RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 CD300EQ496F6 205 aaPredicted RBP13.6□□□□□ -0.23
SPNS3-201ENST00000355530 MORN3Q6PF18 240 aaPredicted RBP13.6□□□□□ -0.23
SPNS3-201ENST00000355530 CHD8Q9HCK8 2581 aa13.6□□□□□ -0.23
SPNS3-201ENST00000355530 WFDC2Q14508 124 aa13.6□□□□□ -0.23
SPNS3-201ENST00000355530 TMEM95Q3KNT9 176 aa13.6□□□□□ -0.23
SPNS3-201ENST00000355530 SYT8Q8NBV8 401 aa13.6□□□□□ -0.23
SPNS3-201ENST00000355530 PLEKHB2Q96CS7 222 aa13.6□□□□□ -0.23
SPNS3-201ENST00000355530 IGHV3-16A0A0C4DH30 117 aa13.59□□□□□ -0.23
SPNS3-201ENST00000355530 B4DSR2 109 aa13.59□□□□□ -0.23
SPNS3-201ENST00000355530 J3QR89 54 aa13.59□□□□□ -0.23
SPNS3-201ENST00000355530 GAGE13Q4V321 117 aa13.59□□□□□ -0.23
SPNS3-201ENST00000355530 WFDC12Q8WWY7 111 aa13.59□□□□□ -0.23
SPNS3-201ENST00000355530 ZNF688P0C7X2 276 aa13.58□□□□□ -0.23
SPNS3-201ENST00000355530 SNRPD3P62318 126 aaKnown RBP13.58□□□□□ -0.23
SPNS3-201ENST00000355530 RPL39P62891 51 aaKnown RBP13.58□□□□□ -0.23
SPNS3-201ENST00000355530 SRSF9Q13242 221 aaKnown RBP eCLIP13.58□□□□□ -0.23
SPNS3-201ENST00000355530 AMTNQ6UX39 209 aa13.58□□□□□ -0.23
SPNS3-201ENST00000355530 PGPEP1Q9NXJ5 209 aa13.58□□□□□ -0.23
SPNS3-201ENST00000355530 A0A0J9YX75 114 aa13.58□□□□□ -0.24
SPNS3-201ENST00000355530 GATA3P23771 443 aa13.58□□□□□ -0.24
SPNS3-201ENST00000355530 UBE2D1P51668 147 aa13.58□□□□□ -0.24
SPNS3-201ENST00000355530 MRPL16Q9NX20 251 aaKnown RBP13.58□□□□□ -0.24
SPNS3-201ENST00000355530 TMEM89A2RUT3 159 aa13.57□□□□□ -0.24
SPNS3-201ENST00000355530 AVPP01185 164 aa13.57□□□□□ -0.24
SPNS3-201ENST00000355530 FAM74A4Q5TZK3 123 aa13.57□□□□□ -0.24
SPNS3-201ENST00000355530 PRO0461Q9UI25 63 aa13.57□□□□□ -0.24
SPNS3-201ENST00000355530 KLHL30-AS1Q8NEE0 82 aa13.57□□□□□ -0.24
SPNS3-201ENST00000355530 EMP1P54849 157 aa13.56□□□□□ -0.24
SPNS3-201ENST00000355530 ZNF876PQ49A33 203 aa13.56□□□□□ -0.24
SPNS3-201ENST00000355530 K7EQG2 157 aa13.55□□□□□ -0.24
SPNS3-201ENST00000355530 RHOHQ15669 191 aa13.55□□□□□ -0.24
SPNS3-201ENST00000355530 ZNF56Q15929 161 aa13.55□□□□□ -0.24
SPNS3-201ENST00000355530 NSUN5P1Q3KNT7 163 aa13.55□□□□□ -0.24
SPNS3-201ENST00000355530 A0A0J9YY99 117 aa13.55□□□□□ -0.24
SPNS3-201ENST00000355530 M0QY20 66 aa13.55□□□□□ -0.24
SPNS3-201ENST00000355530 MDFICQ9P1T7 246 aa13.55□□□□□ -0.24
SPNS3-201ENST00000355530 VPS13CQ709C8 3753 aa13.54□□□□□ -0.24
SPNS3-201ENST00000355530 TRAV12-2A0A075B6T6 113 aa13.54□□□□□ -0.24
SPNS3-201ENST00000355530 IGHV4-59P01825 116 aa13.54□□□□□ -0.24
SPNS3-201ENST00000355530 ETDBQ3ZM63 59 aa13.54□□□□□ -0.24
SPNS3-201ENST00000355530 Q8N1Y9 231 aa13.54□□□□□ -0.24
SPNS3-201ENST00000355530 IGHV1OR15-1A0A075B7D0 117 aa13.54□□□□□ -0.24
SPNS3-201ENST00000355530 TMEM170BQ5T4T1 132 aa13.54□□□□□ -0.24
SPNS3-201ENST00000355530 TRPT1Q86TN4 253 aaKnown RBP13.54□□□□□ -0.24
SPNS3-201ENST00000355530 DEFB104AQ8WTQ1 72 aa13.54□□□□□ -0.24
SPNS3-201ENST00000355530 DLX4Q92988 240 aaPredicted RBP13.53□□□□□ -0.24
SPNS3-201ENST00000355530 ZNF256Q9Y2P7 627 aaPredicted RBP13.53□□□□□ -0.24
SPNS3-201ENST00000355530 TMEM238C9JI98 176 aa13.52□□□□□ -0.24
SPNS3-201ENST00000355530 IGKV3-20P01619 116 aa13.52□□□□□ -0.24
SPNS3-201ENST00000355530 SH2D6Q7Z4S9 175 aa13.52□□□□□ -0.24
SPNS3-201ENST00000355530 ZNRF2Q8NHG8 242 aa13.52□□□□□ -0.24
SPNS3-201ENST00000355530 TSPAN13O95857 204 aa13.52□□□□□ -0.25
SPNS3-201ENST00000355530 DSCR9P59020 149 aa13.52□□□□□ -0.25
SPNS3-201ENST00000355530 TSPEAR-AS2P59090 65 aa13.52□□□□□ -0.25
SPNS3-201ENST00000355530 DEFB112Q30KQ8 113 aa13.52□□□□□ -0.25
SPNS3-201ENST00000355530 LYRM7Q5U5X0 104 aa13.52□□□□□ -0.25
SPNS3-201ENST00000355530 NFE4Q86UQ8 179 aa13.52□□□□□ -0.25
SPNS3-201ENST00000355530 SPINK13Q1W4C9 94 aa13.51□□□□□ -0.25
SPNS3-201ENST00000355530 C10orf99Q6UWK7 81 aa13.51□□□□□ -0.25
SPNS3-201ENST00000355530 MTURNQ8N3F0 131 aa13.51□□□□□ -0.25
SPNS3-201ENST00000355530 TSSC4Q9Y5U2 329 aaPredicted RBP13.51□□□□□ -0.25
SPNS3-201ENST00000355530 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.5□□□□□ -0.25
SPNS3-201ENST00000355530 SLC25A29Q8N8R3 303 aa13.5□□□□□ -0.25
SPNS3-201ENST00000355530 J3QQQ9 107 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 UBE2D3P61077 147 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 UBE2D2P62837 147 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 NDUFA11Q86Y39 141 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 AMELXQ99217 191 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 SPAG8Q99932 426 aaPredicted RBP13.49□□□□□ -0.25
SPNS3-201ENST00000355530 TRGV11A0A075B6L2 103 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 GAGE12HA6NDE8 117 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 IGHV3-30P01768 117 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 IGHV3-30-5P0DP03 117 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 LGALS3P17931 250 aaKnown RBP13.49□□□□□ -0.25
SPNS3-201ENST00000355530 SYNJ2BPP57105 145 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 CFAP126Q5VTH2 177 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 RNF152Q8N8N0 203 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 SPATA25Q9BR10 227 aa13.49□□□□□ -0.25
SPNS3-201ENST00000355530 APOMO95445 188 aa13.48□□□□□ -0.25
SPNS3-201ENST00000355530 SIGMAR1Q99720 223 aa13.48□□□□□ -0.25
SPNS3-201ENST00000355530 I3L3M4 83 aa13.48□□□□□ -0.25
SPNS3-201ENST00000355530 LINC01356Q8N9X3 169 aa13.48□□□□□ -0.25
SPNS3-201ENST00000355530 C20orf203Q8NBC4 194 aa13.48□□□□□ -0.25
SPNS3-201ENST00000355530 ATP6V0E2Q8NHE4 81 aa13.48□□□□□ -0.25
SPNS3-201ENST00000355530 LOC107984156A0A0G2JMH3 177 aa13.47□□□□□ -0.25
SPNS3-201ENST00000355530 SCGB1A1P11684 91 aa13.47□□□□□ -0.25
SPNS3-201ENST00000355530 ARL17AQ8IVW1 177 aa13.47□□□□□ -0.25
SPNS3-201ENST00000355530 COL12A1Q99715 3063 aa13.46□□□□□ -0.25
SPNS3-201ENST00000355530 TMEM223A0PJW6 202 aa13.46□□□□□ -0.26
SPNS3-201ENST00000355530 J3QLI3 93 aa13.46□□□□□ -0.26
SPNS3-201ENST00000355530 LEPROTO15243 131 aa13.46□□□□□ -0.26
SPNS3-201ENST00000355530 P0DMU3 169 aa13.46□□□□□ -0.26
SPNS3-201ENST00000355530 FAM231AP0DMU4 169 aa13.46□□□□□ -0.26
SPNS3-201ENST00000355530 FAM231CP0DMU5 169 aa13.46□□□□□ -0.26
SPNS3-201ENST00000355530 AZU1P20160 251 aa13.46□□□□□ -0.26
SPNS3-201ENST00000355530 C1QTNF4Q9BXJ3 329 aa13.46□□□□□ -0.26
SPNS3-201ENST00000355530 CELSR2Q9HCU4 2923 aa13.46□□□□□ -0.26
SPNS3-201ENST00000355530 ELANEP08246 267 aa13.45□□□□□ -0.26
SPNS3-201ENST00000355530 PSMB2P49721 201 aa13.45□□□□□ -0.26
SPNS3-201ENST00000355530 GTSF1LQ9H1H1 148 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms