8 489 aaPredicted RBP10.45□□□□□ -0.74
SGMS1-202ENST00000361781 CCDC140Q96MF4 163 aa10.45□□□□□ -0.74
SGMS1-202ENST00000361781 IGHV3-53P01767 116 aa10.45□□□□□ -0.74
SGMS1-202ENST00000361781 RNASE1P07998 156 aaKnown RBP10.45□□□□□ -0.74
SGMS1-202ENST00000361781 CIRBPQ14011 172 aaKnown RBP10.45□□□□□ -0.74
SGMS1-202ENST00000361781 TAL2Q16559 108 aa10.45□□□□□ -0.74
SGMS1-202ENST00000361781 TMEM190Q8WZ59 177 aa10.45□□□□□ -0.74
SGMS1-202ENST00000361781 SLC25A20O43772 301 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 UFSP1Q6NVU6 142 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 HHLA3Q9XRX5 114 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 TRAV8-4A0A0B4J246 113 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 A0A0J9YXV3 536 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 A0A1W2PRX2 142 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 A4D1N5 150 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 M0R2P5 195 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 AKAP13Q12802 2813 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 TRAV26-1A0A087WT03 109 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 E9PLD3 99 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 K7ENP7 123 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
SGMS1-202ENST00000361781 SPANXB1Q9NS25 103 aaPredicted RBP10.44□□□□□ -0.74
SGMS1-202ENST00000361781 TMEM262E9PQX1 116 aa10.43□□□□□ -0.74
SGMS1-202ENST00000361781 U3KQK5 164 aa10.43□□□□□ -0.74
SGMS1-202ENST00000361781 FOXI1Q12951 378 aa10.43□□□□□ -0.74
SGMS1-202ENST00000361781 C19orf54Q5BKX5 351 aa10.43□□□□□ -0.74
SGMS1-202ENST00000361781 PRR9Q5T870 116 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 TRPT1Q86TN4 253 aaKnown RBP10.42□□□□□ -0.74
SGMS1-202ENST00000361781 RASL10AQ92737 203 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 TRAV13-1A0A0B4J241 112 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 LY6LH3BQJ8 138 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 UCNP55089 124 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 SUMO4Q6EEV6 95 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 OR13C6PQ8NH95 151 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 LRBAP50851 2863 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 RBAKDNA6NC62 111 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 MRPS12O15235 138 aaKnown RBP10.42□□□□□ -0.74
SGMS1-202ENST00000361781 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
SGMS1-202ENST00000361781 FAM223BA6NKX1 122 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 B5MCH6 92 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 FAM223AQ8IWN6 122 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 UBE2E2Q96LR5 201 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 PRRC2AP48634 2157 aaKnown RBP10.41□□□□□ -0.74
SGMS1-202ENST00000361781 DAND5Q8N907 189 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 C1QTNF4Q9BXJ3 329 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 MT-ATP8P03928 68 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 DEFB131AP59861 70 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 CDSNQ15517 529 aa10.41□□□□□ -0.74
SGMS1-202ENST00000361781 PIP4P2Q8N4L2 257 aa10.4□□□□□ -0.74
SGMS1-202ENST00000361781 IGHV1-69DA0A0B4J2H0 117 aa10.4□□□□□ -0.74
SGMS1-202ENST00000361781 IGHV1-69P01742 117 aa10.4□□□□□ -0.74
SGMS1-202ENST00000361781 IGHV4-38-2P0DP08 117 aa10.4□□□□□ -0.74
SGMS1-202ENST00000361781 GNLYP22749 145 aa10.4□□□□□ -0.74
SGMS1-202ENST00000361781 SS18L2Q9UHA2 77 aa10.4□□□□□ -0.74
SGMS1-202ENST00000361781 CEMP1Q6PRD7 247 aaPredicted RBP10.4□□□□□ -0.75
SGMS1-202ENST00000361781 AJUBAQ96IF1 538 aa10.4□□□□□ -0.75
SGMS1-202ENST00000361781 NDUFA4O00483 81 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 C9orf47Q6ZRZ4 202 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 C10orf126Q8N4M7 172 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 ANKRD29Q8N6D5 301 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 MDFICQ9P1T7 246 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 MUSTN1Q8IVN3 82 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 C3orf56Q8N813 242 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 TOMM6Q96B49 74 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 ZFAND3Q9H8U3 227 aa10.39□□□□□ -0.75
SGMS1-202ENST00000361781 F8W735 103 aaPredicted RBP10.38□□□□□ -0.75
SGMS1-202ENST00000361781 TNFRSF13BO14836 293 aaPredicted RBP10.38□□□□□ -0.75
SGMS1-202ENST00000361781 UBE2L6O14933 153 aa10.38□□□□□ -0.75
SGMS1-202ENST00000361781 C16orf54Q6UWD8 224 aa10.38□□□□□ -0.75
SGMS1-202ENST00000361781 NRACQ8N912 160 aa10.38□□□□□ -0.75
SGMS1-202ENST00000361781 USMG5Q96IX5 58 aa10.38□□□□□ -0.75
SGMS1-202ENST00000361781 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
SGMS1-202ENST00000361781 NDUFA12Q9UI09 145 aa10.38□□□□□ -0.75
SGMS1-202ENST00000361781 TCL1BO95988 128 aa10.38□□□□□ -0.75
SGMS1-202ENST00000361781 CFC1BP0CG36 223 aa10.38□□□□□ -0.75
SGMS1-202ENST00000361781 CFC1P0CG37 223 aa10.38□□□□□ -0.75
SGMS1-202ENST00000361781 LY6G5BQ8NDX9 201 aa10.38□□□□□ -0.75
SGMS1-202ENST00000361781 ACANP16112 2415 aa10.37□□□□□ -0.75
SGMS1-202ENST00000361781 IGHV7-4-1A0A0J9YVY3 117 aa10.37□□□□□ -0.75
SGMS1-202ENST00000361781 ADORA2A-AS1P86434 159 aa10.37□□□□□ -0.75
SGMS1-202ENST00000361781 C5orf56Q8N8D9 126 aa10.37□□□□□ -0.75
SGMS1-202ENST00000361781 TEN1Q86WV5 123 aa10.37□□□□□ -0.75
SGMS1-202ENST00000361781 C11orf68Q9H3H3 251 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms