RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 FAT2Q9NYQ8 4349 aa13.18□□□□□ -0.3
CDHR4-201ENST00000343366 TRGV4A0A0C4DH28 118 aa13.17□□□□□ -0.3
CDHR4-201ENST00000343366 GZMBP10144 247 aa13.17□□□□□ -0.3
CDHR4-201ENST00000343366 CFAP126Q5VTH2 177 aa13.17□□□□□ -0.3
CDHR4-201ENST00000343366 LYZL1Q6UWQ5 148 aa13.17□□□□□ -0.3
CDHR4-201ENST00000343366 C15orf53Q8NAA6 179 aa13.17□□□□□ -0.3
CDHR4-201ENST00000343366 OR10AG1Q8NH19 301 aa13.17□□□□□ -0.3
CDHR4-201ENST00000343366 PRO0255Q9UI72 69 aa13.17□□□□□ -0.3
CDHR4-201ENST00000343366 CARHSP1Q9Y2V2 147 aaKnown RBP13.17□□□□□ -0.3
CDHR4-201ENST00000343366 TRGC1P0CF51 173 aa13.16□□□□□ -0.3
CDHR4-201ENST00000343366 ADCYAP1P18509 176 aa13.16□□□□□ -0.3
CDHR4-201ENST00000343366 AP1S3Q96PC3 154 aa13.16□□□□□ -0.3
CDHR4-201ENST00000343366 NAT8BQ9UHF3 227 aa13.16□□□□□ -0.3
CDHR4-201ENST00000343366 HIGD1CA8MV81 97 aa13.15□□□□□ -0.3
CDHR4-201ENST00000343366 IGLL5B9A064 214 aa13.15□□□□□ -0.3
CDHR4-201ENST00000343366 SMIM17P0DL12 118 aa13.15□□□□□ -0.3
CDHR4-201ENST00000343366 POM121L12Q8N7R1 296 aa13.15□□□□□ -0.3
CDHR4-201ENST00000343366 ZNF479Q96JC4 524 aa13.15□□□□□ -0.3
CDHR4-201ENST00000343366 ABCA13Q86UQ4 5058 aa13.15□□□□□ -0.3
CDHR4-201ENST00000343366 DNAH2Q9P225 4427 aa13.14□□□□□ -0.31
CDHR4-201ENST00000343366 SMIM27A0A1W2PRY6 76 aa13.14□□□□□ -0.31
CDHR4-201ENST00000343366 FHL2Q14192 279 aa13.14□□□□□ -0.31
CDHR4-201ENST00000343366 SMIM15Q7Z3B0 74 aa13.14□□□□□ -0.31
CDHR4-201ENST00000343366 GTSF1Q8WW33 167 aa13.14□□□□□ -0.31
CDHR4-201ENST00000343366 CTDSP1Q9GZU7 261 aa13.14□□□□□ -0.31
CDHR4-201ENST00000343366 HHLA3Q9XRX5 114 aa13.14□□□□□ -0.31
CDHR4-201ENST00000343366 TRBV6-4A0A1B0GX49 114 aa13.13□□□□□ -0.31
CDHR4-201ENST00000343366 IGHV3-53P01767 116 aa13.13□□□□□ -0.31
CDHR4-201ENST00000343366 NTF3P20783 257 aa13.13□□□□□ -0.31
CDHR4-201ENST00000343366 RNF212Q495C1 297 aa13.13□□□□□ -0.31
CDHR4-201ENST00000343366 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
CDHR4-201ENST00000343366 HOXA5P20719 270 aa13.12□□□□□ -0.31
CDHR4-201ENST00000343366 PGLYRP4Q96LB8 373 aa13.12□□□□□ -0.31
CDHR4-201ENST00000343366 DYNC1H1Q14204 4646 aaKnown RBP13.12□□□□□ -0.31
CDHR4-201ENST00000343366 A0A1B0GW15 77 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 PAX4O43316 350 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 GATA1P15976 413 aaPredicted RBP13.11□□□□□ -0.31
CDHR4-201ENST00000343366 CRYBA4P53673 196 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 RIGQ13278 110 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 RHEBQ15382 184 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 TWIST1Q15672 202 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 TMEM88Q6PEY1 159 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 SVBPQ8N300 66 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 IMMP2LQ96T52 175 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 PRADC1Q9BSG0 188 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 TMEM242Q9NWH2 141 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 DNAH17Q9UFH2 4485 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 NACAE9PAV3 2078 aa13.11□□□□□ -0.31
CDHR4-201ENST00000343366 TRAV26-1A0A087WT03 109 aa13.1□□□□□ -0.31
CDHR4-201ENST00000343366 CRYGDP07320 174 aa13.1□□□□□ -0.31
CDHR4-201ENST00000343366 RHOHQ15669 191 aa13.1□□□□□ -0.31
CDHR4-201ENST00000343366 FAM74A4Q5TZK3 123 aa13.1□□□□□ -0.31
CDHR4-201ENST00000343366 UFSP1Q6NVU6 142 aa13.1□□□□□ -0.31
CDHR4-201ENST00000343366 SH2D6Q7Z4S9 175 aa13.1□□□□□ -0.31
CDHR4-201ENST00000343366 A0A087WWC5 75 aa13.09□□□□□ -0.31
CDHR4-201ENST00000343366 SNAPINO95295 136 aa13.09□□□□□ -0.31
CDHR4-201ENST00000343366 RAB4BP61018 213 aa13.09□□□□□ -0.31
CDHR4-201ENST00000343366 NUP35Q8NFH5 326 aa13.09□□□□□ -0.31
CDHR4-201ENST00000343366 DPH3P1Q9H4G8 78 aa13.09□□□□□ -0.31
CDHR4-201ENST00000343366 MUC21A0A0G2JKD1 596 aa13.08□□□□□ -0.32
CDHR4-201ENST00000343366 MUC21A0A140T8X8 626 aa13.08□□□□□ -0.32
CDHR4-201ENST00000343366 S100A8P05109 93 aa13.08□□□□□ -0.32
CDHR4-201ENST00000343366 MRPL23Q16540 153 aaKnown RBP13.08□□□□□ -0.32
CDHR4-201ENST00000343366 FRZBQ92765 325 aa13.08□□□□□ -0.32
CDHR4-201ENST00000343366 JPT2Q9H910 190 aa13.08□□□□□ -0.32
CDHR4-201ENST00000343366 APLNQ9ULZ1 77 aa13.08□□□□□ -0.32
CDHR4-201ENST00000343366 ICOSQ9Y6W8 199 aa13.08□□□□□ -0.32
CDHR4-201ENST00000343366 A0A087WWL8 130 aa13.07□□□□□ -0.32
CDHR4-201ENST00000343366 APOC3P02656 99 aa13.07□□□□□ -0.32
CDHR4-201ENST00000343366 SSTP61278 116 aa13.07□□□□□ -0.32
CDHR4-201ENST00000343366 KCNIP4Q6PIL6 250 aa13.07□□□□□ -0.32
CDHR4-201ENST00000343366 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
CDHR4-201ENST00000343366 C14orf178Q8N769 122 aaPredicted RBP13.07□□□□□ -0.32
CDHR4-201ENST00000343366 CLRN3Q8NCR9 226 aa13.07□□□□□ -0.32
CDHR4-201ENST00000343366 DNAH11Q96DT5 4516 aa13.06□□□□□ -0.32
CDHR4-201ENST00000343366 TRBV10-1A0A0K0K1A3 114 aa13.06□□□□□ -0.32
CDHR4-201ENST00000343366 H7C1H1 209 aa13.06□□□□□ -0.32
CDHR4-201ENST00000343366 K7EQD1 137 aa13.06□□□□□ -0.32
CDHR4-201ENST00000343366 SLC25A29Q8N8R3 303 aa13.06□□□□□ -0.32
CDHR4-201ENST00000343366 VSIG2Q96IQ7 327 aa13.06□□□□□ -0.32
CDHR4-201ENST00000343366 SAMD10Q9BYL1 202 aa13.06□□□□□ -0.32
CDHR4-201ENST00000343366 TRAV9-1A0A075B6T8 112 aa13.05□□□□□ -0.32
CDHR4-201ENST00000343366 IGHV3-73A0A0B4J1V6 119 aa13.05□□□□□ -0.32
CDHR4-201ENST00000343366 A0A0J9YY99 117 aa13.05□□□□□ -0.32
CDHR4-201ENST00000343366 ZNF56Q15929 161 aa13.05□□□□□ -0.32
CDHR4-201ENST00000343366 LGALS9CQ6DKI2 356 aa13.05□□□□□ -0.32
CDHR4-201ENST00000343366 MSRB1Q9NZV6 116 aa13.05□□□□□ -0.32
CDHR4-201ENST00000343366 KIF25-AS1Q9Y6Z4 181 aa13.05□□□□□ -0.32
CDHR4-201ENST00000343366 C7orf77A4D0Y5 90 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 F5H697 171 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 NUDT3O95989 172 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 P0DMU3 169 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 FAM231AP0DMU4 169 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 FAM231CP0DMU5 169 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 EVI2AP22794 236 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 S100PP25815 95 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 SLC7A5P1Q8MH63 180 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 TMEM191AQ9H0A3 160 aa13.04□□□□□ -0.32
CDHR4-201ENST00000343366 PKD1P98161 4303 aa13.03□□□□□ -0.32
CDHR4-201ENST00000343366 GYPEP15421 78 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms