RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 ICOSQ9Y6W8 199 aa14.5□□□□□ -0.09
SMARCB1-202ENST00000344921 GATA1P15976 413 aaPredicted RBP14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 FAM231DQ6ZW35 169 aa14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 SFRP2Q96HF1 295 aa14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 SAMD10Q9BYL1 202 aa14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 A0A087WWL8 130 aa14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 IGLC6P0CF74 106 aa14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 CCL18P55774 89 aa14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 ADIRFQ15847 76 aa14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 ZFP2Q6ZN57 461 aa14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 ALMS1Q8TCU4 4167 aa14.49□□□□□ -0.09
SMARCB1-202ENST00000344921 A0A096LPF7 62 aa14.48□□□□□ -0.09
SMARCB1-202ENST00000344921 A0A1W2PPQ1 181 aa14.48□□□□□ -0.09
SMARCB1-202ENST00000344921 GYPEP15421 78 aa14.48□□□□□ -0.09
SMARCB1-202ENST00000344921 SMCO4Q9NRQ5 59 aa14.48□□□□□ -0.09
SMARCB1-202ENST00000344921 SACSQ9NZJ4 4579 aa14.48□□□□□ -0.09
SMARCB1-202ENST00000344921 F2Z2F3 143 aa14.47□□□□□ -0.09
SMARCB1-202ENST00000344921 RHODO00212 210 aa14.47□□□□□ -0.09
SMARCB1-202ENST00000344921 RPL23P62829 140 aaKnown RBP14.47□□□□□ -0.09
SMARCB1-202ENST00000344921 MRPL23Q16540 153 aaKnown RBP14.47□□□□□ -0.09
SMARCB1-202ENST00000344921 C15orf54Q8N8G6 183 aa14.47□□□□□ -0.09
SMARCB1-202ENST00000344921 SLC25A29Q8N8R3 303 aa14.47□□□□□ -0.09
SMARCB1-202ENST00000344921 RNF212Q495C1 297 aa14.46□□□□□ -0.09
SMARCB1-202ENST00000344921 LYZL1Q6UWQ5 148 aa14.46□□□□□ -0.09
SMARCB1-202ENST00000344921 CBLN2Q8IUK8 224 aa14.46□□□□□ -0.09
SMARCB1-202ENST00000344921 PRADC1Q9BSG0 188 aa14.46□□□□□ -0.09
SMARCB1-202ENST00000344921 TRBV6-4A0A1B0GX49 114 aa14.46□□□□□ -0.1
SMARCB1-202ENST00000344921 A8MWL6 223 aa14.46□□□□□ -0.1
SMARCB1-202ENST00000344921 K7EQD1 137 aa14.46□□□□□ -0.1
SMARCB1-202ENST00000344921 NXPH4O95158 308 aa14.46□□□□□ -0.1
SMARCB1-202ENST00000344921 SRIP30626 198 aa14.46□□□□□ -0.1
SMARCB1-202ENST00000344921 RAB5BP61020 215 aa14.45□□□□□ -0.1
SMARCB1-202ENST00000344921 CACNG7P62955 275 aa14.45□□□□□ -0.1
SMARCB1-202ENST00000344921 RHOHQ15669 191 aa14.45□□□□□ -0.1
SMARCB1-202ENST00000344921 ISOC2Q96AB3 205 aa14.45□□□□□ -0.1
SMARCB1-202ENST00000344921 OSTCQ9NRP0 149 aa14.45□□□□□ -0.1
SMARCB1-202ENST00000344921 LOC100131303A0A0U1RQF7 123 aa14.44□□□□□ -0.1
SMARCB1-202ENST00000344921 CRYGDP07320 174 aa14.44□□□□□ -0.1
SMARCB1-202ENST00000344921 SMIM17P0DL12 118 aa14.44□□□□□ -0.1
SMARCB1-202ENST00000344921 UFSP1Q6NVU6 142 aa14.44□□□□□ -0.1
SMARCB1-202ENST00000344921 Q6ZSN1 163 aa14.44□□□□□ -0.1
SMARCB1-202ENST00000344921 NEGR1Q7Z3B1 354 aa14.44□□□□□ -0.1
SMARCB1-202ENST00000344921 C14orf178Q8N769 122 aaPredicted RBP14.44□□□□□ -0.1
SMARCB1-202ENST00000344921 AP1S3Q96PC3 154 aa14.44□□□□□ -0.1
SMARCB1-202ENST00000344921 S100A8P05109 93 aa14.43□□□□□ -0.1
SMARCB1-202ENST00000344921 ESRGQ1W209 222 aa14.43□□□□□ -0.1
SMARCB1-202ENST00000344921 CT83Q5H943 113 aa14.43□□□□□ -0.1
SMARCB1-202ENST00000344921 LINC00588Q9Y4M8 146 aa14.43□□□□□ -0.1
SMARCB1-202ENST00000344921 DNAH1Q9P2D7 4330 aa14.42□□□□□ -0.1
SMARCB1-202ENST00000344921 COLCA2A8K830 154 aa14.42□□□□□ -0.1
SMARCB1-202ENST00000344921 NTF3P20783 257 aa14.42□□□□□ -0.1
SMARCB1-202ENST00000344921 GTSF1Q8WW33 167 aa14.42□□□□□ -0.1
SMARCB1-202ENST00000344921 C12orf57Q99622 126 aa14.42□□□□□ -0.1
SMARCB1-202ENST00000344921 MSRB1Q9NZV6 116 aa14.42□□□□□ -0.1
SMARCB1-202ENST00000344921 CTRLP40313 264 aa14.41□□□□□ -0.1
SMARCB1-202ENST00000344921 AKR1D1P51857 326 aa14.41□□□□□ -0.1
SMARCB1-202ENST00000344921 ZNF56Q15929 161 aa14.41□□□□□ -0.1
SMARCB1-202ENST00000344921 OR10G8Q8NGN5 311 aa14.41□□□□□ -0.1
SMARCB1-202ENST00000344921 MT-ND4LP03901 98 aa14.41□□□□□ -0.1
SMARCB1-202ENST00000344921 TWIST1Q15672 202 aa14.41□□□□□ -0.1
SMARCB1-202ENST00000344921 F5H697 171 aa14.4□□□□□ -0.1
SMARCB1-202ENST00000344921 FAM3BP58499 235 aaPredicted RBP14.4□□□□□ -0.1
SMARCB1-202ENST00000344921 TSKUQ8WUA8 353 aa14.4□□□□□ -0.1
SMARCB1-202ENST00000344921 PGLYRP4Q96LB8 373 aa14.4□□□□□ -0.1
SMARCB1-202ENST00000344921 C1orf196B1AJZ1 125 aa14.39□□□□□ -0.11
SMARCB1-202ENST00000344921 TRGC1P0CF51 173 aa14.39□□□□□ -0.11
SMARCB1-202ENST00000344921 SMIM6P0DI80 62 aa14.39□□□□□ -0.11
SMARCB1-202ENST00000344921 SH2D6Q7Z4S9 175 aa14.39□□□□□ -0.11
SMARCB1-202ENST00000344921 V9GYV3 84 aa14.39□□□□□ -0.11
SMARCB1-202ENST00000344921 HYDINQ4G0P3 5121 aa14.39□□□□□ -0.11
SMARCB1-202ENST00000344921 RYR3Q15413 4870 aa14.39□□□□□ -0.11
SMARCB1-202ENST00000344921 WDR73Q6P4I2 378 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 BORCS7Q96B45 105 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 IGLV2-18A0A075B6J9 118 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 GAGE12JA6NER3 117 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 HIGD1CA8MV81 97 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 MGPP08493 103 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 RAB4BP61018 213 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 GAGE1Q13065 139 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 GAGE4Q13068 117 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 GAGE5Q13069 117 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 RHEBQ15382 184 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 GAGE13Q4V321 117 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 LYPD5Q6UWN5 251 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 GFRA4Q9GZZ7 299 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 VPS13DQ5THJ4 4388 aa14.38□□□□□ -0.11
SMARCB1-202ENST00000344921 RYR2Q92736 4967 aa14.37□□□□□ -0.11
SMARCB1-202ENST00000344921 EVI2AP22794 236 aa14.37□□□□□ -0.11
SMARCB1-202ENST00000344921 CNFNQ9BYD5 112 aa14.37□□□□□ -0.11
SMARCB1-202ENST00000344921 KMT2AQ03164 3969 aa14.36□□□□□ -0.11
SMARCB1-202ENST00000344921 FAM231BA6NCW3 169 aa14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 PCP4L1A6NKN8 68 aa14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 M0R2N4 97 aa14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 FOXA3P55318 350 aaPredicted RBP14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 MRPS16Q9Y3D3 137 aaKnown RBP14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 C5orf52A6NGY3 159 aa14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 PNRC1Q12796 327 aaPredicted RBP14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 SMIM15Q7Z3B0 74 aa14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 ZNRF2Q8NHG8 242 aa14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 Q9UF83 564 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms