RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TPSG1Q9NRR2 321 aa9.04□□□□□ -0.96
SHMT2-201ENST00000328923 TRBV19A0A075B6N1 114 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 H3BT86 120 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 J3QQQ9 107 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 LINC00643Q86TS7 51 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 NRACQ8N912 160 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 MBD3L2Q8NHZ7 208 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-201ENST00000328923 SPANXDQ9BXN6 97 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 PIEZO2Q9H5I5 2752 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 IGLV3-9A0A075B6K5 115 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 TRGV3P03979 118 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 ZNF80P51504 273 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-201ENST00000328923 COX8CQ7Z4L0 72 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 C5orf38Q86SI9 138 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 V9GYY9 64 aa9.03□□□□□ -0.96
SHMT2-201ENST00000328923 FLNBO75369 2602 aaKnown RBP9.03□□□□□ -0.96
SHMT2-201ENST00000328923 A0A0B4J2C4 111 aa9.02□□□□□ -0.96
SHMT2-201ENST00000328923 MRGPRG-AS1Q2M3A8 158 aa9.02□□□□□ -0.96
SHMT2-201ENST00000328923 FAM201AQ5SY85 155 aa9.02□□□□□ -0.96
SHMT2-201ENST00000328923 FAM216BQ8N7L0 139 aa9.02□□□□□ -0.96
SHMT2-201ENST00000328923 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.96
SHMT2-201ENST00000328923 SLC25A15Q9Y619 301 aa9.02□□□□□ -0.96
SHMT2-201ENST00000328923 SPRY3O43610 288 aa9.02□□□□□ -0.97
SHMT2-201ENST00000328923 CLEC2BQ92478 149 aa9.02□□□□□ -0.97
SHMT2-201ENST00000328923 BBC3Q96PG8 261 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-201ENST00000328923 CCL13Q99616 98 aa9.02□□□□□ -0.97
SHMT2-201ENST00000328923 DPH3P1Q9H4G8 78 aa9.02□□□□□ -0.97
SHMT2-201ENST00000328923 FAM236DA0A1B0GTK5 79 aa9.01□□□□□ -0.97
SHMT2-201ENST00000328923 C11orf86A6NJI1 115 aa9.01□□□□□ -0.97
SHMT2-201ENST00000328923 ATOX1O00244 68 aa9.01□□□□□ -0.97
SHMT2-201ENST00000328923 FAM236CP0DP71 79 aa9.01□□□□□ -0.97
SHMT2-201ENST00000328923 CFAP46Q8IYW2 2715 aa9.01□□□□□ -0.97
SHMT2-201ENST00000328923 HCP5Q6MZN7 132 aa9.01□□□□□ -0.97
SHMT2-201ENST00000328923 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
SHMT2-201ENST00000328923 AGPAT4-IT1Q9H0P7 198 aa9.01□□□□□ -0.97
SHMT2-201ENST00000328923 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 LY6LH3BQJ8 138 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 RPL27AP46776 148 aaKnown RBP9□□□□□ -0.97
SHMT2-201ENST00000328923 HIST1H4AP62805 103 aaKnown RBP9□□□□□ -0.97
SHMT2-201ENST00000328923 SEM1Q6ZVN7 128 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 MUSTN1Q8IVN3 82 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 Q8TAT8 98 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 ICE1Q9Y2F5 2266 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
SHMT2-201ENST00000328923 TRBV7-1A0A0A6YYK4 115 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
SHMT2-201ENST00000328923 PDE6HQ13956 83 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 PLGLAQ15195 96 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 TOMM6Q96B49 74 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 CADP27708 2225 aa9□□□□□ -0.97
SHMT2-201ENST00000328923 SVEP1Q4LDE5 3571 aa8.99□□□□□ -0.97
SHMT2-201ENST00000328923 H3BRN7 92 aa8.99□□□□□ -0.97
SHMT2-201ENST00000328923 ACYP1P07311 99 aa8.99□□□□□ -0.97
SHMT2-201ENST00000328923 APELAP0DMC3 54 aa8.99□□□□□ -0.97
SHMT2-201ENST00000328923 RHOHQ15669 191 aa8.99□□□□□ -0.97
SHMT2-201ENST00000328923 AMELXQ99217 191 aa8.99□□□□□ -0.97
SHMT2-201ENST00000328923 CNFNQ9BYD5 112 aa8.99□□□□□ -0.97
SHMT2-201ENST00000328923 TMEM223A0PJW6 202 aa8.99□□□□□ -0.97
SHMT2-201ENST00000328923 CD40P25942 277 aa8.98□□□□□ -0.97
SHMT2-201ENST00000328923 CXCL5P42830 114 aa8.98□□□□□ -0.97
SHMT2-201ENST00000328923 ERCC8Q13216 396 aa8.98□□□□□ -0.97
SHMT2-201ENST00000328923 DEFB108BQ8NET1 73 aa8.98□□□□□ -0.97
SHMT2-201ENST00000328923 ZNF462Q96JM2 2506 aa8.98□□□□□ -0.97
SHMT2-201ENST00000328923 IGHV1-46P01743 117 aa8.98□□□□□ -0.97
SHMT2-201ENST00000328923 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
SHMT2-201ENST00000328923 PSMG3-AS1Q96PY0 264 aa8.98□□□□□ -0.97
SHMT2-201ENST00000328923 ASH1LQ9NR48 2969 aaKnown RBP8.98□□□□□ -0.97
SHMT2-201ENST00000328923 IGLV4-69A0A075B6H9 119 aa8.97□□□□□ -0.97
SHMT2-201ENST00000328923 UBE2E1P51965 193 aa8.97□□□□□ -0.97
SHMT2-201ENST00000328923 FAM215AQ9Y5M1 114 aa8.97□□□□□ -0.97
SHMT2-201ENST00000328923 ICOSQ9Y6W8 199 aa8.97□□□□□ -0.97
SHMT2-201ENST00000328923 TRAV8-3A0A0A6YYJ7 113 aa8.97□□□□□ -0.97
SHMT2-201ENST00000328923 PRB1P04280 392 aa8.97□□□□□ -0.97
SHMT2-201ENST00000328923 SMIM2Q9BVW6 85 aa8.97□□□□□ -0.97
SHMT2-201ENST00000328923 ROS1P08922 2347 aa8.96□□□□□ -0.97
SHMT2-201ENST00000328923 I3L2K1 104 aa8.96□□□□□ -0.97
SHMT2-201ENST00000328923 CCL3L1P16619 93 aa8.96□□□□□ -0.97
SHMT2-201ENST00000328923 PEMTQ9UBM1 199 aa8.96□□□□□ -0.97
SHMT2-201ENST00000328923 TACC2O95359 2948 aa8.96□□□□□ -0.97
SHMT2-201ENST00000328923 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.97
SHMT2-201ENST00000328923 AVPP01185 164 aa8.96□□□□□ -0.98
SHMT2-201ENST00000328923 IGKV1-17P01599 117 aa8.96□□□□□ -0.98
SHMT2-201ENST00000328923 TMEM200BQ69YZ2 307 aa8.96□□□□□ -0.98
SHMT2-201ENST00000328923 C2orf66Q6UXQ4 117 aa8.96□□□□□ -0.98
SHMT2-201ENST00000328923 WFDC11Q8NEX6 87 aa8.96□□□□□ -0.98
SHMT2-201ENST00000328923 TENM4Q6N022 2769 aa8.96□□□□□ -0.98
SHMT2-201ENST00000328923 A0A0U1RQV1 116 aa8.95□□□□□ -0.98
SHMT2-201ENST00000328923 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
SHMT2-201ENST00000328923 M0R1B8 84 aa8.95□□□□□ -0.98
SHMT2-201ENST00000328923 RPL18AQ02543 176 aaKnown RBP8.95□□□□□ -0.98
SHMT2-201ENST00000328923 Q6ZSV7 163 aa8.95□□□□□ -0.98
SHMT2-201ENST00000328923 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-201ENST00000328923 KLRB1Q12918 225 aa8.95□□□□□ -0.98
SHMT2-201ENST00000328923 SERP2Q8N6R1 65 aa8.95□□□□□ -0.98
SHMT2-201ENST00000328923 COL6A6A6NMZ7 2263 aa8.95□□□□□ -0.98
SHMT2-201ENST00000328923 LST1O00453 97 aa8.94□□□□□ -0.98
SHMT2-201ENST00000328923 LGALS3P17931 250 aaKnown RBP8.94□□□□□ -0.98
SHMT2-201ENST00000328923 CCL8P80075 99 aa8.94□□□□□ -0.98
SHMT2-201ENST00000328923 ORMDL2Q53FV1 153 aa8.94□□□□□ -0.98
SHMT2-201ENST00000328923 C1orf195Q5TG92 126 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms