RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 C7orf33Q8WU49 177 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 RS1O15537 224 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 Q6ZVH6 145 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 ADORA2A-AS1P86434 159 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 SPATA12Q7Z6I5 190 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 TMEM263Q8WUH6 116 aaKnown RBP4.29□□□□□ -1.72
PTPRD-202ENST00000356435 GTSF1Q8WW33 167 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 K7EMT4 169 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 SEM1Q6ZVN7 128 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 DEFB4AO15263 64 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 SHISA2Q6UWI4 295 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 ESM1Q9NQ30 184 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 DIDO1Q9BTC0 2240 aaKnown RBP4.29□□□□□ -1.72
PTPRD-202ENST00000356435 C10orf142B7Z368 130 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 K7ERJ3 54 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 IGFL2Q6UWQ7 119 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 UBE2D1P51668 147 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 SMIM20Q8N5G0 67 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 A0A1W2PPM0 123 aa4.29□□□□□ -1.72
PTPRD-202ENST00000356435 IGLV11-55A0A075B6I3 123 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 ZFP36P26651 326 aaKnown RBP4.28□□□□□ -1.72
PTPRD-202ENST00000356435 NOTCH2Q04721 2471 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 COX7BP24311 80 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 NRGNQ92686 78 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 LRCOL1A6NCL2 159 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 MED14OSP0DP75 135 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 KLK12Q9UKR0 248 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 MED12LQ86YW9 2145 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 NBASA2RRP1 2371 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 I3L2K1 104 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 NUPR1O60356 82 aa4.28□□□□□ -1.72
PTPRD-202ENST00000356435 LOXL1Q08397 574 aaPredicted RBP4.28□□□□□ -1.72
PTPRD-202ENST00000356435 IGKV2-24A0A0C4DH68 120 aa4.28□□□□□ -1.73
PTPRD-202ENST00000356435 IGKV4-1P06312 121 aa4.28□□□□□ -1.73
PTPRD-202ENST00000356435 PRR20EP86478 221 aa4.28□□□□□ -1.73
PTPRD-202ENST00000356435 PRR20CP86479 221 aa4.28□□□□□ -1.73
PTPRD-202ENST00000356435 PRR20DP86480 221 aa4.28□□□□□ -1.73
PTPRD-202ENST00000356435 PRR20BP86481 221 aa4.28□□□□□ -1.73
PTPRD-202ENST00000356435 PRR20AP86496 221 aa4.28□□□□□ -1.73
PTPRD-202ENST00000356435 Q8N1Y9 231 aa4.28□□□□□ -1.73
PTPRD-202ENST00000356435 FGF23Q9GZV9 251 aaPredicted RBP4.28□□□□□ -1.73
PTPRD-202ENST00000356435 FAM208BQ5VWN6 2430 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 ALPK2Q86TB3 2170 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 CRYGDP07320 174 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 BLCAPP62952 87 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 GAGE12HA6NDE8 117 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 IGLL1P15814 213 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 TP53TG3Q9ULZ0 132 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 LYRM9A8MSI8 78 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 C17orf77Q96MU5 243 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 PRO0255Q9UI72 69 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 PCNX1Q96RV3 2341 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 PDE6GP18545 87 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 UPK3BQ9BT76 320 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 DKK2Q9UBU2 259 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 ZNF706Q9Y5V0 76 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-202ENST00000356435 CTSGP08311 255 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 RPL39LQ96EH5 51 aaKnown RBP4.27□□□□□ -1.73
PTPRD-202ENST00000356435 JMJD7-PLA2G4BH0Y9G9 81 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 TRBV12-3P01733 135 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 LINC00310P59036 64 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 NTN5Q8WTR8 489 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-202ENST00000356435 PSMB8P28062 276 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 C12orf74Q32Q52 190 aa4.27□□□□□ -1.73
PTPRD-202ENST00000356435 MUSTN1Q8IVN3 82 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 COL4A2P08572 1712 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 K7ERS5 55 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 NUP210Q8TEM1 1887 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-202ENST00000356435 ACACBO00763 2458 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 PI4KAP42356 2102 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 SMIM9A6NGZ8 99 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 ETDBQ3ZM63 59 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 HIGD2BQ4VC39 106 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 NOTCH3Q9UM47 2321 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 A0A087WZ39 114 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 NFE4Q86UQ8 179 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 K7EIM0 57 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 TDRG1Q3Y452 100 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 NDUFC2O95298 119 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 MAP6D1Q9H9H5 199 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 DENND4CQ5VZ89 1909 aa4.26□□□□□ -1.73
PTPRD-202ENST00000356435 TAX1BP3O14907 124 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 TMEM61Q8N0U2 210 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 TET1Q8NFU7 2136 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 FANCMQ8IYD8 2048 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 A0A0B4J2C4 111 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 UFSP1Q6NVU6 142 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 C11orf53Q8IXP5 236 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 TRBV10-2A0A0K0K1G8 114 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 IGKV1-17P01599 117 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 WT1P19544 449 aaPredicted RBP4.25□□□□□ -1.73
PTPRD-202ENST00000356435 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 CADP27708 2225 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 Q8N976 141 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 PRORYQ9H606 182 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 A0A0J9YXV3 536 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 SIRPDQ9H106 197 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 HELZP42694 1942 aaKnown RBP4.25□□□□□ -1.73
PTPRD-202ENST00000356435 A6NDX4 124 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms