RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 USF3Q68DE3 2245 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 WI2-2373I1.2A0A1W2PRP0 233 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 NDUFA7O95182 113 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 IGLV2-23P01705 113 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 UBE2AP49459 152 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 ARTNQ5T4W7 220 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 MIR7-3HGQ8N6C7 128 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 C2orf70A6NJV1 201 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 MSRB1Q9NZV6 116 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 CENPVL3A0A0U1RRI6 287 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 P0DMU3 169 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 FAM231AP0DMU4 169 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 FAM231CP0DMU5 169 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 IGLV11-55A0A075B6I3 123 aa9.92□□□□□ -0.82
SMC4-202ENST00000357388 F8W735 103 aaPredicted RBP9.92□□□□□ -0.82
SMC4-202ENST00000357388 MYCNOSP40205 109 aa9.92□□□□□ -0.82
SMC4-202ENST00000357388 RSPO1Q2MKA7 263 aaPredicted RBP9.92□□□□□ -0.82
SMC4-202ENST00000357388 PATE2Q6UY27 113 aa9.92□□□□□ -0.82
SMC4-202ENST00000357388 FAM167A-AS1Q96KT0 104 aa9.92□□□□□ -0.82
SMC4-202ENST00000357388 TTTY13Q9BZ97 58 aa9.92□□□□□ -0.82
SMC4-202ENST00000357388 GREB1LQ9C091 1923 aaPredicted RBP9.92□□□□□ -0.82
SMC4-202ENST00000357388 ROS1P08922 2347 aa9.92□□□□□ -0.82
SMC4-202ENST00000357388 RPL39P62891 51 aaKnown RBP9.92□□□□□ -0.82
SMC4-202ENST00000357388 DAND5Q8N907 189 aa9.92□□□□□ -0.82
SMC4-202ENST00000357388 DIAPH2-AS1Q14236 149 aa9.92□□□□□ -0.82
SMC4-202ENST00000357388 C20orf203Q8NBC4 194 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 BRWD3Q6RI45 1802 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 LY6G6EA0A0G2JKS1 128 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 USP17L23D6RBM5 183 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 K7EIM0 57 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 NFE4Q86UQ8 179 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 U3KQA8 63 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 SERP2Q8N6R1 65 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 PI4KAP42356 2102 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 PROK2Q9HC23 129 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 PLA2G2EQ9NZK7 142 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 DOCK7Q96N67 2140 aa9.91□□□□□ -0.82
SMC4-202ENST00000357388 Q6ZSR3 168 aa9.9□□□□□ -0.82
SMC4-202ENST00000357388 DOCK9Q9BZ29 2069 aa9.9□□□□□ -0.82
SMC4-202ENST00000357388 A0A0U1RQV1 116 aa9.9□□□□□ -0.82
SMC4-202ENST00000357388 C19orf71A6NCJ1 209 aa9.9□□□□□ -0.82
SMC4-202ENST00000357388 H0Y9J4 135 aa9.9□□□□□ -0.82
SMC4-202ENST00000357388 K7EMT4 169 aa9.9□□□□□ -0.83
SMC4-202ENST00000357388 SPAG11BQ08648 103 aa9.9□□□□□ -0.83
SMC4-202ENST00000357388 C1orf195Q5TG92 126 aa9.9□□□□□ -0.83
SMC4-202ENST00000357388 SMAD5-AS1Q9Y6J3 95 aa9.9□□□□□ -0.83
SMC4-202ENST00000357388 IGKV1-17P01599 117 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 FANCD2OSQ96PS1 177 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 IGHV4-61A0A0C4DH41 118 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 IGKV4-1P06312 121 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 TRPM7Q96QT4 1865 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 A0A0J9YXY3 114 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 IGHV3-30P01768 117 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 IGHV3-33P01772 117 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 IGHV3-30-5P0DP03 117 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 SLURP1P55000 103 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 WNK2Q9Y3S1 2297 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 DEFB136Q30KP8 78 aa9.89□□□□□ -0.83
SMC4-202ENST00000357388 CREBBPQ92793 2442 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 INSL3P51460 131 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 IGF2-ASQ6U949 168 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 CASC2Q6XLA1 102 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 SDIM1Q6ZPB5 146 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 NOTCH3Q9UM47 2321 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 TRBV30A0A0K0K1B3 111 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 MRPS36P82909 103 aaKnown RBP9.88□□□□□ -0.83
SMC4-202ENST00000357388 TMEM89A2RUT3 159 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 CTSGP08311 255 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 C14orf177Q52M58 125 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 APRG1Q8IVJ8 170 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 PKDREJQ9NTG1 2253 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 SCN5AQ14524 2016 aa9.88□□□□□ -0.83
SMC4-202ENST00000357388 DOCK11Q5JSL3 2073 aa9.87□□□□□ -0.83
SMC4-202ENST00000357388 IGKV2D-26A0A0A0MRZ7 120 aa9.87□□□□□ -0.83
SMC4-202ENST00000357388 IGHV4-30-2A0A087WSY4 118 aa9.87□□□□□ -0.83
SMC4-202ENST00000357388 ZNF503-AS2A6NEH8 195 aa9.87□□□□□ -0.83
SMC4-202ENST00000357388 B9D2Q9BPU9 175 aa9.87□□□□□ -0.83
SMC4-202ENST00000357388 UFSP1Q6NVU6 142 aa9.87□□□□□ -0.83
SMC4-202ENST00000357388 TP53BP1Q12888 1972 aaPredicted RBP9.87□□□□□ -0.83
SMC4-202ENST00000357388 TEX49A0A1B0GTD5 131 aa9.87□□□□□ -0.83
SMC4-202ENST00000357388 GREB1Q4ZG55 1949 aa9.87□□□□□ -0.83
SMC4-202ENST00000357388 FER1L5A0AVI2 2057 aa9.87□□□□□ -0.83
SMC4-202ENST00000357388 RBX1P62877 108 aa9.86□□□□□ -0.83
SMC4-202ENST00000357388 DAZAP2Q15038 168 aaPredicted RBP9.86□□□□□ -0.83
SMC4-202ENST00000357388 IGLV10-54A0A075B6I4 117 aa9.86□□□□□ -0.83
SMC4-202ENST00000357388 SEM1Q6ZVN7 128 aa9.86□□□□□ -0.83
SMC4-202ENST00000357388 KRTAP27-1Q3LI81 207 aa9.86□□□□□ -0.83
SMC4-202ENST00000357388 AJUBAQ96IF1 538 aa9.86□□□□□ -0.83
SMC4-202ENST00000357388 IGHV7-81A0A0B4J1V7 117 aa9.85□□□□□ -0.83
SMC4-202ENST00000357388 COX7CP15954 63 aa9.85□□□□□ -0.83
SMC4-202ENST00000357388 C11orf53Q8IXP5 236 aa9.85□□□□□ -0.83
SMC4-202ENST00000357388 CACNA1HO95180 2353 aa9.85□□□□□ -0.83
SMC4-202ENST00000357388 CTSZQ9UBR2 303 aa9.85□□□□□ -0.83
SMC4-202ENST00000357388 ENHOQ6UWT2 76 aa9.85□□□□□ -0.83
SMC4-202ENST00000357388 SPRY4Q9C004 299 aa9.85□□□□□ -0.83
SMC4-202ENST00000357388 IGHV4-38-2P0DP08 117 aa9.84□□□□□ -0.83
SMC4-202ENST00000357388 KIAA2026Q5HYC2 2103 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms