RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 LMO4P61968 165 aa10.99□□□□□ -0.65
SSBP3-201ENST00000326956 RPL32P62910 135 aaKnown RBP10.99□□□□□ -0.65
SSBP3-201ENST00000326956 USMG5Q96IX5 58 aa10.99□□□□□ -0.65
SSBP3-201ENST00000326956 TIMM17AQ99595 171 aa10.99□□□□□ -0.65
SSBP3-201ENST00000326956 TRBV7-9A0A0J9YWB2 115 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 TCL1BO95988 128 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 POLR2KP53803 58 aaKnown RBP10.98□□□□□ -0.65
SSBP3-201ENST00000326956 LY6EQ16553 131 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 PRO1854Q9UHT4 67 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 MUC6Q6W4X9 2439 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 J3QQQ9 107 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 ID1P41134 155 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 KLRB1Q12918 225 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 C10orf126Q8N4M7 172 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 CRYBA4P53673 196 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 BRD3OSQ6XYD6 125 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 Q6ZS46 218 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 SLC25A29Q8N8R3 303 aa10.98□□□□□ -0.65
SSBP3-201ENST00000326956 GEMIN7Q9H840 131 aaKnown RBP10.98□□□□□ -0.65
SSBP3-201ENST00000326956 IGHV3-30P01768 117 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 CFC1P0CG37 223 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 IGHV3-30-5P0DP03 117 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 FAM19A4Q96LR4 140 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 CDIP1Q9H305 208 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 TRAV12-3A0A0B4J271 114 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 A0A1W2PPR1 153 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 SPTAN1Q13813 2472 aaKnown RBP10.97□□□□□ -0.65
SSBP3-201ENST00000326956 ZNF56Q15929 161 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 MUC4Q99102 2169 aa10.97□□□□□ -0.65
SSBP3-201ENST00000326956 NXPH4O95158 308 aa10.96□□□□□ -0.65
SSBP3-201ENST00000326956 LINC00315P59091 139 aa10.96□□□□□ -0.65
SSBP3-201ENST00000326956 APRG1Q8IVJ8 170 aa10.96□□□□□ -0.65
SSBP3-201ENST00000326956 POM121L12Q8N7R1 296 aa10.96□□□□□ -0.65
SSBP3-201ENST00000326956 MT-ATP8P03928 68 aa10.96□□□□□ -0.66
SSBP3-201ENST00000326956 ATRXP46100 2492 aa10.96□□□□□ -0.66
SSBP3-201ENST00000326956 TSPEAR-AS2P59090 65 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 C19orf54Q5BKX5 351 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 Q6ZUT4 128 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 RAX2Q96IS3 184 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 DAZ1Q9NQZ3 744 aaKnown RBP10.95□□□□□ -0.66
SSBP3-201ENST00000326956 H7C2G1 150 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 CRIP2P52943 208 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-201ENST00000326956 Q5PR19 223 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 IGHV1-69P01742 117 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 Q1RN00 199 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 ZNF876PQ49A33 203 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 ZNRF2Q8NHG8 242 aa10.95□□□□□ -0.66
SSBP3-201ENST00000326956 ZNF688P0C7X2 276 aa10.94□□□□□ -0.66
SSBP3-201ENST00000326956 NBL1P41271 181 aa10.94□□□□□ -0.66
SSBP3-201ENST00000326956 TRAV2A0A0B4J234 112 aa10.94□□□□□ -0.66
SSBP3-201ENST00000326956 KLLNB2CW77 178 aa10.94□□□□□ -0.66
SSBP3-201ENST00000326956 CARD19Q96LW7 228 aa10.94□□□□□ -0.66
SSBP3-201ENST00000326956 H3BUA1 57 aa10.93□□□□□ -0.66
SSBP3-201ENST00000326956 ERG28Q9UKR5 140 aa10.93□□□□□ -0.66
SSBP3-201ENST00000326956 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
SSBP3-201ENST00000326956 TRBV27A0A0K0K1C4 114 aa10.93□□□□□ -0.66
SSBP3-201ENST00000326956 A4D1N5 150 aa10.93□□□□□ -0.66
SSBP3-201ENST00000326956 TMEM262E9PQX1 116 aa10.93□□□□□ -0.66
SSBP3-201ENST00000326956 XGP55808 180 aa10.93□□□□□ -0.66
SSBP3-201ENST00000326956 ANKRD29Q8N6D5 301 aa10.93□□□□□ -0.66
SSBP3-201ENST00000326956 TRAV26-1A0A087WT03 109 aa10.92□□□□□ -0.66
SSBP3-201ENST00000326956 C9JAW5 83 aa10.92□□□□□ -0.66
SSBP3-201ENST00000326956 IGKV3-20P01619 116 aa10.92□□□□□ -0.66
SSBP3-201ENST00000326956 HRNRQ86YZ3 2850 aaPredicted RBP10.92□□□□□ -0.66
SSBP3-201ENST00000326956 LGALS9O00182 355 aa10.91□□□□□ -0.66
SSBP3-201ENST00000326956 LEPROTO15243 131 aa10.91□□□□□ -0.66
SSBP3-201ENST00000326956 SLC25A20O43772 301 aa10.91□□□□□ -0.66
SSBP3-201ENST00000326956 OPRPNQ99935 248 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-201ENST00000326956 TRBV6-5A0A0K0K1A5 114 aa10.91□□□□□ -0.66
SSBP3-201ENST00000326956 H3BUX3 64 aa10.91□□□□□ -0.66
SSBP3-201ENST00000326956 IGHG2P01859 326 aa10.91□□□□□ -0.66
SSBP3-201ENST00000326956 FHL3Q13643 280 aa10.91□□□□□ -0.66
SSBP3-201ENST00000326956 RHOHQ15669 191 aa10.91□□□□□ -0.66
SSBP3-201ENST00000326956 TRPT1Q86TN4 253 aaKnown RBP10.9□□□□□ -0.66
SSBP3-201ENST00000326956 IGF2RP11717 2491 aa10.9□□□□□ -0.66
SSBP3-201ENST00000326956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.89□□□□□ -0.671e-8■■■■■ 26.8
SSBP3-201ENST00000326956 SBSPONQ8IVN8 264 aa10.89□□□□□ -0.67
SSBP3-201ENST00000326956 RELNP78509 3460 aa10.89□□□□□ -0.67
SSBP3-201ENST00000326956 TRAV12-2A0A075B6T6 113 aa10.89□□□□□ -0.67
SSBP3-201ENST00000326956 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.89□□□□□ -0.67
SSBP3-201ENST00000326956 UCNP55089 124 aa10.89□□□□□ -0.67
SSBP3-201ENST00000326956 BLCAPP62952 87 aa10.89□□□□□ -0.67
SSBP3-201ENST00000326956 MDFICQ9P1T7 246 aa10.89□□□□□ -0.67
SSBP3-201ENST00000326956 TMEM223A0PJW6 202 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 IGHV3-33P01772 117 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 MUSTN1Q8IVN3 82 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 HIVEP3Q5T1R4 2406 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 AMELXQ99217 191 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 IGHV3-16A0A0C4DH30 117 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 M0QY20 66 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 SNRPD3P62318 126 aaKnown RBP10.88□□□□□ -0.67
SSBP3-201ENST00000326956 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 ZFAND6Q6FIF0 208 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 TEX29Q8N6K0 151 aa10.88□□□□□ -0.67
SSBP3-201ENST00000326956 BEX4Q9NWD9 120 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-201ENST00000326956 RHODO00212 210 aa10.87□□□□□ -0.67
SSBP3-201ENST00000326956 A0A0J9YXV3 536 aa10.87□□□□□ -0.67
SSBP3-201ENST00000326956 I3L3M4 83 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms