RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SS18Q15532 418 aa9.47□□□□□ -0.89
COLCA1-201ENST00000355430 TRAV8-3A0A0A6YYJ7 113 aa9.47□□□□□ -0.89
COLCA1-201ENST00000355430 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
COLCA1-201ENST00000355430 A6NDX4 124 aa9.47□□□□□ -0.89
COLCA1-201ENST00000355430 Q6YL49 198 aa9.47□□□□□ -0.89
COLCA1-201ENST00000355430 Q8N976 141 aa9.47□□□□□ -0.89
COLCA1-201ENST00000355430 J3QQQ9 107 aa9.46□□□□□ -0.89
COLCA1-201ENST00000355430 PRO1854Q9UHT4 67 aa9.46□□□□□ -0.89
COLCA1-201ENST00000355430 RBMY1BA6NDE4 496 aaKnown RBP9.46□□□□□ -0.89
COLCA1-201ENST00000355430 RBMY1EA6NEQ0 496 aaKnown RBP9.46□□□□□ -0.89
COLCA1-201ENST00000355430 IGHG2P01859 326 aa9.46□□□□□ -0.89
COLCA1-201ENST00000355430 RBMY1DP0C7P1 496 aaKnown RBP9.46□□□□□ -0.89
COLCA1-201ENST00000355430 RBMY1A1P0DJD3 496 aaKnown RBP9.46□□□□□ -0.89
COLCA1-201ENST00000355430 RBMY1CP0DJD4 496 aa9.46□□□□□ -0.89
COLCA1-201ENST00000355430 HIGD1BQ9P298 99 aa9.46□□□□□ -0.9
COLCA1-201ENST00000355430 ANKHD1Q8IWZ3 2542 aaKnown RBP9.46□□□□□ -0.9
COLCA1-201ENST00000355430 GHRHP01286 108 aa9.46□□□□□ -0.9
COLCA1-201ENST00000355430 FGF6P10767 208 aa9.46□□□□□ -0.9
COLCA1-201ENST00000355430 ARFGEF3Q5TH69 2177 aa9.46□□□□□ -0.9
COLCA1-201ENST00000355430 CRYGBP07316 175 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 CRIP1P50238 77 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 FSTL3O95633 263 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 IGHV3-16A0A0C4DH30 117 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 MED13LQ71F56 2210 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 IGHV4OR15-8A0A075B7B6 117 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 A0A087WW49 117 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 TRAV13-1A0A0B4J241 112 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 WFDC2Q14508 124 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 RASL10AQ92737 203 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 ZNF625Q96I27 306 aaPredicted RBP9.45□□□□□ -0.9
COLCA1-201ENST00000355430 LENEPQ9Y5L5 61 aa9.45□□□□□ -0.9
COLCA1-201ENST00000355430 PAX4O43316 350 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 DEFB1P60022 68 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 GAGE4Q13068 117 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 GAGE5Q13069 117 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
COLCA1-201ENST00000355430 TANC2Q9HCD6 1990 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 LINC00158P58513 81 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 IGLV2-11P01706 119 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 C11orf71Q6IPW1 123 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 C16orf54Q6UWD8 224 aa9.44□□□□□ -0.9
COLCA1-201ENST00000355430 IGHV3-38A0A0C4DH36 116 aa9.43□□□□□ -0.9
COLCA1-201ENST00000355430 CCL18P55774 89 aa9.43□□□□□ -0.9
COLCA1-201ENST00000355430 SUMO4Q6EEV6 95 aa9.43□□□□□ -0.9
COLCA1-201ENST00000355430 ZNF48Q96MX3 618 aaPredicted RBP9.43□□□□□ -0.9
COLCA1-201ENST00000355430 SPG11Q96JI7 2443 aa9.43□□□□□ -0.9
COLCA1-201ENST00000355430 G3V4G9 280 aa9.43□□□□□ -0.9
COLCA1-201ENST00000355430 H3BMM0 161 aa9.43□□□□□ -0.9
COLCA1-201ENST00000355430 C9orf47Q6ZRZ4 202 aa9.43□□□□□ -0.9
COLCA1-201ENST00000355430 UBE2WQ96B02 151 aa9.43□□□□□ -0.9
COLCA1-201ENST00000355430 C11orf68Q9H3H3 251 aaKnown RBP9.43□□□□□ -0.9
COLCA1-201ENST00000355430 SLC25A20O43772 301 aa9.43□□□□□ -0.9
COLCA1-201ENST00000355430 SRSF2Q01130 221 aaKnown RBP9.42□□□□□ -0.9
COLCA1-201ENST00000355430 BAALCQ8WXS3 180 aa9.42□□□□□ -0.9
COLCA1-201ENST00000355430 VWC2LB2RUY7 222 aa9.42□□□□□ -0.9
COLCA1-201ENST00000355430 RNF152Q8N8N0 203 aa9.42□□□□□ -0.9
COLCA1-201ENST00000355430 TOMM6Q96B49 74 aa9.42□□□□□ -0.9
COLCA1-201ENST00000355430 ZNF561-AS1K7EIQ3 104 aa9.41□□□□□ -0.9
COLCA1-201ENST00000355430 IGLC6P0CF74 106 aa9.41□□□□□ -0.9
COLCA1-201ENST00000355430 PRIMA1Q86XR5 153 aa9.41□□□□□ -0.9
COLCA1-201ENST00000355430 NDUFA12Q9UI09 145 aa9.41□□□□□ -0.9
COLCA1-201ENST00000355430 TRAV12-1A0A0B4J245 112 aa9.41□□□□□ -0.9
COLCA1-201ENST00000355430 IGF2RP11717 2491 aa9.41□□□□□ -0.9
COLCA1-201ENST00000355430 ZFP2Q6ZN57 461 aa9.41□□□□□ -0.9
COLCA1-201ENST00000355430 RBX1P62877 108 aa9.41□□□□□ -0.9
COLCA1-201ENST00000355430 PKIGQ9Y2B9 76 aa9.4□□□□□ -0.9
COLCA1-201ENST00000355430 PLXNB1O43157 2135 aa9.4□□□□□ -0.9
COLCA1-201ENST00000355430 ATP5G1P05496 136 aa9.4□□□□□ -0.9
COLCA1-201ENST00000355430 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
COLCA1-201ENST00000355430 APRG1Q8IVJ8 170 aa9.4□□□□□ -0.9
COLCA1-201ENST00000355430 K7EMT4 169 aa9.4□□□□□ -0.91
COLCA1-201ENST00000355430 GPHB5Q86YW7 130 aa9.4□□□□□ -0.91
COLCA1-201ENST00000355430 C16orf74Q96GX8 76 aa9.4□□□□□ -0.91
COLCA1-201ENST00000355430 RHOHQ15669 191 aa9.39□□□□□ -0.91
COLCA1-201ENST00000355430 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
COLCA1-201ENST00000355430 C6orf226Q5I0X4 101 aa9.39□□□□□ -0.91
COLCA1-201ENST00000355430 LEPROTO15243 131 aa9.39□□□□□ -0.91
COLCA1-201ENST00000355430 ODF3BA8MYP8 253 aa9.39□□□□□ -0.91
COLCA1-201ENST00000355430 NOP10Q9NPE3 64 aaKnown RBP9.39□□□□□ -0.91
COLCA1-201ENST00000355430 C2orf91Q6ZV80 131 aa9.38□□□□□ -0.91
COLCA1-201ENST00000355430 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
COLCA1-201ENST00000355430 U3KQK5 164 aa9.38□□□□□ -0.91
COLCA1-201ENST00000355430 CFC1BP0CG36 223 aa9.38□□□□□ -0.91
COLCA1-201ENST00000355430 CFC1P0CG37 223 aa9.38□□□□□ -0.91
COLCA1-201ENST00000355430 CCDC140Q96MF4 163 aa9.38□□□□□ -0.91
COLCA1-201ENST00000355430 LY6LH3BQJ8 138 aa9.38□□□□□ -0.91
COLCA1-201ENST00000355430 HILS1P60008 231 aa9.38□□□□□ -0.91
COLCA1-201ENST00000355430 S100A7L2Q5SY68 101 aa9.38□□□□□ -0.91
COLCA1-201ENST00000355430 IGKV2D-26A0A0A0MRZ7 120 aa9.37□□□□□ -0.91
COLCA1-201ENST00000355430 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
COLCA1-201ENST00000355430 E9PLD3 99 aa9.37□□□□□ -0.91
COLCA1-201ENST00000355430 TRBV12-3P01733 135 aa9.37□□□□□ -0.91
COLCA1-201ENST00000355430 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
COLCA1-201ENST00000355430 TMEM243Q9BU79 118 aa9.37□□□□□ -0.91
COLCA1-201ENST00000355430 UNQ9165/PRO28630Q6UXU0 137 aa9.37□□□□□ -0.91
COLCA1-201ENST00000355430 ICOSQ9Y6W8 199 aa9.37□□□□□ -0.91
COLCA1-201ENST00000355430 TNRC6BQ9UPQ9 1833 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms