RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 PTPRSQ13332 1948 aa3.2□□□□□ -1.9
SYNE2-204ENST00000358025 TTC28Q96AY4 2481 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 FBXL19-AS1Q494R0 122 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 IGHV3-35A0A0C4DH35 117 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 CTSGP08311 255 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 NRACQ8N912 160 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 RAI1Q7Z5J4 1906 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-204ENST00000358025 CELA3AP09093 270 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 ICOSQ9Y6W8 199 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 IGHV3OR16-8A0A075B7F1 116 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 A0A0J9YY99 117 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 J3QLI3 93 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 TRAV25A0A0B4J276 109 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 MUC4Q99102 2169 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 LINC00526Q96FQ7 95 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 AGPAT4-IT1Q9H0P7 198 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 EBI3Q14213 229 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 MIAQ16674 131 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 ECSCRQ19T08 205 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 PINLYPA6NC86 204 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 LINC00173Q6ZV60 143 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 BAALCQ8WXS3 180 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 NSUN5P1Q3KNT7 163 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 C14orf178Q8N769 122 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-204ENST00000358025 TMEM243Q9BU79 118 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 U3KQE9 123 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 V9GYY9 64 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 IGHV3OR16-13A0A075B7E8 117 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 IGHV3-74A0A0B4J1X5 117 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 C1orf159Q96HA4 380 aa3.19□□□□□ -1.9
SYNE2-204ENST00000358025 TRAV13-1A0A0B4J241 112 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 TGFAP01135 160 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 EFNA4P52798 201 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 GPHB5Q86YW7 130 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 C8orf49Q96NF6 230 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 TRBV7-3A0A075B6L6 115 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 TP53TG1Q9Y2A0 90 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 NDUFA1O15239 70 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 WISP1O95388 367 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 KLK9Q2XQG4 91 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 PRIMA1Q86XR5 153 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 METRNQ9UJH8 293 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 KLK9Q9UKQ9 250 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 SONP18583 2426 aaKnown RBP3.18□□□□□ -1.9
SYNE2-204ENST00000358025 COX7CP15954 63 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 MCRIP2Q9BUT9 160 aaKnown RBP3.18□□□□□ -1.9
SYNE2-204ENST00000358025 ZNF672Q499Z4 452 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-204ENST00000358025 AJUBAQ96IF1 538 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 TNRC18O15417 2968 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-204ENST00000358025 A0A1B0GW54 56 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 ZFP2Q6ZN57 461 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 ATP1A1-AS1Q5TC04 95 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 K7ERJ3 54 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 IGHV3-30P01768 117 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 IGHV3-30-5P0DP03 117 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 HTN3P15516 51 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 LINC00322Q6ZN03 302 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-204ENST00000358025 IGHV3-49A0A0A0MS15 119 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 IGIPA6NJ69 53 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 NTN5Q8WTR8 489 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-204ENST00000358025 ORMDL1Q9P0S3 153 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 RNF185Q96GF1 192 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 DSCR8Q96T75 97 aa3.18□□□□□ -1.9
SYNE2-204ENST00000358025 LY6LH3BQJ8 138 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 TRBV10-3A0A0K0K1G6 114 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 MRGPRG-AS1Q2M3A8 158 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 USP9YO00507 2555 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-204ENST00000358025 IGHV3-66A0A0C4DH42 116 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 CCL21O00585 134 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 TRAV26-2A0A0B4J265 109 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 MALP21145 153 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 LINC00158P58513 81 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 TEX22C9J3V5 150 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 ZNF580Q9UK33 172 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 IGKV3D-20A0A0C4DH25 116 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 VWC2LB2RUY7 222 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 COX7A2LO14548 114 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 FAM27E3Q08E93 113 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 CFHR4Q92496 578 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 TLN1Q9Y490 2541 aaKnown RBP3.17□□□□□ -1.9
SYNE2-204ENST00000358025 TFF1P04155 84 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 PHLDA1Q8WV24 401 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-204ENST00000358025 NAA38Q9BRA0 125 aaKnown RBP3.17□□□□□ -1.9
SYNE2-204ENST00000358025 CDIP1Q9H305 208 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-204ENST00000358025 TMEM223A0PJW6 202 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 TRAV12-2A0A075B6T6 113 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 TRAV41A0A0B4J266 112 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 LYRM9A8MSI8 78 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 IGHV1OR15-1A0A075B7D0 117 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 NRGNQ92686 78 aa3.17□□□□□ -1.9
SYNE2-204ENST00000358025 USP9XQ93008 2570 aaPredicted RBP3.16□□□□□ -1.9
SYNE2-204ENST00000358025 PSMG3-AS1Q96PY0 264 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 TRAV8-3A0A0A6YYJ7 113 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 MT-ATP8P03928 68 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 RBMY1FQ15415 496 aaKnown RBP3.16□□□□□ -1.9
SYNE2-204ENST00000358025 SS18Q15532 418 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 IBA57-AS1B1ANH7 110 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 NXPH4O95158 308 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 ELANEP08246 267 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms