RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 PPP1R17O96001 155 aa11.48□□□□□ -0.57
VAT1-201ENST00000355653 SAA4P35542 130 aa11.48□□□□□ -0.57
VAT1-201ENST00000355653 AKAP6Q13023 2319 aa11.48□□□□□ -0.57
VAT1-201ENST00000355653 A4D1N5 150 aa11.47□□□□□ -0.57
VAT1-201ENST00000355653 J3QQQ9 107 aa11.47□□□□□ -0.57
VAT1-201ENST00000355653 TRBV12-3P01733 135 aa11.47□□□□□ -0.57
VAT1-201ENST00000355653 VCX2Q9H322 139 aa11.47□□□□□ -0.57
VAT1-201ENST00000355653 TRAV2A0A0B4J234 112 aa11.47□□□□□ -0.57
VAT1-201ENST00000355653 Q1RN00 199 aa11.46□□□□□ -0.57
VAT1-201ENST00000355653 FAM74A4Q5TZK3 123 aa11.46□□□□□ -0.57
VAT1-201ENST00000355653 SUMO4Q6EEV6 95 aa11.46□□□□□ -0.57
VAT1-201ENST00000355653 SBSPONQ8IVN8 264 aa11.46□□□□□ -0.57
VAT1-201ENST00000355653 OPRPNQ99935 248 aaPredicted RBP11.46□□□□□ -0.57
VAT1-201ENST00000355653 ZNF256Q9Y2P7 627 aaPredicted RBP11.46□□□□□ -0.57
VAT1-201ENST00000355653 OVOL1O14753 267 aa11.46□□□□□ -0.58
VAT1-201ENST00000355653 C1orf122Q6ZSJ8 110 aa11.46□□□□□ -0.58
VAT1-201ENST00000355653 IGHV1-69DA0A0B4J2H0 117 aa11.45□□□□□ -0.58
VAT1-201ENST00000355653 SIRPDQ9H106 197 aa11.45□□□□□ -0.58
VAT1-201ENST00000355653 SDHAF1A6NFY7 115 aa11.45□□□□□ -0.58
VAT1-201ENST00000355653 SRD5A1P18405 259 aa11.45□□□□□ -0.58
VAT1-201ENST00000355653 BEX4Q9NWD9 120 aaPredicted RBP11.45□□□□□ -0.58
VAT1-201ENST00000355653 ATRXP46100 2492 aa11.45□□□□□ -0.58
VAT1-201ENST00000355653 TMEM262E9PQX1 116 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 CCL21O00585 134 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 K7ENP7 123 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 AJUBAQ96IF1 538 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 B5MCH6 92 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 VCYO14598 125 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 IGHV3-11P01762 117 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 IGHV4-39P01824 125 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 LINC00315P59091 139 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 TMEM141Q96I45 108 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 AMELXQ99217 191 aa11.44□□□□□ -0.58
VAT1-201ENST00000355653 IGHV3OR16-10A0A075B7F0 116 aa11.43□□□□□ -0.58
VAT1-201ENST00000355653 EIF4EBP3O60516 100 aaPredicted RBP11.43□□□□□ -0.58
VAT1-201ENST00000355653 POLR2KP53803 58 aaKnown RBP11.43□□□□□ -0.58
VAT1-201ENST00000355653 KIF25-AS1Q9Y6Z4 181 aa11.43□□□□□ -0.58
VAT1-201ENST00000355653 TRAV41A0A0B4J266 112 aa11.43□□□□□ -0.58
VAT1-201ENST00000355653 ZNF876PQ49A33 203 aa11.43□□□□□ -0.58
VAT1-201ENST00000355653 NTN5Q8WTR8 489 aaPredicted RBP11.43□□□□□ -0.58
VAT1-201ENST00000355653 SNCGO76070 127 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 ELANEP08246 267 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 UBE2E1P51965 193 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 FAM159AQ6UWV7 190 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 TIMM17AQ99595 171 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 COL12A1Q99715 3063 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 SOCS3O14543 225 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 IGHV3-33P01772 117 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 MED14OSP0DP75 135 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 MUSTN1Q8IVN3 82 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 C5orf56Q8N8D9 126 aa11.42□□□□□ -0.58
VAT1-201ENST00000355653 TRAV4A0A0B4J268 109 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 GAGE5Q13069 117 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 GAGE6Q13070 117 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 CRLF1O75462 422 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 GAGE2BQ13066 116 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 KLK9Q2XQG4 91 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 GAGE2EQ4V326 116 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 GAGE2DQ9UEU5 116 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 KLK9Q9UKQ9 250 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 IGF2RP11717 2491 aa11.41□□□□□ -0.58
VAT1-201ENST00000355653 IGHV4OR15-8A0A075B7B6 117 aa11.4□□□□□ -0.58
VAT1-201ENST00000355653 A0A087WW49 117 aa11.4□□□□□ -0.58
VAT1-201ENST00000355653 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
VAT1-201ENST00000355653 CITED1Q99966 193 aa11.4□□□□□ -0.58
VAT1-201ENST00000355653 ZNF580Q9UK33 172 aa11.4□□□□□ -0.58
VAT1-201ENST00000355653 VPS13CQ709C8 3753 aa11.4□□□□□ -0.58
VAT1-201ENST00000355653 COL6A6A6NMZ7 2263 aa11.4□□□□□ -0.58
VAT1-201ENST00000355653 TRAV12-3A0A0B4J271 114 aa11.4□□□□□ -0.58
VAT1-201ENST00000355653 TEX49A0A1B0GTD5 131 aa11.39□□□□□ -0.59
VAT1-201ENST00000355653 ADARB2-AS1A8MUL3 147 aa11.39□□□□□ -0.59
VAT1-201ENST00000355653 ZNF56Q15929 161 aa11.39□□□□□ -0.59
VAT1-201ENST00000355653 C11orf71Q6IPW1 123 aa11.39□□□□□ -0.59
VAT1-201ENST00000355653 Q8N1Y9 231 aa11.39□□□□□ -0.59
VAT1-201ENST00000355653 FAM19A4Q96LR4 140 aa11.39□□□□□ -0.59
VAT1-201ENST00000355653 NBL1P41271 181 aa11.38□□□□□ -0.59
VAT1-201ENST00000355653 ADORA2A-AS1P86434 159 aa11.38□□□□□ -0.59
VAT1-201ENST00000355653 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
VAT1-201ENST00000355653 SPTAN1Q13813 2472 aaKnown RBP11.38□□□□□ -0.59
VAT1-201ENST00000355653 TMEM223A0PJW6 202 aa11.38□□□□□ -0.59
VAT1-201ENST00000355653 FAM223BA6NKX1 122 aa11.38□□□□□ -0.59
VAT1-201ENST00000355653 NPFFO15130 113 aa11.38□□□□□ -0.59
VAT1-201ENST00000355653 NHLRC4P0CG21 123 aaPredicted RBP11.38□□□□□ -0.59
VAT1-201ENST00000355653 FBXL19-AS1Q494R0 122 aa11.38□□□□□ -0.59
VAT1-201ENST00000355653 FAM223AQ8IWN6 122 aa11.38□□□□□ -0.59
VAT1-201ENST00000355653 LEPROTO15243 131 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 NXPH4O95158 308 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 ATXN8Q156A1 80 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 SHISA2Q6UWI4 295 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 MAP1AP78559 2803 aaPredicted RBP11.37□□□□□ -0.59
VAT1-201ENST00000355653 RHODO00212 210 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 NDUFA4O00483 81 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 RPL32P62910 135 aaKnown RBP11.37□□□□□ -0.59
VAT1-201ENST00000355653 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 A0A0J9YXV3 536 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 TRBV27A0A0K0K1C4 114 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 NDUFV3P56181 108 aaKnown RBP11.37□□□□□ -0.59
VAT1-201ENST00000355653 TTC32Q5I0X7 151 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms