RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 TEN1Q86WV5 123 aa13.4□□□□□ -0.26
VHL-202ENST00000345392 LENEPQ9Y5L5 61 aa13.4□□□□□ -0.26
VHL-202ENST00000345392 SCGB1C2P0DMR2 95 aa13.39□□□□□ -0.27
VHL-202ENST00000345392 PPDPFLQ8WWR9 84 aa13.39□□□□□ -0.27
VHL-202ENST00000345392 PRB1P04280 392 aa13.39□□□□□ -0.27
VHL-202ENST00000345392 KLK9Q2XQG4 91 aa13.38□□□□□ -0.27
VHL-202ENST00000345392 KLK9Q9UKQ9 250 aa13.38□□□□□ -0.27
VHL-202ENST00000345392 IGIPA6NJ69 53 aa13.38□□□□□ -0.27
VHL-202ENST00000345392 IGHV3-30P01768 117 aa13.38□□□□□ -0.27
VHL-202ENST00000345392 IGHV3-30-5P0DP03 117 aa13.38□□□□□ -0.27
VHL-202ENST00000345392 KLRB1Q12918 225 aa13.38□□□□□ -0.27
VHL-202ENST00000345392 A0A087WWL8 130 aa13.37□□□□□ -0.27
VHL-202ENST00000345392 HERVK_113P61574 105 aa13.37□□□□□ -0.27
VHL-202ENST00000345392 CELSR2Q9HCU4 2923 aa13.37□□□□□ -0.27
VHL-202ENST00000345392 UBE2E1P51965 193 aa13.37□□□□□ -0.27
VHL-202ENST00000345392 PMVKQ15126 192 aa13.37□□□□□ -0.27
VHL-202ENST00000345392 ZNRF2Q8NHG8 242 aa13.37□□□□□ -0.27
VHL-202ENST00000345392 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
VHL-202ENST00000345392 SPG11Q96JI7 2443 aa13.37□□□□□ -0.27
VHL-202ENST00000345392 ANKRD29Q8N6D5 301 aa13.36□□□□□ -0.27
VHL-202ENST00000345392 BPESC1Q9GZL8 116 aa13.36□□□□□ -0.27
VHL-202ENST00000345392 A8MWV9 139 aa13.36□□□□□ -0.27
VHL-202ENST00000345392 LINC00315P59091 139 aa13.36□□□□□ -0.27
VHL-202ENST00000345392 CRYBG3Q68DQ2 2970 aa13.36□□□□□ -0.27
VHL-202ENST00000345392 F5H697 171 aa13.36□□□□□ -0.27
VHL-202ENST00000345392 LYRM7Q5U5X0 104 aa13.36□□□□□ -0.27
VHL-202ENST00000345392 C10orf126Q8N4M7 172 aa13.36□□□□□ -0.27
VHL-202ENST00000345392 C5orf56Q8N8D9 126 aa13.36□□□□□ -0.27
VHL-202ENST00000345392 OVOL1O14753 267 aa13.35□□□□□ -0.27
VHL-202ENST00000345392 SLC25A29Q8N8R3 303 aa13.35□□□□□ -0.27
VHL-202ENST00000345392 H7C2G1 150 aa13.35□□□□□ -0.27
VHL-202ENST00000345392 SOCS3O14543 225 aa13.35□□□□□ -0.27
VHL-202ENST00000345392 SRD5A1P18405 259 aa13.35□□□□□ -0.27
VHL-202ENST00000345392 KIF25-AS1Q9Y6Z4 181 aa13.35□□□□□ -0.27
VHL-202ENST00000345392 CSMD2Q7Z408 3487 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 TRAV41A0A0B4J266 112 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 CRIP2P52943 208 aaPredicted RBP13.34□□□□□ -0.27
VHL-202ENST00000345392 SUMO4Q6EEV6 95 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 BBC3Q96PG8 261 aaPredicted RBP13.34□□□□□ -0.27
VHL-202ENST00000345392 OPRPNQ99935 248 aaPredicted RBP13.34□□□□□ -0.27
VHL-202ENST00000345392 PRO1854Q9UHT4 67 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 ABCA2Q9BZC7 2435 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 TRBV20-1A0A075B6N2 111 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 PPP1R17O96001 155 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 IGHV3-11P01762 117 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 GATA3P23771 443 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 RNF183Q96D59 192 aa13.34□□□□□ -0.27
VHL-202ENST00000345392 ZNF688P0C7X2 276 aa13.33□□□□□ -0.28
VHL-202ENST00000345392 POLR2KP53803 58 aaKnown RBP13.33□□□□□ -0.28
VHL-202ENST00000345392 TRPT1Q86TN4 253 aaKnown RBP13.33□□□□□ -0.28
VHL-202ENST00000345392 CHD6Q8TD26 2715 aa13.33□□□□□ -0.28
VHL-202ENST00000345392 IGHV1-69DA0A0B4J2H0 117 aa13.33□□□□□ -0.28
VHL-202ENST00000345392 PAPPA-AS1Q5QFB9 102 aa13.33□□□□□ -0.28
VHL-202ENST00000345392 IGHV3-64A0A075B6Q5 118 aa13.32□□□□□ -0.28
VHL-202ENST00000345392 J3QQQ9 107 aa13.32□□□□□ -0.28
VHL-202ENST00000345392 BRD3OSQ6XYD6 125 aa13.32□□□□□ -0.28
VHL-202ENST00000345392 FAM19A4Q96LR4 140 aa13.32□□□□□ -0.28
VHL-202ENST00000345392 AMELXQ99217 191 aa13.32□□□□□ -0.28
VHL-202ENST00000345392 SDHAF1A6NFY7 115 aa13.32□□□□□ -0.28
VHL-202ENST00000345392 FAM74A4Q5TZK3 123 aa13.32□□□□□ -0.28
VHL-202ENST00000345392 SBSPONQ8IVN8 264 aa13.32□□□□□ -0.28
VHL-202ENST00000345392 ZNF256Q9Y2P7 627 aaPredicted RBP13.32□□□□□ -0.28
VHL-202ENST00000345392 A4D1N5 150 aa13.31□□□□□ -0.28
VHL-202ENST00000345392 EIF4EBP3O60516 100 aaPredicted RBP13.31□□□□□ -0.28
VHL-202ENST00000345392 ZNF462Q96JM2 2506 aa13.31□□□□□ -0.28
VHL-202ENST00000345392 IGHV4OR15-8A0A075B7B6 117 aa13.31□□□□□ -0.28
VHL-202ENST00000345392 A0A087WW49 117 aa13.31□□□□□ -0.28
VHL-202ENST00000345392 C9JAW5 83 aa13.31□□□□□ -0.28
VHL-202ENST00000345392 MED14OSP0DP75 135 aa13.31□□□□□ -0.28
VHL-202ENST00000345392 VCYO14598 125 aa13.3□□□□□ -0.28
VHL-202ENST00000345392 LGALS3P17931 250 aaKnown RBP13.3□□□□□ -0.28
VHL-202ENST00000345392 NPFFO15130 113 aa13.3□□□□□ -0.28
VHL-202ENST00000345392 ZNF876PQ49A33 203 aa13.3□□□□□ -0.28
VHL-202ENST00000345392 POM121L12Q8N7R1 296 aa13.3□□□□□ -0.28
VHL-202ENST00000345392 SLC25A20O43772 301 aa13.29□□□□□ -0.28
VHL-202ENST00000345392 TMEM141Q96I45 108 aa13.29□□□□□ -0.28
VHL-202ENST00000345392 TRAV2A0A0B4J234 112 aa13.29□□□□□ -0.28
VHL-202ENST00000345392 LMO4P61968 165 aa13.29□□□□□ -0.28
VHL-202ENST00000345392 FAM159AQ6UWV7 190 aa13.29□□□□□ -0.28
VHL-202ENST00000345392 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
VHL-202ENST00000345392 ERG28Q9UKR5 140 aa13.29□□□□□ -0.28
VHL-202ENST00000345392 FAM223BA6NKX1 122 aa13.28□□□□□ -0.28
VHL-202ENST00000345392 FAM223AQ8IWN6 122 aa13.28□□□□□ -0.28
VHL-202ENST00000345392 EDN2P20800 178 aa13.28□□□□□ -0.28
VHL-202ENST00000345392 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.28□□□□□ -0.28
VHL-202ENST00000345392 TRAV12-3A0A0B4J271 114 aa13.27□□□□□ -0.28
VHL-202ENST00000345392 NDUFA4O00483 81 aa13.27□□□□□ -0.28
VHL-202ENST00000345392 NXPH4O95158 308 aa13.27□□□□□ -0.28
VHL-202ENST00000345392 C19orf84I3L1E1 186 aa13.27□□□□□ -0.29
VHL-202ENST00000345392 ELANEP08246 267 aa13.27□□□□□ -0.29
VHL-202ENST00000345392 APRG1Q8IVJ8 170 aa13.27□□□□□ -0.29
VHL-202ENST00000345392 ANAPC13Q9BS18 74 aa13.27□□□□□ -0.29
VHL-202ENST00000345392 RHPN1-AS1Q9BWJ2 59 aa13.27□□□□□ -0.29
VHL-202ENST00000345392 MYO18BQ8IUG5 2567 aa13.27□□□□□ -0.29
VHL-202ENST00000345392 LY6EQ16553 131 aa13.26□□□□□ -0.29
VHL-202ENST00000345392 ZNF580Q9UK33 172 aa13.26□□□□□ -0.29
VHL-202ENST00000345392 IGHV3-33P01772 117 aa13.26□□□□□ -0.29
VHL-202ENST00000345392 C19orf54Q5BKX5 351 aa13.26□□□□□ -0.29
VHL-202ENST00000345392 MUSTN1Q8IVN3 82 aa13.26□□□□□ -0.29
VHL-202ENST00000345392 FLNCQ14315 2725 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms