RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 IGLV1-47P01700 117 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 PPDPFQ9H3Y8 114 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 LINC00574Q9H8X3 128 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 TP53TG1Q9Y2A0 90 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 TRAV12-3A0A0B4J271 114 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 IGLV2-18A0A075B6J9 118 aa9.72□□□□□ -0.85
VAMP1-201ENST00000361716 UBE2D1P51668 147 aa9.72□□□□□ -0.85
VAMP1-201ENST00000361716 UBE2D3P61077 147 aa9.72□□□□□ -0.85
VAMP1-201ENST00000361716 UBE2D2P62837 147 aa9.72□□□□□ -0.85
VAMP1-201ENST00000361716 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
VAMP1-201ENST00000361716 MRPS12O15235 138 aaKnown RBP9.72□□□□□ -0.85
VAMP1-201ENST00000361716 IGF1P05019 195 aa9.72□□□□□ -0.85
VAMP1-201ENST00000361716 FAM110AQ9BQ89 295 aa9.72□□□□□ -0.85
VAMP1-201ENST00000361716 A0A0J9YY99 117 aa9.71□□□□□ -0.85
VAMP1-201ENST00000361716 B9A039 149 aa9.71□□□□□ -0.85
VAMP1-201ENST00000361716 CD7P09564 240 aa9.71□□□□□ -0.85
VAMP1-201ENST00000361716 LY6DQ14210 128 aa9.71□□□□□ -0.85
VAMP1-201ENST00000361716 IGFL2Q6UWQ7 119 aa9.71□□□□□ -0.85
VAMP1-201ENST00000361716 YAE1D1Q9NRH1 226 aa9.71□□□□□ -0.85
VAMP1-201ENST00000361716 SMAD5-AS1Q9Y6J3 95 aa9.71□□□□□ -0.85
VAMP1-201ENST00000361716 ZNF462Q96JM2 2506 aa9.71□□□□□ -0.85
VAMP1-201ENST00000361716 NEXN-AS1Q8NBZ9 246 aa9.71□□□□□ -0.86
VAMP1-201ENST00000361716 OPRPNQ99935 248 aaPredicted RBP9.71□□□□□ -0.86
VAMP1-201ENST00000361716 H3BMM0 161 aa9.7□□□□□ -0.86
VAMP1-201ENST00000361716 ELANEP08246 267 aa9.7□□□□□ -0.86
VAMP1-201ENST00000361716 LY6EQ16553 131 aa9.7□□□□□ -0.86
VAMP1-201ENST00000361716 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
VAMP1-201ENST00000361716 FANCD2OSQ96PS1 177 aa9.7□□□□□ -0.86
VAMP1-201ENST00000361716 A0A087WWL8 130 aa9.7□□□□□ -0.86
VAMP1-201ENST00000361716 M0QXV9 152 aa9.7□□□□□ -0.86
VAMP1-201ENST00000361716 CCDC168Q8NDH2 2452 aa9.7□□□□□ -0.86
VAMP1-201ENST00000361716 TSPEAR-AS2P59090 65 aa9.69□□□□□ -0.86
VAMP1-201ENST00000361716 F6UB75 175 aa9.69□□□□□ -0.86
VAMP1-201ENST00000361716 BRI3O95415 125 aa9.69□□□□□ -0.86
VAMP1-201ENST00000361716 RNASE4P34096 147 aaKnown RBP9.69□□□□□ -0.86
VAMP1-201ENST00000361716 MUSTN1Q8IVN3 82 aa9.69□□□□□ -0.86
VAMP1-201ENST00000361716 RS1O15537 224 aa9.69□□□□□ -0.86
VAMP1-201ENST00000361716 CTSGP08311 255 aa9.69□□□□□ -0.86
VAMP1-201ENST00000361716 LINC01620Q4KN68 170 aa9.69□□□□□ -0.86
VAMP1-201ENST00000361716 TRAV8-3A0A0A6YYJ7 113 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 J3QQQ9 107 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 ATXN8Q156A1 80 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 VMO1Q7Z5L0 202 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 USP24Q9UPU5 2620 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 A0A0U1RRA0 63 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 ASIPP42127 132 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 OR10J6PQ8NGY7 276 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 TOMM6Q96B49 74 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 METTL26Q96S19 204 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 TRAV12-1A0A0B4J245 112 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.68□□□□□ -0.86
VAMP1-201ENST00000361716 CSMD2Q7Z408 3487 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 IGHG4P01861 327 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 CRYGBP07316 175 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 CLEC2BQ92478 149 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 FAM236AA0A1B0GUQ0 79 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 FAM236BA0A1B0GV22 79 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 GNRH2O43555 120 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 IGHV3-30P01768 117 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 IGHV3-30-5P0DP03 117 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 ATP5J2P56134 94 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 C9orf153Q5TBE3 101 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 JPT2Q9H910 190 aa9.67□□□□□ -0.86
VAMP1-201ENST00000361716 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
VAMP1-201ENST00000361716 ATP6V0E1O15342 81 aa9.66□□□□□ -0.86
VAMP1-201ENST00000361716 Q6ZSV7 163 aa9.66□□□□□ -0.86
VAMP1-201ENST00000361716 ZNF575Q86XF7 245 aa9.66□□□□□ -0.86
VAMP1-201ENST00000361716 SLC50A1Q9BRV3 221 aa9.66□□□□□ -0.86
VAMP1-201ENST00000361716 RBAKDNA6NC62 111 aa9.66□□□□□ -0.86
VAMP1-201ENST00000361716 TNFRSF13BO14836 293 aaPredicted RBP9.66□□□□□ -0.86
VAMP1-201ENST00000361716 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
VAMP1-201ENST00000361716 PMVKQ15126 192 aa9.66□□□□□ -0.86
VAMP1-201ENST00000361716 SPXQ9BT56 116 aa9.66□□□□□ -0.86
VAMP1-201ENST00000361716 CELSR1Q9NYQ6 3014 aa9.66□□□□□ -0.86
VAMP1-201ENST00000361716 IGHV7-4-1A0A0J9YVY3 117 aa9.65□□□□□ -0.86
VAMP1-201ENST00000361716 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.86
VAMP1-201ENST00000361716 KAAG1Q9UBP8 84 aa9.65□□□□□ -0.86
VAMP1-201ENST00000361716 ABCA12Q86UK0 2595 aa9.65□□□□□ -0.86
VAMP1-201ENST00000361716 KLK5Q9Y337 293 aaPredicted RBP9.65□□□□□ -0.86
VAMP1-201ENST00000361716 IGLV11-55A0A075B6I3 123 aa9.65□□□□□ -0.87
VAMP1-201ENST00000361716 IGHV3-33P01772 117 aa9.65□□□□□ -0.87
VAMP1-201ENST00000361716 ODF3Q96PU9 254 aa9.65□□□□□ -0.87
VAMP1-201ENST00000361716 NOTCH2Q04721 2471 aa9.64□□□□□ -0.87
VAMP1-201ENST00000361716 TRGV11A0A075B6L2 103 aa9.64□□□□□ -0.87
VAMP1-201ENST00000361716 RNASE13Q5GAN3 156 aaKnown RBP9.64□□□□□ -0.87
VAMP1-201ENST00000361716 BRD3OSQ6XYD6 125 aa9.64□□□□□ -0.87
VAMP1-201ENST00000361716 EEF1AKMT3Q96AZ1 226 aa9.64□□□□□ -0.87
VAMP1-201ENST00000361716 ZNF580Q9UK33 172 aa9.64□□□□□ -0.87
VAMP1-201ENST00000361716 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
VAMP1-201ENST00000361716 OOSP1A8MZH6 123 aa9.64□□□□□ -0.87
VAMP1-201ENST00000361716 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
VAMP1-201ENST00000361716 PF4V1P10720 104 aa9.63□□□□□ -0.87
VAMP1-201ENST00000361716 PRR9Q5T870 116 aa9.63□□□□□ -0.87
VAMP1-201ENST00000361716 CNFNQ9BYD5 112 aa9.63□□□□□ -0.87
VAMP1-201ENST00000361716 COX6CP09669 75 aa9.63□□□□□ -0.87
VAMP1-201ENST00000361716 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
VAMP1-201ENST00000361716 ZNF22P17026 224 aaPredicted RBP9.63□□□□□ -0.87
VAMP1-201ENST00000361716 SLC25A29Q8N8R3 303 aa9.63□□□□□ -0.87
VAMP1-201ENST00000361716 CHD6Q8TD26 2715 aa9.63□□□□□ -0.87
VAMP1-201ENST00000361716 DUX5Q96PT3 197 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms