RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 ALKAL2Q6UX46 152 aa13.47□□□□□ -0.25
CLTA-202ENST00000345519 BOLA1Q9Y3E2 137 aa13.47□□□□□ -0.25
CLTA-202ENST00000345519 LY96Q9Y6Y9 160 aa13.46□□□□□ -0.25
CLTA-202ENST00000345519 BLOC1S1P78537 153 aa13.45□□□□□ -0.26
CLTA-202ENST00000345519 PRR27Q6MZM9 219 aa13.45□□□□□ -0.26
CLTA-202ENST00000345519 APOBP04114 4563 aaKnown RBP13.44□□□□□ -0.26
CLTA-202ENST00000345519 M0R381 172 aa13.44□□□□□ -0.26
CLTA-202ENST00000345519 NDUFS6O75380 124 aaKnown RBP13.44□□□□□ -0.26
CLTA-202ENST00000345519 GNG4P50150 75 aa13.44□□□□□ -0.26
CLTA-202ENST00000345519 LINC01556Q5JQF7 62 aa13.44□□□□□ -0.26
CLTA-202ENST00000345519 OR10AG1Q8NH19 301 aa13.44□□□□□ -0.26
CLTA-202ENST00000345519 GTSF1LQ9H1H1 148 aa13.44□□□□□ -0.26
CLTA-202ENST00000345519 RYR1P21817 5038 aa13.44□□□□□ -0.26
CLTA-202ENST00000345519 HSPG2P98160 4391 aa13.43□□□□□ -0.26
CLTA-202ENST00000345519 RAB19A4D1S5 217 aa13.43□□□□□ -0.26
CLTA-202ENST00000345519 IGLC6P0CF74 106 aa13.43□□□□□ -0.26
CLTA-202ENST00000345519 NKX2-5P52952 324 aaPredicted RBP13.43□□□□□ -0.26
CLTA-202ENST00000345519 LELP1Q5T871 98 aa13.43□□□□□ -0.26
CLTA-202ENST00000345519 C14orf178Q8N769 122 aaPredicted RBP13.43□□□□□ -0.26
CLTA-202ENST00000345519 ATP6V0E2Q8NHE4 81 aa13.43□□□□□ -0.26
CLTA-202ENST00000345519 Q9UF83 564 aa13.43□□□□□ -0.26
CLTA-202ENST00000345519 TRBV10-1A0A0K0K1A3 114 aa13.42□□□□□ -0.26
CLTA-202ENST00000345519 MED9Q9NWA0 146 aa13.42□□□□□ -0.26
CLTA-202ENST00000345519 TRAV9-2A0A087WT02 112 aa13.41□□□□□ -0.26
CLTA-202ENST00000345519 A0A087WWL8 130 aa13.41□□□□□ -0.26
CLTA-202ENST00000345519 IGHV3-38A0A0C4DH36 116 aa13.41□□□□□ -0.26
CLTA-202ENST00000345519 TMEM250H0YL14 139 aa13.41□□□□□ -0.26
CLTA-202ENST00000345519 C10orf126Q8N4M7 172 aa13.41□□□□□ -0.26
CLTA-202ENST00000345519 BIN3Q9NQY0 253 aa13.41□□□□□ -0.26
CLTA-202ENST00000345519 EVI2AP22794 236 aa13.4□□□□□ -0.26
CLTA-202ENST00000345519 FAM74A4Q5TZK3 123 aa13.4□□□□□ -0.26
CLTA-202ENST00000345519 NFE4Q86UQ8 179 aa13.4□□□□□ -0.26
CLTA-202ENST00000345519 OR10G8Q8NGN5 311 aa13.4□□□□□ -0.26
CLTA-202ENST00000345519 KIF25-AS1Q9Y6Z4 181 aa13.4□□□□□ -0.26
CLTA-202ENST00000345519 RPS20P60866 119 aaKnown RBP13.39□□□□□ -0.27
CLTA-202ENST00000345519 RAB4BP61018 213 aa13.39□□□□□ -0.27
CLTA-202ENST00000345519 TRAV8-6A0A0B4J262 113 aa13.38□□□□□ -0.27
CLTA-202ENST00000345519 RBFOX3A6NFN3 312 aa13.38□□□□□ -0.27
CLTA-202ENST00000345519 GAGE12JA6NER3 117 aa13.37□□□□□ -0.27
CLTA-202ENST00000345519 K7EN84 100 aa13.37□□□□□ -0.27
CLTA-202ENST00000345519 GAGE1Q13065 139 aa13.37□□□□□ -0.27
CLTA-202ENST00000345519 GAGE4Q13068 117 aa13.37□□□□□ -0.27
CLTA-202ENST00000345519 GAGE5Q13069 117 aa13.37□□□□□ -0.27
CLTA-202ENST00000345519 GAGE13Q4V321 117 aa13.37□□□□□ -0.27
CLTA-202ENST00000345519 MSRB1Q9NZV6 116 aa13.37□□□□□ -0.27
CLTA-202ENST00000345519 IBA57-AS1B1ANH7 110 aa13.36□□□□□ -0.27
CLTA-202ENST00000345519 P01737 135 aa13.36□□□□□ -0.27
CLTA-202ENST00000345519 FER1L6-AS1Q8NA97 138 aa13.36□□□□□ -0.27
CLTA-202ENST00000345519 OR2D3Q8NGH3 330 aa13.36□□□□□ -0.27
CLTA-202ENST00000345519 DAZAP1Q96EP5 407 aaKnown RBP13.36□□□□□ -0.27
CLTA-202ENST00000345519 CNFNQ9BYD5 112 aa13.36□□□□□ -0.27
CLTA-202ENST00000345519 A0A087WWC5 75 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 CTRLP40313 264 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 UBE2D3P61077 147 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 UBE2D2P62837 147 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 LAGE3Q14657 143 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 OR10J3Q5JRS4 329 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 SPANXN1Q5VSR9 72 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 FAM210AQ96ND0 272 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 AP1S3Q96PC3 154 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 TNFRSF18Q9Y5U5 241 aa13.35□□□□□ -0.27
CLTA-202ENST00000345519 TRBV7-3A0A075B6L6 115 aa13.34□□□□□ -0.27
CLTA-202ENST00000345519 XKRY2A2RUG3 117 aa13.34□□□□□ -0.27
CLTA-202ENST00000345519 F2Z2F3 143 aa13.34□□□□□ -0.27
CLTA-202ENST00000345519 GZMBP10144 247 aa13.34□□□□□ -0.27
CLTA-202ENST00000345519 OCC1Q8TAD7 63 aa13.34□□□□□ -0.27
CLTA-202ENST00000345519 CACNG7P62955 275 aa13.33□□□□□ -0.28
CLTA-202ENST00000345519 WDR73Q6P4I2 378 aa13.33□□□□□ -0.28
CLTA-202ENST00000345519 NUDT10Q8NFP7 164 aa13.33□□□□□ -0.28
CLTA-202ENST00000345519 NUDT11Q96G61 164 aa13.33□□□□□ -0.28
CLTA-202ENST00000345519 RPL36AP83881 106 aaKnown RBP13.32□□□□□ -0.28
CLTA-202ENST00000345519 FAM231DQ6ZW35 169 aa13.32□□□□□ -0.28
CLTA-202ENST00000345519 NEXN-AS1Q8NBZ9 246 aa13.32□□□□□ -0.28
CLTA-202ENST00000345519 RPL36ALQ969Q0 106 aaKnown RBP13.32□□□□□ -0.28
CLTA-202ENST00000345519 MUC21A0A0G2JKD1 596 aa13.31□□□□□ -0.28
CLTA-202ENST00000345519 MUC21A0A140T8X8 626 aa13.31□□□□□ -0.28
CLTA-202ENST00000345519 KRTAP10-2P60368 255 aa13.31□□□□□ -0.28
CLTA-202ENST00000345519 ZNF56Q15929 161 aa13.31□□□□□ -0.28
CLTA-202ENST00000345519 TOR2AQ5JU69 321 aa13.31□□□□□ -0.28
CLTA-202ENST00000345519 SPATA12Q7Z6I5 190 aa13.31□□□□□ -0.28
CLTA-202ENST00000345519 RNASE7Q9H1E1 156 aaKnown RBP13.3□□□□□ -0.28
CLTA-202ENST00000345519 RPP21Q9H633 154 aaKnown RBP13.3□□□□□ -0.28
CLTA-202ENST00000345519 PCLOQ9Y6V0 5065 aa13.29□□□□□ -0.28
CLTA-202ENST00000345519 C16orf90A8MZG2 172 aa13.29□□□□□ -0.28
CLTA-202ENST00000345519 ERVFC1-1P60608 527 aa13.29□□□□□ -0.28
CLTA-202ENST00000345519 TEX261Q6UWH6 196 aa13.29□□□□□ -0.28
CLTA-202ENST00000345519 CHCHD7Q9BUK0 85 aa13.29□□□□□ -0.28
CLTA-202ENST00000345519 A0A087WTM6 91 aa13.28□□□□□ -0.28
CLTA-202ENST00000345519 LYZL1Q6UWQ5 148 aa13.28□□□□□ -0.28
CLTA-202ENST00000345519 NIT1Q86X76 327 aa13.28□□□□□ -0.28
CLTA-202ENST00000345519 Q8N3U1 123 aa13.28□□□□□ -0.28
CLTA-202ENST00000345519 CDK2AP2O75956 126 aa13.27□□□□□ -0.29
CLTA-202ENST00000345519 SRP19P09132 144 aaKnown RBP13.27□□□□□ -0.29
CLTA-202ENST00000345519 CT83Q5H943 113 aa13.27□□□□□ -0.29
CLTA-202ENST00000345519 LRCOL1A6NCL2 159 aa13.26□□□□□ -0.29
CLTA-202ENST00000345519 M0QY20 66 aa13.26□□□□□ -0.29
CLTA-202ENST00000345519 IGHV3-30P01768 117 aa13.26□□□□□ -0.29
CLTA-202ENST00000345519 IGHV3-33P01772 117 aa13.26□□□□□ -0.29
CLTA-202ENST00000345519 TRGC1P0CF51 173 aa13.26□□□□□ -0.29
CLTA-202ENST00000345519 SMIM17P0DL12 118 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms