RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 STAB2Q8WWQ8 2551 aa11.92□□□□□ -0.5
SHOX-201ENST00000334060 C3orf79P0CE67 100 aa11.91□□□□□ -0.5
SHOX-201ENST00000334060 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
SHOX-201ENST00000334060 VPS25Q9BRG1 176 aa11.91□□□□□ -0.5
SHOX-201ENST00000334060 MDFICQ9P1T7 246 aa11.91□□□□□ -0.5
SHOX-201ENST00000334060 MUC21A0A0G2JKD1 596 aa11.9□□□□□ -0.5
SHOX-201ENST00000334060 TRBV7-9A0A0J9YWB2 115 aa11.9□□□□□ -0.5
SHOX-201ENST00000334060 MUC21A0A140T8X8 626 aa11.9□□□□□ -0.5
SHOX-201ENST00000334060 VAMP3Q15836 100 aa11.9□□□□□ -0.5
SHOX-201ENST00000334060 OCIAD2Q56VL3 154 aa11.9□□□□□ -0.5
SHOX-201ENST00000334060 TMEM136Q6ZRR5 245 aa11.9□□□□□ -0.5
SHOX-201ENST00000334060 OR11H2Q8NH07 326 aa11.9□□□□□ -0.5
SHOX-201ENST00000334060 RNF183Q96D59 192 aa11.9□□□□□ -0.5
SHOX-201ENST00000334060 V9GYV3 84 aa11.9□□□□□ -0.5
SHOX-201ENST00000334060 PLAC8L1A1L4L8 177 aa11.89□□□□□ -0.51
SHOX-201ENST00000334060 ORM1P02763 201 aa11.89□□□□□ -0.51
SHOX-201ENST00000334060 RCHY1Q96PM5 261 aa11.89□□□□□ -0.51
SHOX-201ENST00000334060 TRAV21A0A0B4J279 112 aa11.88□□□□□ -0.51
SHOX-201ENST00000334060 EMP1P54849 157 aa11.88□□□□□ -0.51
SHOX-201ENST00000334060 TM2D3Q9BRN9 247 aa11.88□□□□□ -0.51
SHOX-201ENST00000334060 CST9LQ9H4G1 147 aa11.88□□□□□ -0.51
SHOX-201ENST00000334060 FBLL1A6NHQ2 334 aaKnown RBP11.88□□□□□ -0.51
SHOX-201ENST00000334060 FABP5P3A8MUU1 101 aa11.88□□□□□ -0.51
SHOX-201ENST00000334060 HINT1P49773 126 aaPredicted RBP11.88□□□□□ -0.51
SHOX-201ENST00000334060 NIT1Q86X76 327 aa11.88□□□□□ -0.51
SHOX-201ENST00000334060 TIMM8BQ9Y5J9 83 aaPredicted RBP11.88□□□□□ -0.51
SHOX-201ENST00000334060 IGHV1OR15-1A0A075B7D0 117 aa11.87□□□□□ -0.51
SHOX-201ENST00000334060 APCSP02743 223 aa11.87□□□□□ -0.51
SHOX-201ENST00000334060 TSKUQ8WUA8 353 aa11.87□□□□□ -0.51
SHOX-201ENST00000334060 PMCHL2Q9BQD1 86 aa11.87□□□□□ -0.51
SHOX-201ENST00000334060 IGHV4-28A0A0C4DH34 117 aa11.87□□□□□ -0.51
SHOX-201ENST00000334060 SMIM27A0A1W2PRY6 76 aa11.87□□□□□ -0.51
SHOX-201ENST00000334060 PMCHP20382 165 aa11.87□□□□□ -0.51
SHOX-201ENST00000334060 IBA57Q5T440 356 aaKnown RBP11.87□□□□□ -0.51
SHOX-201ENST00000334060 C1QTNF4Q9BXJ3 329 aa11.87□□□□□ -0.51
SHOX-201ENST00000334060 CBY3A6NI87 242 aa11.86□□□□□ -0.51
SHOX-201ENST00000334060 Q8NAQ8 132 aa11.86□□□□□ -0.51
SHOX-201ENST00000334060 C11orf72Q8NBR9 251 aa11.86□□□□□ -0.51
SHOX-201ENST00000334060 B9D2Q9BPU9 175 aa11.86□□□□□ -0.51
SHOX-201ENST00000334060 RNASE3P12724 160 aaKnown RBP11.85□□□□□ -0.51
SHOX-201ENST00000334060 TCL1AP56279 114 aa11.85□□□□□ -0.51
SHOX-201ENST00000334060 RNF151Q2KHN1 245 aa11.85□□□□□ -0.51
SHOX-201ENST00000334060 MRPL54Q6P161 138 aaKnown RBP11.85□□□□□ -0.51
SHOX-201ENST00000334060 MUC4Q99102 2169 aa11.85□□□□□ -0.51
SHOX-201ENST00000334060 CELA1Q9UNI1 258 aa11.85□□□□□ -0.51
SHOX-201ENST00000334060 HSBP1O75506 76 aa11.85□□□□□ -0.51
SHOX-201ENST00000334060 LINC01559Q495D7 138 aa11.85□□□□□ -0.51
SHOX-201ENST00000334060 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
SHOX-201ENST00000334060 GTSF1Q8WW33 167 aa11.85□□□□□ -0.51
SHOX-201ENST00000334060 IGHV3-16A0A0C4DH30 117 aa11.84□□□□□ -0.51
SHOX-201ENST00000334060 H3BVH4 76 aa11.84□□□□□ -0.51
SHOX-201ENST00000334060 P01737 135 aa11.84□□□□□ -0.51
SHOX-201ENST00000334060 SRIP30626 198 aa11.84□□□□□ -0.51
SHOX-201ENST00000334060 ATP5L2Q7Z4Y8 100 aa11.84□□□□□ -0.51
SHOX-201ENST00000334060 SVIPQ8NHG7 77 aa11.84□□□□□ -0.51
SHOX-201ENST00000334060 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
SHOX-201ENST00000334060 TMEM189A5PLL7 270 aa11.83□□□□□ -0.52
SHOX-201ENST00000334060 FAM231DQ6ZW35 169 aa11.83□□□□□ -0.52
SHOX-201ENST00000334060 RPP21Q9H633 154 aaKnown RBP11.83□□□□□ -0.52
SHOX-201ENST00000334060 RRN3P1Q2M238 152 aa11.82□□□□□ -0.52
SHOX-201ENST00000334060 DAZAP1Q96EP5 407 aaKnown RBP11.82□□□□□ -0.52
SHOX-201ENST00000334060 TMEM70Q9BUB7 260 aa11.82□□□□□ -0.52
SHOX-201ENST00000334060 TPPP3Q9BW30 176 aa11.82□□□□□ -0.52
SHOX-201ENST00000334060 A0A0J9YWU9 116 aa11.81□□□□□ -0.52
SHOX-201ENST00000334060 SLC25A34Q6PIV7 304 aa11.81□□□□□ -0.52
SHOX-201ENST00000334060 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
SHOX-201ENST00000334060 CHCHD1Q96BP2 118 aaKnown RBP11.81□□□□□ -0.52
SHOX-201ENST00000334060 F2Z2F3 143 aa11.81□□□□□ -0.52
SHOX-201ENST00000334060 GTF2H5Q6ZYL4 71 aa11.81□□□□□ -0.52
SHOX-201ENST00000334060 SPATA25Q9BR10 227 aa11.81□□□□□ -0.52
SHOX-201ENST00000334060 TMEM191AQ9H0A3 160 aa11.81□□□□□ -0.52
SHOX-201ENST00000334060 JPT2Q9H910 190 aa11.81□□□□□ -0.52
SHOX-201ENST00000334060 NOP10Q9NPE3 64 aaKnown RBP11.81□□□□□ -0.52
SHOX-201ENST00000334060 MRPL16Q9NX20 251 aaKnown RBP11.81□□□□□ -0.52
SHOX-201ENST00000334060 TAX1BP3O14907 124 aa11.8□□□□□ -0.52
SHOX-201ENST00000334060 ARMS2P0C7Q2 107 aa11.8□□□□□ -0.52
SHOX-201ENST00000334060 SEC11AP67812 179 aa11.8□□□□□ -0.52
SHOX-201ENST00000334060 OR10AG1Q8NH19 301 aa11.8□□□□□ -0.52
SHOX-201ENST00000334060 IL17DQ8TAD2 202 aa11.8□□□□□ -0.52
SHOX-201ENST00000334060 TMEM238C9JI98 176 aa11.79□□□□□ -0.52
SHOX-201ENST00000334060 SPINK4O60575 86 aa11.79□□□□□ -0.52
SHOX-201ENST00000334060 Q6ZTI0 123 aa11.79□□□□□ -0.52
SHOX-201ENST00000334060 MSRB1Q9NZV6 116 aa11.79□□□□□ -0.52
SHOX-201ENST00000334060 SCGB1A1P11684 91 aa11.79□□□□□ -0.52
SHOX-201ENST00000334060 TMEM263Q8WUH6 116 aaKnown RBP11.79□□□□□ -0.52
SHOX-201ENST00000334060 CSMD3Q7Z407 3707 aa11.78□□□□□ -0.52
SHOX-201ENST00000334060 IGLC6P0CF74 106 aa11.78□□□□□ -0.52
SHOX-201ENST00000334060 NTF3P20783 257 aa11.78□□□□□ -0.52
SHOX-201ENST00000334060 BVES-AS1Q5T3Y7 98 aa11.78□□□□□ -0.52
SHOX-201ENST00000334060 C9orf85Q96MD7 179 aa11.78□□□□□ -0.52
SHOX-201ENST00000334060 LINC00467Q9BRT7 94 aa11.78□□□□□ -0.52
SHOX-201ENST00000334060 TP53TG1Q9Y2A0 90 aa11.78□□□□□ -0.52
SHOX-201ENST00000334060 FAM222AQ5U5X8 452 aa11.78□□□□□ -0.52
SHOX-201ENST00000334060 PGLYRP4Q96LB8 373 aa11.78□□□□□ -0.52
SHOX-201ENST00000334060 GAGE12BA1L429 117 aa11.77□□□□□ -0.53
SHOX-201ENST00000334060 ASIPP42127 132 aa11.77□□□□□ -0.53
SHOX-201ENST00000334060 LYZL1Q6UWQ5 148 aa11.77□□□□□ -0.53
SHOX-201ENST00000334060 SMIM17P0DL12 118 aa11.76□□□□□ -0.53
SHOX-201ENST00000334060 FOXA3P55318 350 aaPredicted RBP11.76□□□□□ -0.53
SHOX-201ENST00000334060 HIGD1CA8MV81 97 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms