RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 Q8N1Y9 231 aa15.34■□□□□ 0.05
RUNX3-202ENST00000338888 PIEZO1Q92508 2521 aa15.34■□□□□ 0.05
RUNX3-202ENST00000338888 CCDC179H3BU77 68 aa15.34■□□□□ 0.05
RUNX3-202ENST00000338888 PPP1R17O96001 155 aa15.34■□□□□ 0.05
RUNX3-202ENST00000338888 LENEPQ9Y5L5 61 aa15.34■□□□□ 0.05
RUNX3-202ENST00000338888 TRAV2A0A0B4J234 112 aa15.33■□□□□ 0.05
RUNX3-202ENST00000338888 ELANEP08246 267 aa15.33■□□□□ 0.05
RUNX3-202ENST00000338888 TTC32Q5I0X7 151 aa15.33■□□□□ 0.05
RUNX3-202ENST00000338888 ITLN2Q8WWU7 325 aaPredicted RBP15.33■□□□□ 0.05
RUNX3-202ENST00000338888 EEF1AKMT3Q96AZ1 226 aa15.33■□□□□ 0.05
RUNX3-202ENST00000338888 LINC00477Q96M19 166 aa15.33■□□□□ 0.05
RUNX3-202ENST00000338888 U3KQE9 123 aa15.33■□□□□ 0.05
RUNX3-202ENST00000338888 RNASE3P12724 160 aaKnown RBP15.33■□□□□ 0.04
RUNX3-202ENST00000338888 OR10J6PQ8NGY7 276 aa15.33■□□□□ 0.04
RUNX3-202ENST00000338888 JPT2Q9H910 190 aa15.33■□□□□ 0.04
RUNX3-202ENST00000338888 TMEM263Q8WUH6 116 aaKnown RBP15.32■□□□□ 0.04
RUNX3-202ENST00000338888 C9orf139Q6ZV77 190 aa15.32■□□□□ 0.04
RUNX3-202ENST00000338888 GAGE12JA6NER3 117 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 GAGE7O76087 117 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 IGHV4-39P01824 125 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 GAGE12FP0CL80 117 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 GAGE12GP0CL81 117 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 GAGE12IP0CL82 117 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 GAGE4Q13068 117 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 Q1RN00 199 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 IGHV3-64A0A075B6Q5 118 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 F6UB75 175 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 MUSTN1Q8IVN3 82 aa15.31■□□□□ 0.04
RUNX3-202ENST00000338888 BEX4Q9NWD9 120 aaPredicted RBP15.31■□□□□ 0.04
RUNX3-202ENST00000338888 TEX49A0A1B0GTD5 131 aa15.3■□□□□ 0.04
RUNX3-202ENST00000338888 IFITM1P13164 125 aa15.3■□□□□ 0.04
RUNX3-202ENST00000338888 POLR2KP53803 58 aaKnown RBP15.3■□□□□ 0.04
RUNX3-202ENST00000338888 LINC00315P59091 139 aa15.3■□□□□ 0.04
RUNX3-202ENST00000338888 KLRB1Q12918 225 aa15.3■□□□□ 0.04
RUNX3-202ENST00000338888 ZNF876PQ49A33 203 aa15.3■□□□□ 0.04
RUNX3-202ENST00000338888 TMEM141Q96I45 108 aa15.3■□□□□ 0.04
RUNX3-202ENST00000338888 MUC4Q99102 2169 aa15.3■□□□□ 0.04
RUNX3-202ENST00000338888 CCL21O00585 134 aa15.3■□□□□ 0.04
RUNX3-202ENST00000338888 OPRPNQ99935 248 aaPredicted RBP15.3■□□□□ 0.04
RUNX3-202ENST00000338888 KIF25-AS1Q9Y6Z4 181 aa15.3■□□□□ 0.04
RUNX3-202ENST00000338888 OOSP1A8MZH6 123 aa15.29■□□□□ 0.04
RUNX3-202ENST00000338888 F5H697 171 aa15.29■□□□□ 0.04
RUNX3-202ENST00000338888 M0QXV9 152 aa15.29■□□□□ 0.04
RUNX3-202ENST00000338888 TIMM17AQ99595 171 aa15.29■□□□□ 0.04
RUNX3-202ENST00000338888 A0A087WWL8 130 aa15.29■□□□□ 0.04
RUNX3-202ENST00000338888 LINC01620Q4KN68 170 aa15.29■□□□□ 0.04
RUNX3-202ENST00000338888 SUMO4Q6EEV6 95 aa15.29■□□□□ 0.04
RUNX3-202ENST00000338888 TRBV7-1A0A0A6YYK4 115 aa15.28■□□□□ 0.04
RUNX3-202ENST00000338888 VCYO14598 125 aa15.28■□□□□ 0.04
RUNX3-202ENST00000338888 GRNP28799 593 aaKnown RBP15.28■□□□□ 0.04
RUNX3-202ENST00000338888 LY6DQ14210 128 aa15.28■□□□□ 0.04
RUNX3-202ENST00000338888 IGHV4OR15-8A0A075B7B6 117 aa15.28■□□□□ 0.04
RUNX3-202ENST00000338888 A0A087WW49 117 aa15.28■□□□□ 0.04
RUNX3-202ENST00000338888 MINOS1Q5TGZ0 78 aa15.28■□□□□ 0.04
RUNX3-202ENST00000338888 MINOS1-NBL1R4GNA1 71 aa15.28■□□□□ 0.04
RUNX3-202ENST00000338888 IGKV3-7A0A075B6H7 116 aa15.27■□□□□ 0.04
RUNX3-202ENST00000338888 P0DMU3 169 aa15.27■□□□□ 0.04
RUNX3-202ENST00000338888 FAM231AP0DMU4 169 aa15.27■□□□□ 0.04
RUNX3-202ENST00000338888 FAM231CP0DMU5 169 aa15.27■□□□□ 0.04
RUNX3-202ENST00000338888 MED14OSP0DP75 135 aa15.27■□□□□ 0.04
RUNX3-202ENST00000338888 ATXN8Q156A1 80 aa15.27■□□□□ 0.04
RUNX3-202ENST00000338888 ODF3Q96PU9 254 aa15.27■□□□□ 0.04
RUNX3-202ENST00000338888 TRAV8-4A0A0B4J246 113 aa15.27■□□□□ 0.03
RUNX3-202ENST00000338888 SDHAF1A6NFY7 115 aa15.27■□□□□ 0.03
RUNX3-202ENST00000338888 POM121L12Q8N7R1 296 aa15.27■□□□□ 0.03
RUNX3-202ENST00000338888 A0A0B4J2C4 111 aa15.26■□□□□ 0.03
RUNX3-202ENST00000338888 OVOL1O14753 267 aa15.26■□□□□ 0.03
RUNX3-202ENST00000338888 C1orf122Q6ZSJ8 110 aa15.26■□□□□ 0.03
RUNX3-202ENST00000338888 C15orf53Q8NAA6 179 aa15.26■□□□□ 0.03
RUNX3-202ENST00000338888 ZNF256Q9Y2P7 627 aaPredicted RBP15.26■□□□□ 0.03
RUNX3-202ENST00000338888 RPL11P62913 178 aaKnown RBP15.26■□□□□ 0.03
RUNX3-202ENST00000338888 LINC00527Q9UJ94 153 aa15.26■□□□□ 0.03
RUNX3-202ENST00000338888 ITPR1Q14643 2758 aa15.26■□□□□ 0.03
RUNX3-202ENST00000338888 KLK9Q2XQG4 91 aa15.25■□□□□ 0.03
RUNX3-202ENST00000338888 UNQ9165/PRO28630Q6UXU0 137 aa15.25■□□□□ 0.03
RUNX3-202ENST00000338888 KLK9Q9UKQ9 250 aa15.25■□□□□ 0.03
RUNX3-202ENST00000338888 TRBV7-9A0A0J9YWB2 115 aa15.25■□□□□ 0.03
RUNX3-202ENST00000338888 ZFP36P26651 326 aaKnown RBP15.25■□□□□ 0.03
RUNX3-202ENST00000338888 RPL32P62910 135 aaKnown RBP15.25■□□□□ 0.03
RUNX3-202ENST00000338888 CDSNQ15517 529 aa15.25■□□□□ 0.03
RUNX3-202ENST00000338888 LEPROTO15243 131 aa15.24■□□□□ 0.03
RUNX3-202ENST00000338888 TMEM223A0PJW6 202 aa15.24■□□□□ 0.03
RUNX3-202ENST00000338888 FAM159AQ6UWV7 190 aa15.24■□□□□ 0.03
RUNX3-202ENST00000338888 SMIM20Q8N5G0 67 aa15.24■□□□□ 0.03
RUNX3-202ENST00000338888 ZNF580Q9UK33 172 aa15.23■□□□□ 0.03
RUNX3-202ENST00000338888 ANKHD1Q8IWZ3 2542 aaKnown RBP15.23■□□□□ 0.03
RUNX3-202ENST00000338888 FAM74A4Q5TZK3 123 aa15.22■□□□□ 0.03
RUNX3-202ENST00000338888 TRBV10-2A0A0K0K1G8 114 aa15.22■□□□□ 0.03
RUNX3-202ENST00000338888 SOCS3O14543 225 aa15.22■□□□□ 0.03
RUNX3-202ENST00000338888 TRIAP1O43715 76 aa15.22■□□□□ 0.03
RUNX3-202ENST00000338888 HERV-K104P63124 156 aa15.22■□□□□ 0.03
RUNX3-202ENST00000338888 Q6Q795 121 aa15.22■□□□□ 0.03
RUNX3-202ENST00000338888 SHISA2Q6UWI4 295 aa15.22■□□□□ 0.03
RUNX3-202ENST00000338888 FAM19A4Q96LR4 140 aa15.22■□□□□ 0.03
RUNX3-202ENST00000338888 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.21■□□□□ 0.03
RUNX3-202ENST00000338888 NXPH4O95158 308 aa15.21■□□□□ 0.03
RUNX3-202ENST00000338888 ASH1LQ9NR48 2969 aaKnown RBP15.21■□□□□ 0.03
RUNX3-202ENST00000338888 H3BMM0 161 aa15.21■□□□□ 0.03
RUNX3-202ENST00000338888 TRBV12-3P01733 135 aa15.21■□□□□ 0.03
RUNX3-202ENST00000338888 RPL13AP40429 203 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms