RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 SPRY2O43597 315 aa12.75□□□□□ -0.37
ATAD3A-201ENST00000339113 FHL3Q13643 280 aa12.75□□□□□ -0.37
ATAD3A-201ENST00000339113 ZMAT4Q9H898 229 aa12.75□□□□□ -0.37
ATAD3A-201ENST00000339113 SETXQ7Z333 2677 aaKnown RBP12.75□□□□□ -0.37
ATAD3A-201ENST00000339113 HIVEP1P15822 2718 aa12.75□□□□□ -0.37
ATAD3A-201ENST00000339113 NPYP01303 97 aa12.74□□□□□ -0.37
ATAD3A-201ENST00000339113 ANXA2RQ3ZCQ2 193 aa12.74□□□□□ -0.37
ATAD3A-201ENST00000339113 NEGR1Q7Z3B1 354 aa12.74□□□□□ -0.37
ATAD3A-201ENST00000339113 HIGD1BQ9P298 99 aa12.74□□□□□ -0.37
ATAD3A-201ENST00000339113 TSSC4Q9Y5U2 329 aaPredicted RBP12.74□□□□□ -0.37
ATAD3A-201ENST00000339113 AGRNO00468 2067 aa12.73□□□□□ -0.37
ATAD3A-201ENST00000339113 H3BVH4 76 aa12.73□□□□□ -0.37
ATAD3A-201ENST00000339113 DEFB114Q30KQ6 69 aa12.73□□□□□ -0.37
ATAD3A-201ENST00000339113 A0A1W2PPM0 123 aa12.73□□□□□ -0.37
ATAD3A-201ENST00000339113 GNRH2O43555 120 aa12.73□□□□□ -0.37
ATAD3A-201ENST00000339113 SAP30O75446 220 aa12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 PCP2Q8IVA1 136 aa12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 SMKR1H3BMG3 65 aa12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 NDUFA7O95182 113 aa12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 PROK1P58294 105 aa12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 CD300EQ496F6 205 aaPredicted RBP12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 RNF185Q96GF1 192 aa12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 MAP1LC3AQ9H492 121 aa12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 NXT2Q9NPJ8 142 aaKnown RBP12.72□□□□□ -0.37
ATAD3A-201ENST00000339113 NIPBLQ6KC79 2804 aaeCLIP12.71□□□□□ -0.37
ATAD3A-201ENST00000339113 TRAV12-2A0A075B6T6 113 aa12.71□□□□□ -0.37
ATAD3A-201ENST00000339113 TRAV12-3A0A0B4J271 114 aa12.71□□□□□ -0.37
ATAD3A-201ENST00000339113 KNCNA6PVL3 124 aa12.71□□□□□ -0.37
ATAD3A-201ENST00000339113 SMIM17P0DL12 118 aa12.71□□□□□ -0.37
ATAD3A-201ENST00000339113 FCER1GP30273 86 aa12.71□□□□□ -0.37
ATAD3A-201ENST00000339113 DEFB131AP59861 70 aa12.71□□□□□ -0.37
ATAD3A-201ENST00000339113 HHLA3Q9XRX5 114 aa12.71□□□□□ -0.37
ATAD3A-201ENST00000339113 WNK1Q9H4A3 2382 aa12.71□□□□□ -0.38
ATAD3A-201ENST00000339113 GAS8-AS1O95177 125 aa12.71□□□□□ -0.38
ATAD3A-201ENST00000339113 NMUP48645 174 aa12.71□□□□□ -0.38
ATAD3A-201ENST00000339113 DKK2Q9UBU2 259 aa12.71□□□□□ -0.38
ATAD3A-201ENST00000339113 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 EVI2AP22794 236 aa12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 FXYD7P58549 80 aa12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 ODF1Q14990 250 aa12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 FOXI2Q6ZQN5 318 aa12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 ADARB2-AS1A8MUL3 147 aa12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 HLA-DRB4P13762 266 aa12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 SPINK13Q1W4C9 94 aa12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 HLA-DRB4X5D2U9 266 aa12.7□□□□□ -0.38
ATAD3A-201ENST00000339113 FN1P02751 2386 aaKnown RBP12.69□□□□□ -0.38
ATAD3A-201ENST00000339113 SMIM13P0DJ93 91 aa12.69□□□□□ -0.38
ATAD3A-201ENST00000339113 FABP2P12104 132 aa12.69□□□□□ -0.38
ATAD3A-201ENST00000339113 KRTAP10-3P60369 221 aa12.69□□□□□ -0.38
ATAD3A-201ENST00000339113 ODF3Q96PU9 254 aa12.69□□□□□ -0.38
ATAD3A-201ENST00000339113 SPCS1Q9Y6A9 102 aa12.69□□□□□ -0.38
ATAD3A-201ENST00000339113 IGHV4-4A0A075B6R2 117 aa12.68□□□□□ -0.38
ATAD3A-201ENST00000339113 RNASE3P12724 160 aaKnown RBP12.68□□□□□ -0.38
ATAD3A-201ENST00000339113 SPANXN1Q5VSR9 72 aa12.68□□□□□ -0.38
ATAD3A-201ENST00000339113 S100A4P26447 101 aaKnown RBP12.68□□□□□ -0.38
ATAD3A-201ENST00000339113 LEPP41159 167 aa12.68□□□□□ -0.38
ATAD3A-201ENST00000339113 ASIPP42127 132 aa12.68□□□□□ -0.38
ATAD3A-201ENST00000339113 DUSP14O95147 198 aaKnown RBP12.67□□□□□ -0.38
ATAD3A-201ENST00000339113 ZNF256Q9Y2P7 627 aaPredicted RBP12.67□□□□□ -0.38
ATAD3A-201ENST00000339113 TRAV2A0A0B4J234 112 aa12.67□□□□□ -0.38
ATAD3A-201ENST00000339113 TNFRSF6BO95407 300 aa12.67□□□□□ -0.38
ATAD3A-201ENST00000339113 NSUN5P1Q3KNT7 163 aa12.67□□□□□ -0.38
ATAD3A-201ENST00000339113 SAMD5Q5TGI4 173 aa12.67□□□□□ -0.38
ATAD3A-201ENST00000339113 ATP5LO75964 103 aa12.66□□□□□ -0.38
ATAD3A-201ENST00000339113 RAB37Q96AX2 223 aa12.66□□□□□ -0.38
ATAD3A-201ENST00000339113 MAP6D1Q9H9H5 199 aa12.66□□□□□ -0.38
ATAD3A-201ENST00000339113 M0R381 172 aa12.66□□□□□ -0.38
ATAD3A-201ENST00000339113 IGKCP01834 107 aa12.66□□□□□ -0.38
ATAD3A-201ENST00000339113 GATA1P15976 413 aaPredicted RBP12.66□□□□□ -0.38
ATAD3A-201ENST00000339113 FAM159AQ6UWV7 190 aa12.66□□□□□ -0.38
ATAD3A-201ENST00000339113 TM2D2Q9BX73 214 aa12.66□□□□□ -0.38
ATAD3A-201ENST00000339113 FLNBO75369 2602 aaKnown RBP12.65□□□□□ -0.38
ATAD3A-201ENST00000339113 RBMY1BA6NDE4 496 aaKnown RBP12.65□□□□□ -0.38
ATAD3A-201ENST00000339113 RBMY1EA6NEQ0 496 aaKnown RBP12.65□□□□□ -0.38
ATAD3A-201ENST00000339113 H3BMM0 161 aa12.65□□□□□ -0.38
ATAD3A-201ENST00000339113 RBMY1DP0C7P1 496 aaKnown RBP12.65□□□□□ -0.38
ATAD3A-201ENST00000339113 IGKV2D-26A0A0A0MRZ7 120 aa12.65□□□□□ -0.39
ATAD3A-201ENST00000339113 Q8N8P6 123 aa12.65□□□□□ -0.39
ATAD3A-201ENST00000339113 NAA38Q9BRA0 125 aaKnown RBP12.65□□□□□ -0.39
ATAD3A-201ENST00000339113 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
ATAD3A-201ENST00000339113 PHLDA3Q9Y5J5 127 aa12.64□□□□□ -0.39
ATAD3A-201ENST00000339113 IGLV2-18A0A075B6J9 118 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 TMEM238C9JI98 176 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 DPM2O94777 84 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 PRSS1P07477 247 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 CD7P09564 240 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 FXYD2P54710 66 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 TCTAP57738 103 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 PHLDA1Q8WV24 401 aaPredicted RBP12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 SPAG8Q99932 426 aaPredicted RBP12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 TRAV26-2A0A0B4J265 109 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 RBMY1A1P0DJD3 496 aaKnown RBP12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 RBMY1CP0DJD4 496 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 RIPPLY3P57055 190 aa12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 RBMY1FQ15415 496 aaKnown RBP12.63□□□□□ -0.39
ATAD3A-201ENST00000339113 TRBV25-1A0A075B6N4 114 aa12.62□□□□□ -0.39
ATAD3A-201ENST00000339113 MED14OSP0DP75 135 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms