RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
C9orf47-201ENST00000334490 TSPAN13O95857 204 aa11.5□□□□□ -0.57
C9orf47-201ENST00000334490 ATXN8Q156A1 80 aa11.5□□□□□ -0.57
C9orf47-201ENST00000334490 MRPL35Q9NZE8 188 aaKnown RBP11.5□□□□□ -0.57
C9orf47-201ENST00000334490 EBI3Q14213 229 aa11.49□□□□□ -0.57
C9orf47-201ENST00000334490 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.49□□□□□ -0.57
C9orf47-201ENST00000334490 IGKV2-29A2NJV5 120 aaPredicted RBP11.49□□□□□ -0.57
C9orf47-201ENST00000334490 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
C9orf47-201ENST00000334490 IGLC2P0DOY2 106 aa11.49□□□□□ -0.57
C9orf47-201ENST00000334490 ATP6V0E2Q8NHE4 81 aa11.49□□□□□ -0.57
C9orf47-201ENST00000334490 LY6LH3BQJ8 138 aa11.49□□□□□ -0.57
C9orf47-201ENST00000334490 XCL1P47992 114 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 CCL18P55774 89 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 DEFB125Q8N687 156 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 LURAP1LQ8IV03 231 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 ICOSQ9Y6W8 199 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 TRAV8-2A0A0B4J237 113 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 A0A0J9YX75 114 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 NDUFA12Q9UI09 145 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 PRSS29PA6NIE9 313 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 F8VRH5 84 aa11.48□□□□□ -0.57
C9orf47-201ENST00000334490 HERVK_113P63121 156 aa11.47□□□□□ -0.57
C9orf47-201ENST00000334490 MTORP42345 2549 aa11.47□□□□□ -0.57
C9orf47-201ENST00000334490 SUMO4Q6EEV6 95 aa11.47□□□□□ -0.57
C9orf47-201ENST00000334490 NKAPP1Q8N9T2 125 aa11.47□□□□□ -0.57
C9orf47-201ENST00000334490 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
C9orf47-201ENST00000334490 LAMTOR3Q9UHA4 124 aa11.47□□□□□ -0.57
C9orf47-201ENST00000334490 KRTAP10-9P60411 292 aa11.46□□□□□ -0.57
C9orf47-201ENST00000334490 MAP6D1Q9H9H5 199 aa11.46□□□□□ -0.57
C9orf47-201ENST00000334490 A0A1B0GV72 72 aa11.46□□□□□ -0.57
C9orf47-201ENST00000334490 C1orf43Q9BWL3 253 aa11.46□□□□□ -0.57
C9orf47-201ENST00000334490 K7EQD1 137 aa11.46□□□□□ -0.58
C9orf47-201ENST00000334490 C10orf99Q6UWK7 81 aa11.46□□□□□ -0.58
C9orf47-201ENST00000334490 KIAA1549Q9HCM3 1950 aa11.45□□□□□ -0.58
C9orf47-201ENST00000334490 KLF12Q9Y4X4 402 aa11.45□□□□□ -0.58
C9orf47-201ENST00000334490 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
C9orf47-201ENST00000334490 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
C9orf47-201ENST00000334490 ZNF664Q8N3J9 261 aa11.45□□□□□ -0.58
C9orf47-201ENST00000334490 C11orf1Q9H5F2 150 aa11.45□□□□□ -0.58
C9orf47-201ENST00000334490 F8WEM9 126 aa11.44□□□□□ -0.58
C9orf47-201ENST00000334490 CRYGBP07316 175 aa11.44□□□□□ -0.58
C9orf47-201ENST00000334490 DNAJC30Q96LL9 226 aa11.44□□□□□ -0.58
C9orf47-201ENST00000334490 SPINK8P0C7L1 97 aa11.44□□□□□ -0.58
C9orf47-201ENST00000334490 POLQO75417 2590 aa11.44□□□□□ -0.58
C9orf47-201ENST00000334490 Q6ZWC4 215 aa11.43□□□□□ -0.58
C9orf47-201ENST00000334490 SH2D6Q7Z4S9 175 aa11.43□□□□□ -0.58
C9orf47-201ENST00000334490 C10orf126Q8N4M7 172 aa11.43□□□□□ -0.58
C9orf47-201ENST00000334490 HHLA3Q9XRX5 114 aa11.43□□□□□ -0.58
C9orf47-201ENST00000334490 EIF4EBP1Q13541 118 aaPredicted RBP11.43□□□□□ -0.58
C9orf47-201ENST00000334490 ZNF503Q96F45 646 aa11.43□□□□□ -0.58
C9orf47-201ENST00000334490 SHISA2Q6UWI4 295 aa11.43□□□□□ -0.58
C9orf47-201ENST00000334490 C5orf38Q86SI9 138 aa11.43□□□□□ -0.58
C9orf47-201ENST00000334490 K7EMI3 77 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 KIR3DS1Q14943 382 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 IGHV3-33P01772 117 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 IGHV3-30-3P0DP02 117 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 DEFB114Q30KQ6 69 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 IGLV10-54A0A075B6I4 117 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 F8W735 103 aaPredicted RBP11.42□□□□□ -0.58
C9orf47-201ENST00000334490 LGALS9O00182 355 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 AMTNQ6UX39 209 aa11.42□□□□□ -0.58
C9orf47-201ENST00000334490 MDFICQ9P1T7 246 aa11.41□□□□□ -0.58
C9orf47-201ENST00000334490 J3QQQ9 107 aa11.41□□□□□ -0.58
C9orf47-201ENST00000334490 C20orf144Q9BQM9 153 aa11.41□□□□□ -0.58
C9orf47-201ENST00000334490 DAZ2Q13117 558 aaKnown RBP11.41□□□□□ -0.58
C9orf47-201ENST00000334490 DAZ4Q86SG3 579 aaKnown RBP11.41□□□□□ -0.58
C9orf47-201ENST00000334490 LINC01006Q8NI28 216 aa11.41□□□□□ -0.58
C9orf47-201ENST00000334490 DAZ3Q9NR90 486 aaKnown RBP11.41□□□□□ -0.58
C9orf47-201ENST00000334490 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
C9orf47-201ENST00000334490 POLR3KQ9Y2Y1 108 aaPredicted RBP11.41□□□□□ -0.58
C9orf47-201ENST00000334490 COL5A1P20908 1838 aaPredicted RBP11.41□□□□□ -0.58
C9orf47-201ENST00000334490 HIST2H2BDQ6DRA6 164 aa11.41□□□□□ -0.58
C9orf47-201ENST00000334490 SPANXA1Q9NS26 97 aa11.41□□□□□ -0.58
C9orf47-201ENST00000334490 TRAV8-3A0A0A6YYJ7 113 aa11.4□□□□□ -0.58
C9orf47-201ENST00000334490 GTSF1Q8WW33 167 aa11.4□□□□□ -0.58
C9orf47-201ENST00000334490 TANC2Q9HCD6 1990 aa11.4□□□□□ -0.58
C9orf47-201ENST00000334490 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
C9orf47-201ENST00000334490 K7EQG2 157 aa11.39□□□□□ -0.59
C9orf47-201ENST00000334490 PKD1L2Q7Z442 2459 aa11.39□□□□□ -0.59
C9orf47-201ENST00000334490 TRBV7-3A0A075B6L6 115 aa11.39□□□□□ -0.59
C9orf47-201ENST00000334490 ZNF747Q9BV97 191 aa11.39□□□□□ -0.59
C9orf47-201ENST00000334490 UTRNP46939 3433 aa11.39□□□□□ -0.59
C9orf47-201ENST00000334490 A0A1W2PPR1 153 aa11.39□□□□□ -0.59
C9orf47-201ENST00000334490 PSMG3-AS1Q96PY0 264 aa11.39□□□□□ -0.59
C9orf47-201ENST00000334490 IGLL1P15814 213 aa11.39□□□□□ -0.59
C9orf47-201ENST00000334490 AVPP01185 164 aa11.38□□□□□ -0.59
C9orf47-201ENST00000334490 HILS1P60008 231 aa11.38□□□□□ -0.59
C9orf47-201ENST00000334490 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
C9orf47-201ENST00000334490 ZNF702PQ9H963 129 aa11.38□□□□□ -0.59
C9orf47-201ENST00000334490 EDA2RQ9HAV5 297 aa11.38□□□□□ -0.59
C9orf47-201ENST00000334490 ZFP2Q6ZN57 461 aa11.38□□□□□ -0.59
C9orf47-201ENST00000334490 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
C9orf47-201ENST00000334490 OVOL2Q9BRP0 275 aa11.38□□□□□ -0.59
C9orf47-201ENST00000334490 SMR3AQ99954 134 aa11.37□□□□□ -0.59
C9orf47-201ENST00000334490 IGLL5B9A064 214 aa11.36□□□□□ -0.59
C9orf47-201ENST00000334490 MED14OSP0DP75 135 aa11.36□□□□□ -0.59
C9orf47-201ENST00000334490 Q8N6K4 173 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms