RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 A0A1B0GXF2 115 aa10.37□□□□□ -0.75
CCDC144A-203ENST00000360495 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
CCDC144A-203ENST00000360495 RNF152Q8N8N0 203 aa10.37□□□□□ -0.75
CCDC144A-203ENST00000360495 RNF223E7ERA6 249 aa10.37□□□□□ -0.75
CCDC144A-203ENST00000360495 NDUFC2-KCTD14E9PQ53 114 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 MIAQ16674 131 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 IGLV11-55A0A075B6I3 123 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 CTSGP08311 255 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 CGB7P0DN87 165 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 CTSZQ9UBR2 303 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 SBF1O95248 1867 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 TEX22C9J3V5 150 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 TM2D2Q9BX73 214 aa10.36□□□□□ -0.75
CCDC144A-203ENST00000360495 FAM110AQ9BQ89 295 aa10.35□□□□□ -0.75
CCDC144A-203ENST00000360495 MAPK1IP1LQ8NDC0 245 aa10.35□□□□□ -0.75
CCDC144A-203ENST00000360495 PDE6GP18545 87 aa10.35□□□□□ -0.75
CCDC144A-203ENST00000360495 RITA1Q96K30 269 aa10.35□□□□□ -0.75
CCDC144A-203ENST00000360495 TRBV6-1A0A0K0K1D8 114 aa10.35□□□□□ -0.75
CCDC144A-203ENST00000360495 C11orf1Q9H5F2 150 aa10.35□□□□□ -0.75
CCDC144A-203ENST00000360495 CACNA1HO95180 2353 aa10.34□□□□□ -0.75
CCDC144A-203ENST00000360495 C9orf47Q6ZRZ4 202 aa10.34□□□□□ -0.75
CCDC144A-203ENST00000360495 MED14OSP0DP75 135 aa10.34□□□□□ -0.75
CCDC144A-203ENST00000360495 HOXB4P17483 251 aaPredicted RBP10.34□□□□□ -0.75
CCDC144A-203ENST00000360495 DIRC1Q969H9 104 aa10.34□□□□□ -0.75
CCDC144A-203ENST00000360495 GDF5OSQ5U4N7 250 aa10.34□□□□□ -0.75
CCDC144A-203ENST00000360495 GYPEP15421 78 aa10.33□□□□□ -0.76
CCDC144A-203ENST00000360495 APRG1Q8IVJ8 170 aa10.33□□□□□ -0.76
CCDC144A-203ENST00000360495 ABCA4P78363 2273 aa10.33□□□□□ -0.76
CCDC144A-203ENST00000360495 A0A0J9YXY3 114 aa10.33□□□□□ -0.76
CCDC144A-203ENST00000360495 NDUFA7O95182 113 aa10.33□□□□□ -0.76
CCDC144A-203ENST00000360495 DYSFO75923 2080 aa10.33□□□□□ -0.76
CCDC144A-203ENST00000360495 C20orf203Q8NBC4 194 aa10.33□□□□□ -0.76
CCDC144A-203ENST00000360495 PRSS33Q8NF86 280 aa10.33□□□□□ -0.76
CCDC144A-203ENST00000360495 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 PRR30Q53SZ7 412 aaPredicted RBP10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 Q6ZSR3 168 aa10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 NPBQ8NG41 125 aa10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 DENND4AQ7Z401 1863 aa10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 NACAE9PAV3 2078 aa10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 THADAQ6YHU6 1953 aa10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 CACNA1BQ00975 2339 aa10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 C10orf105Q8TEF2 133 aa10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 TRBV7-3A0A075B6L6 115 aa10.32□□□□□ -0.76
CCDC144A-203ENST00000360495 LHBP01229 141 aa10.31□□□□□ -0.76
CCDC144A-203ENST00000360495 HIST2H2BDQ6DRA6 164 aa10.31□□□□□ -0.76
CCDC144A-203ENST00000360495 IGLV2-8P01709 118 aa10.31□□□□□ -0.76
CCDC144A-203ENST00000360495 IGLV2-14P01704 120 aa10.31□□□□□ -0.76
CCDC144A-203ENST00000360495 SPRNQ5BIV9 151 aa10.31□□□□□ -0.76
CCDC144A-203ENST00000360495 MRPL36Q9P0J6 103 aaKnown RBP10.31□□□□□ -0.76
CCDC144A-203ENST00000360495 CLUHP3Q96NS8 147 aa10.31□□□□□ -0.76
CCDC144A-203ENST00000360495 IGLV2-23P01705 113 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 C16orf74Q96GX8 76 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 BPY2O14599 106 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 AJUBAQ96IF1 538 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 CCDC179H3BU77 68 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 KRTAP27-1Q3LI81 207 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 SIP14410 1827 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 CENPVL3A0A0U1RRI6 287 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 CXCL5P42830 114 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 TIRAPP58753 221 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 ENHOQ6UWT2 76 aa10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 TCF20Q9UGU0 1960 aaKnown RBP10.3□□□□□ -0.76
CCDC144A-203ENST00000360495 ATP5EP2Q5VTU8 51 aa10.29□□□□□ -0.76
CCDC144A-203ENST00000360495 LINC00322Q6ZN03 302 aaPredicted RBP10.29□□□□□ -0.76
CCDC144A-203ENST00000360495 NDUFA1O15239 70 aa10.29□□□□□ -0.76
CCDC144A-203ENST00000360495 WFDC11Q8NEX6 87 aa10.29□□□□□ -0.76
CCDC144A-203ENST00000360495 PLXNA3P51805 1871 aa10.29□□□□□ -0.76
CCDC144A-203ENST00000360495 DEFB136Q30KP8 78 aa10.29□□□□□ -0.76
CCDC144A-203ENST00000360495 TP53TG3Q9ULZ0 132 aa10.29□□□□□ -0.76
CCDC144A-203ENST00000360495 YPEL4Q96NS1 127 aa10.28□□□□□ -0.76
CCDC144A-203ENST00000360495 CEMP1Q6PRD7 247 aaPredicted RBP10.28□□□□□ -0.76
CCDC144A-203ENST00000360495 MDFICQ9P1T7 246 aa10.28□□□□□ -0.76
CCDC144A-203ENST00000360495 PLA2G5P39877 138 aa10.28□□□□□ -0.76
CCDC144A-203ENST00000360495 SEM1Q6ZVN7 128 aa10.28□□□□□ -0.76
CCDC144A-203ENST00000360495 COL6A6A6NMZ7 2263 aa10.28□□□□□ -0.76
CCDC144A-203ENST00000360495 MRPS12O15235 138 aaKnown RBP10.27□□□□□ -0.76
CCDC144A-203ENST00000360495 IGHV3-30P01768 117 aa10.27□□□□□ -0.76
CCDC144A-203ENST00000360495 IGHV3-33P01772 117 aa10.27□□□□□ -0.76
CCDC144A-203ENST00000360495 IGHV3-30-5P0DP03 117 aa10.27□□□□□ -0.76
CCDC144A-203ENST00000360495 FAM215AQ9Y5M1 114 aa10.27□□□□□ -0.76
CCDC144A-203ENST00000360495 J3QLI3 93 aa10.27□□□□□ -0.77
CCDC144A-203ENST00000360495 MLST8Q9BVC4 326 aa10.27□□□□□ -0.77
CCDC144A-203ENST00000360495 ACACAQ13085 2346 aa10.27□□□□□ -0.77
CCDC144A-203ENST00000360495 MALRD1Q5VYJ5 2156 aa10.27□□□□□ -0.77
CCDC144A-203ENST00000360495 TRIAP1O43715 76 aa10.27□□□□□ -0.77
CCDC144A-203ENST00000360495 MAPKAPK5-AS1Q8N8E1 139 aa10.27□□□□□ -0.77
CCDC144A-203ENST00000360495 LTBP1Q14766 1721 aa10.27□□□□□ -0.77
CCDC144A-203ENST00000360495 E7EUB6 86 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 DEFB1P60022 68 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 SPAG11BQ08648 103 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 PLXNA4Q9HCM2 1894 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 SEC61GP60059 68 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 P0DMU3 169 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 FAM231AP0DMU4 169 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 FAM231CP0DMU5 169 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 COX7BP24311 80 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 SLURP1P55000 103 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 SERP2Q8N6R1 65 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms