RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 DIRC1Q969H9 104 aa11.71□□□□□ -0.53
COL11A2-201ENST00000341947 DOCK7Q96N67 2140 aa11.71□□□□□ -0.53
COL11A2-201ENST00000341947 RPL39P62891 51 aaKnown RBP11.71□□□□□ -0.54
COL11A2-201ENST00000341947 TMEM263Q8WUH6 116 aaKnown RBP11.71□□□□□ -0.54
COL11A2-201ENST00000341947 A4D1N5 150 aa11.7□□□□□ -0.54
COL11A2-201ENST00000341947 SIRPDQ9H106 197 aa11.7□□□□□ -0.54
COL11A2-201ENST00000341947 DNAJC9-AS1A6NH13 148 aa11.7□□□□□ -0.54
COL11A2-201ENST00000341947 CCL25O15444 150 aa11.7□□□□□ -0.54
COL11A2-201ENST00000341947 TOMM6Q96B49 74 aa11.7□□□□□ -0.54
COL11A2-201ENST00000341947 RLFQ13129 1914 aa11.7□□□□□ -0.54
COL11A2-201ENST00000341947 B9D2Q9BPU9 175 aa11.7□□□□□ -0.54
COL11A2-201ENST00000341947 A0A0B4J2C4 111 aa11.7□□□□□ -0.54
COL11A2-201ENST00000341947 DAND5Q8N907 189 aa11.69□□□□□ -0.54
COL11A2-201ENST00000341947 LYPD6BQ8NI32 183 aa11.69□□□□□ -0.54
COL11A2-201ENST00000341947 C14orf177Q52M58 125 aa11.69□□□□□ -0.54
COL11A2-201ENST00000341947 BAALCQ8WXS3 180 aa11.69□□□□□ -0.54
COL11A2-201ENST00000341947 HELZP42694 1942 aaKnown RBP11.69□□□□□ -0.54
COL11A2-201ENST00000341947 CADP27708 2225 aa11.69□□□□□ -0.54
COL11A2-201ENST00000341947 PRO0255Q9UI72 69 aa11.69□□□□□ -0.54
COL11A2-201ENST00000341947 A6NDX4 124 aa11.68□□□□□ -0.54
COL11A2-201ENST00000341947 KMT2EQ8IZD2 1858 aa11.68□□□□□ -0.54
COL11A2-201ENST00000341947 C11orf45Q8TAV5 145 aa11.68□□□□□ -0.54
COL11A2-201ENST00000341947 C14orf132Q9NPU4 83 aa11.68□□□□□ -0.54
COL11A2-201ENST00000341947 PSMB8P28062 276 aa11.67□□□□□ -0.54
COL11A2-201ENST00000341947 Q6ZSR3 168 aa11.67□□□□□ -0.54
COL11A2-201ENST00000341947 NDUFA11Q86Y39 141 aa11.67□□□□□ -0.54
COL11A2-201ENST00000341947 IGLV1-47P01700 117 aa11.67□□□□□ -0.54
COL11A2-201ENST00000341947 TMEM61Q8N0U2 210 aa11.67□□□□□ -0.54
COL11A2-201ENST00000341947 PLXND1Q9Y4D7 1925 aa11.67□□□□□ -0.54
COL11A2-201ENST00000341947 DOCK8Q8NF50 2099 aa11.67□□□□□ -0.54
COL11A2-201ENST00000341947 DEFB125Q8N687 156 aa11.66□□□□□ -0.54
COL11A2-201ENST00000341947 JMJD7-PLA2G4BH0Y9G9 81 aa11.66□□□□□ -0.54
COL11A2-201ENST00000341947 MAP6D1Q9H9H5 199 aa11.66□□□□□ -0.54
COL11A2-201ENST00000341947 NCOR1O75376 2440 aa11.66□□□□□ -0.54
COL11A2-201ENST00000341947 IGKV3D-7A0A0C4DH55 119 aa11.66□□□□□ -0.54
COL11A2-201ENST00000341947 HIGD2BQ4VC39 106 aa11.66□□□□□ -0.54
COL11A2-201ENST00000341947 ZNF407Q9C0G0 2248 aa11.66□□□□□ -0.54
COL11A2-201ENST00000341947 NLRC5Q86WI3 1866 aa11.66□□□□□ -0.54
COL11A2-201ENST00000341947 PRB2P02812 416 aaPredicted RBP11.66□□□□□ -0.54
COL11A2-201ENST00000341947 C11orf86A6NJI1 115 aa11.65□□□□□ -0.54
COL11A2-201ENST00000341947 FAM167A-AS1Q96KT0 104 aa11.65□□□□□ -0.54
COL11A2-201ENST00000341947 LOXL1Q08397 574 aaPredicted RBP11.65□□□□□ -0.54
COL11A2-201ENST00000341947 LECT2O14960 151 aa11.65□□□□□ -0.54
COL11A2-201ENST00000341947 MYLKQ15746 1914 aa11.65□□□□□ -0.54
COL11A2-201ENST00000341947 PKDREJQ9NTG1 2253 aa11.65□□□□□ -0.54
COL11A2-201ENST00000341947 A0A0J9YX75 114 aa11.65□□□□□ -0.54
COL11A2-201ENST00000341947 LINC00173Q6ZV60 143 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 GTSF1Q8WW33 167 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 FBXL19-AS1Q494R0 122 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 LRRC75A-AS1Q8N1F1 130 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 PROP1O75360 226 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 TRBV12-3P01733 135 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 CTRLP40313 264 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 H0Y9J4 135 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 LINC01620Q4KN68 170 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 ANKRD39Q53RE8 183 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 DEFB1P60022 68 aa11.64□□□□□ -0.55
COL11A2-201ENST00000341947 UNQ9165/PRO28630Q6UXU0 137 aa11.63□□□□□ -0.55
COL11A2-201ENST00000341947 ODF3L1Q8IXM7 274 aa11.63□□□□□ -0.55
COL11A2-201ENST00000341947 MIR7-3HGQ8N6C7 128 aa11.63□□□□□ -0.55
COL11A2-201ENST00000341947 RNF183Q96D59 192 aa11.63□□□□□ -0.55
COL11A2-201ENST00000341947 MDFICQ9P1T7 246 aa11.63□□□□□ -0.55
COL11A2-201ENST00000341947 NUP210Q8TEM1 1887 aaPredicted RBP11.63□□□□□ -0.55
COL11A2-201ENST00000341947 LGALS9O00182 355 aa11.62□□□□□ -0.55
COL11A2-201ENST00000341947 COX7BP24311 80 aa11.62□□□□□ -0.55
COL11A2-201ENST00000341947 TRBV10-1A0A0K0K1A3 114 aa11.62□□□□□ -0.55
COL11A2-201ENST00000341947 E9PLD3 99 aa11.62□□□□□ -0.55
COL11A2-201ENST00000341947 TNFRSF13BO14836 293 aaPredicted RBP11.62□□□□□ -0.55
COL11A2-201ENST00000341947 IGHV1-58A0A0C4DH39 117 aa11.62□□□□□ -0.55
COL11A2-201ENST00000341947 ATOX1O00244 68 aa11.62□□□□□ -0.55
COL11A2-201ENST00000341947 TRBV6-1A0A0K0K1D8 114 aa11.61□□□□□ -0.55
COL11A2-201ENST00000341947 ROS1P08922 2347 aa11.61□□□□□ -0.55
COL11A2-201ENST00000341947 DOCK11Q5JSL3 2073 aa11.61□□□□□ -0.55
COL11A2-201ENST00000341947 DOCK10Q96BY6 2186 aa11.61□□□□□ -0.55
COL11A2-201ENST00000341947 NCKAP5O14513 1909 aa11.61□□□□□ -0.55
COL11A2-201ENST00000341947 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
COL11A2-201ENST00000341947 SEC61GP60059 68 aa11.61□□□□□ -0.55
COL11A2-201ENST00000341947 TMEM256-PLSCR3K7ERE1 68 aa11.61□□□□□ -0.55
COL11A2-201ENST00000341947 ABCA1O95477 2261 aa11.6□□□□□ -0.55
COL11A2-201ENST00000341947 HILS1P60008 231 aa11.6□□□□□ -0.55
COL11A2-201ENST00000341947 TRAV26-1A0A087WT03 109 aa11.6□□□□□ -0.55
COL11A2-201ENST00000341947 KIR2DL5BA0A0G2JN68 375 aa11.6□□□□□ -0.55
COL11A2-201ENST00000341947 KIR2DL5BA0A0G2JPC4 375 aa11.6□□□□□ -0.55
COL11A2-201ENST00000341947 KIR2DL5AQ8N109 375 aa11.6□□□□□ -0.55
COL11A2-201ENST00000341947 HIGD1BQ9P298 99 aa11.6□□□□□ -0.55
COL11A2-201ENST00000341947 A0A1W2PNU3 283 aaPredicted RBP11.59□□□□□ -0.55
COL11A2-201ENST00000341947 HEATR5AQ86XA9 2040 aa11.59□□□□□ -0.55
COL11A2-201ENST00000341947 PRORYQ9H606 182 aa11.59□□□□□ -0.55
COL11A2-201ENST00000341947 C20orf203Q8NBC4 194 aa11.59□□□□□ -0.55
COL11A2-201ENST00000341947 E7EUB6 86 aa11.59□□□□□ -0.55
COL11A2-201ENST00000341947 CLEC2BQ92478 149 aa11.59□□□□□ -0.55
COL11A2-201ENST00000341947 EML6Q6ZMW3 1958 aa11.58□□□□□ -0.55
COL11A2-201ENST00000341947 WFDC11Q8NEX6 87 aa11.58□□□□□ -0.56
COL11A2-201ENST00000341947 Q8NA96 180 aa11.58□□□□□ -0.56
COL11A2-201ENST00000341947 SMIM20Q8N5G0 67 aa11.58□□□□□ -0.56
COL11A2-201ENST00000341947 SPRY4Q9C004 299 aa11.58□□□□□ -0.56
COL11A2-201ENST00000341947 UFSP1Q6NVU6 142 aa11.57□□□□□ -0.56
COL11A2-201ENST00000341947 TRBV10-2A0A0K0K1G8 114 aa11.57□□□□□ -0.56
COL11A2-201ENST00000341947 LYRM9A8MSI8 78 aa11.57□□□□□ -0.56
COL11A2-201ENST00000341947 FXYD2P54710 66 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms