RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SUMO4Q6EEV6 95 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 RASL10AQ92737 203 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 LENEPQ9Y5L5 61 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 A0A1W2PRX2 142 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 C11orf86A6NJI1 115 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 EBI3Q14213 229 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 POLQO75417 2590 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 NOTCH2Q04721 2471 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 CLPSL1A2RUU4 121 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 B4DSR2 109 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 J3QQQ9 107 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 LGALS1P09382 135 aaKnown RBP5.19□□□□□ -1.58
RTN4-203ENST00000357376 DEFB131AP59861 70 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 SRSF2Q01130 221 aaKnown RBP5.19□□□□□ -1.58
RTN4-203ENST00000357376 MEIG1Q5JSS6 88 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 NRACQ8N912 160 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 TOMM6Q96B49 74 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 HHLA3Q9XRX5 114 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 IGHG4P01861 327 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 SPINK8P0C7L1 97 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 C11orf71Q6IPW1 123 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 ZFP2Q6ZN57 461 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 OPRPNQ99935 248 aaPredicted RBP5.19□□□□□ -1.58
RTN4-203ENST00000357376 TACC2O95359 2948 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 TRGV11A0A075B6L2 103 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 IGHV3-16A0A0C4DH30 117 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 IGHV4-59P01825 116 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 CKS1BP61024 79 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 ZNF292O60281 2723 aa5.19□□□□□ -1.58
RTN4-203ENST00000357376 IGHV1OR15-1A0A075B7D0 117 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 IGHV4-30-2A0A087WSY4 118 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 IGHV3-38A0A0C4DH36 116 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 NRGNQ92686 78 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 PTH2Q96A98 100 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 PLEKHB2Q96CS7 222 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 A0A1W2PPR1 153 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 SNCGO76070 127 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 TRPT1Q86TN4 253 aaKnown RBP5.18□□□□□ -1.58
RTN4-203ENST00000357376 ZFAND2AQ8N6M9 145 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 ZNF625Q96I27 306 aaPredicted RBP5.18□□□□□ -1.58
RTN4-203ENST00000357376 DCHS1Q96JQ0 3298 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 ZFHX4Q86UP3 3567 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 TRAV12-1A0A0B4J245 112 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 E9PLD3 99 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 TMEM141Q96I45 108 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 TIMM21Q9BVV7 248 aa5.18□□□□□ -1.58
RTN4-203ENST00000357376 C19orf84I3L1E1 186 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 IGHV3-53P01767 116 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 CIRBPQ14011 172 aaKnown RBP5.17□□□□□ -1.58
RTN4-203ENST00000357376 TM2D2Q9BX73 214 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 CNFNQ9BYD5 112 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 MDFICQ9P1T7 246 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 PRO1854Q9UHT4 67 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 TNRC18O15417 2968 aaPredicted RBP5.17□□□□□ -1.58
RTN4-203ENST00000357376 DEFB136Q30KP8 78 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 UFSP1Q6NVU6 142 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 A0A0J9YXV3 536 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 COX6B1P14854 86 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 TTC32Q5I0X7 151 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 Q8N1Y9 231 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 AGRNO00468 2067 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 ATMQ13315 3056 aa5.17□□□□□ -1.58
RTN4-203ENST00000357376 I3L3M4 83 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 DEFB112Q30KQ8 113 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 NEXN-AS1Q8NBZ9 246 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 UBE2E2Q96LR5 201 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 SPAG8Q99932 426 aaPredicted RBP5.16□□□□□ -1.58
RTN4-203ENST00000357376 TOMM7Q9P0U1 55 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 ZFYVE26Q68DK2 2539 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 UBE2L6O14933 153 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 C19orf54Q5BKX5 351 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 TCTEX1D4Q5JR98 221 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 DMXL1Q9Y485 3027 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 Q6ZS46 218 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.16□□□□□ -1.58
RTN4-203ENST00000357376 A4D1N5 150 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 M0R2P5 195 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 TEX29Q8N6K0 151 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 ANAPC13Q9BS18 74 aa5.16□□□□□ -1.58
RTN4-203ENST00000357376 IGHG2P01859 326 aa5.15□□□□□ -1.58
RTN4-203ENST00000357376 EDN2P20800 178 aa5.15□□□□□ -1.58
RTN4-203ENST00000357376 C10orf99Q6UWK7 81 aa5.15□□□□□ -1.58
RTN4-203ENST00000357376 PPDPFLQ8WWR9 84 aa5.15□□□□□ -1.58
RTN4-203ENST00000357376 TRGV1A0A0A0MS02 117 aa5.15□□□□□ -1.59
RTN4-203ENST00000357376 TRAV13-1A0A0B4J241 112 aa5.15□□□□□ -1.59
RTN4-203ENST00000357376 RNF223E7ERA6 249 aa5.15□□□□□ -1.59
RTN4-203ENST00000357376 SPANXB1Q9NS25 103 aaPredicted RBP5.15□□□□□ -1.59
RTN4-203ENST00000357376 XCL2Q9UBD3 114 aa5.15□□□□□ -1.59
RTN4-203ENST00000357376 LRRK2Q5S007 2527 aa5.15□□□□□ -1.59
RTN4-203ENST00000357376 TRBV20-1A0A075B6N2 111 aa5.15□□□□□ -1.59
RTN4-203ENST00000357376 SLC25A20O43772 301 aa5.15□□□□□ -1.59
RTN4-203ENST00000357376 RNASE3P12724 160 aaKnown RBP5.15□□□□□ -1.59
RTN4-203ENST00000357376 INSL3P51460 131 aa5.15□□□□□ -1.59
RTN4-203ENST00000357376 CEMP1Q6PRD7 247 aaPredicted RBP5.15□□□□□ -1.59
RTN4-203ENST00000357376 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.14□□□□□ -1.59
RTN4-203ENST00000357376 IGKV2-29A2NJV5 120 aaPredicted RBP5.14□□□□□ -1.59
RTN4-203ENST00000357376 TSPAN13O95857 204 aa5.14□□□□□ -1.59
RTN4-203ENST00000357376 HOXD3P31249 432 aaPredicted RBP5.14□□□□□ -1.59
RTN4-203ENST00000357376 C2orf82Q6UX34 121 aa5.14□□□□□ -1.59
RTN4-203ENST00000357376 COX8CQ7Z4L0 72 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms