RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 LY6G6EA0A0G2JKS1 128 aa11.27□□□□□ -0.61
NUP98-201ENST00000324932 TEX22C9J3V5 150 aa11.27□□□□□ -0.61
NUP98-201ENST00000324932 SEC61GP60059 68 aa11.27□□□□□ -0.61
NUP98-201ENST00000324932 U3KQA8 63 aa11.27□□□□□ -0.61
NUP98-201ENST00000324932 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
NUP98-201ENST00000324932 MIAQ16674 131 aa11.26□□□□□ -0.61
NUP98-201ENST00000324932 C19orf71A6NCJ1 209 aa11.26□□□□□ -0.61
NUP98-201ENST00000324932 IGHV3-30-3P0DP02 117 aa11.26□□□□□ -0.61
NUP98-201ENST00000324932 SPAG11BQ08648 103 aa11.26□□□□□ -0.61
NUP98-201ENST00000324932 LYPD6Q86Y78 171 aa11.26□□□□□ -0.61
NUP98-201ENST00000324932 K7EMT4 169 aa11.26□□□□□ -0.61
NUP98-201ENST00000324932 IGHV3-30P01768 117 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 IGHV3-33P01772 117 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 IGHV3-30-5P0DP03 117 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 PRSS33Q8NF86 280 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 CCL18P55774 89 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 UPK3BQ9BT76 320 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 DOCK3Q8IZD9 2030 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 KRTAP27-1Q3LI81 207 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 UBE2AP49459 152 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 FAM236DA0A1B0GTK5 79 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 FAM236CP0DP71 79 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 ATP5EP2Q5VTU8 51 aa11.25□□□□□ -0.61
NUP98-201ENST00000324932 SLURP1P55000 103 aa11.24□□□□□ -0.61
NUP98-201ENST00000324932 C20orf197Q8N268 126 aa11.24□□□□□ -0.61
NUP98-201ENST00000324932 FER1L5A0AVI2 2057 aa11.24□□□□□ -0.61
NUP98-201ENST00000324932 HIST2H2BDQ6DRA6 164 aa11.24□□□□□ -0.61
NUP98-201ENST00000324932 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
NUP98-201ENST00000324932 TRAV23DV6A0A075B6W5 121 aa11.24□□□□□ -0.61
NUP98-201ENST00000324932 C9orf66Q5T8R8 295 aa11.24□□□□□ -0.61
NUP98-201ENST00000324932 SPTSSBQ8NFR3 76 aa11.24□□□□□ -0.61
NUP98-201ENST00000324932 BPY2O14599 106 aa11.23□□□□□ -0.61
NUP98-201ENST00000324932 MT-ATP8P03928 68 aa11.23□□□□□ -0.61
NUP98-201ENST00000324932 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
NUP98-201ENST00000324932 COX7BP24311 80 aa11.23□□□□□ -0.61
NUP98-201ENST00000324932 CASP8AP2Q9UKL3 1982 aa11.23□□□□□ -0.61
NUP98-201ENST00000324932 FAM240AA0A1B0GVK7 77 aa11.23□□□□□ -0.61
NUP98-201ENST00000324932 A0A1B0GXF2 115 aa11.23□□□□□ -0.61
NUP98-201ENST00000324932 COL6A6A6NMZ7 2263 aa11.23□□□□□ -0.61
NUP98-201ENST00000324932 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
NUP98-201ENST00000324932 NFE4Q86UQ8 179 aa11.22□□□□□ -0.61
NUP98-201ENST00000324932 SEM1Q6ZVN7 128 aa11.21□□□□□ -0.61
NUP98-201ENST00000324932 Q8N9W7 124 aa11.21□□□□□ -0.61
NUP98-201ENST00000324932 MDFICQ9P1T7 246 aa11.21□□□□□ -0.61
NUP98-201ENST00000324932 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.61
NUP98-201ENST00000324932 SIPA1L1O43166 1804 aa11.21□□□□□ -0.61
NUP98-201ENST00000324932 PTPRDP23468 1912 aa11.21□□□□□ -0.61
NUP98-201ENST00000324932 RITA1Q96K30 269 aa11.21□□□□□ -0.61
NUP98-201ENST00000324932 TRBV10-1A0A0K0K1A3 114 aa11.21□□□□□ -0.61
NUP98-201ENST00000324932 SPANXB1Q9NS25 103 aaPredicted RBP11.21□□□□□ -0.62
NUP98-201ENST00000324932 A0A0J9YXY3 114 aa11.2□□□□□ -0.62
NUP98-201ENST00000324932 IGLC6P0CF74 106 aa11.2□□□□□ -0.62
NUP98-201ENST00000324932 TM2D2Q9BX73 214 aa11.2□□□□□ -0.62
NUP98-201ENST00000324932 H0Y9J4 135 aa11.2□□□□□ -0.62
NUP98-201ENST00000324932 C3orf22Q8N5N4 141 aa11.2□□□□□ -0.62
NUP98-201ENST00000324932 GPHB5Q86YW7 130 aa11.19□□□□□ -0.62
NUP98-201ENST00000324932 RIF1Q5UIP0 2472 aaKnown RBP11.19□□□□□ -0.62
NUP98-201ENST00000324932 RNF138Q8WVD3 245 aa11.19□□□□□ -0.62
NUP98-201ENST00000324932 YLPM1P49750 1951 aaKnown RBP11.19□□□□□ -0.62
NUP98-201ENST00000324932 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
NUP98-201ENST00000324932 BLCAPP62952 87 aa11.19□□□□□ -0.62
NUP98-201ENST00000324932 ATRXP46100 2492 aa11.19□□□□□ -0.62
NUP98-201ENST00000324932 TMEM89A2RUT3 159 aa11.19□□□□□ -0.62
NUP98-201ENST00000324932 C5orf56Q8N8D9 126 aa11.19□□□□□ -0.62
NUP98-201ENST00000324932 C11orf1Q9H5F2 150 aa11.18□□□□□ -0.62
NUP98-201ENST00000324932 LOXL1Q08397 574 aaPredicted RBP11.18□□□□□ -0.62
NUP98-201ENST00000324932 SPRNQ5BIV9 151 aa11.18□□□□□ -0.62
NUP98-201ENST00000324932 SBF2Q86WG5 1849 aa11.18□□□□□ -0.62
NUP98-201ENST00000324932 MALRD1Q5VYJ5 2156 aa11.18□□□□□ -0.62
NUP98-201ENST00000324932 TEX49A0A1B0GTD5 131 aa11.17□□□□□ -0.62
NUP98-201ENST00000324932 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.17□□□□□ -0.626e-7■■■■■ 28.7
NUP98-201ENST00000324932 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
NUP98-201ENST00000324932 GPR179Q6PRD1 2367 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 A0A087WW49 117 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 IGLV1-47P01700 117 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 IGHV4-38-2P0DP08 117 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 MPLKIPQ8TAP9 179 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 IGHV4-61A0A0C4DH41 118 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 C4orf48Q5BLP8 95 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 UFSP1Q6NVU6 142 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 THADAQ6YHU6 1953 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 KLK12Q9UKR0 248 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 DOCK7Q96N67 2140 aa11.16□□□□□ -0.62
NUP98-201ENST00000324932 A0A0J9YX75 114 aa11.15□□□□□ -0.62
NUP98-201ENST00000324932 IGKV4-1P06312 121 aa11.15□□□□□ -0.62
NUP98-201ENST00000324932 ESM1Q9NQ30 184 aa11.15□□□□□ -0.62
NUP98-201ENST00000324932 V9GYY9 64 aa11.15□□□□□ -0.63
NUP98-201ENST00000324932 DOCK8Q8NF50 2099 aa11.14□□□□□ -0.63
NUP98-201ENST00000324932 IGLV2-14P01704 120 aa11.14□□□□□ -0.63
NUP98-201ENST00000324932 PRO0255Q9UI72 69 aa11.14□□□□□ -0.63
NUP98-201ENST00000324932 HEATR5AQ86XA9 2040 aa11.14□□□□□ -0.63
NUP98-201ENST00000324932 USP17L23D6RBM5 183 aa11.14□□□□□ -0.63
NUP98-201ENST00000324932 ATP5EP56381 51 aaPredicted RBP11.14□□□□□ -0.63
NUP98-201ENST00000324932 IGLV2-8P01709 118 aa11.14□□□□□ -0.63
NUP98-201ENST00000324932 TMEM263Q8WUH6 116 aaKnown RBP11.14□□□□□ -0.63
NUP98-201ENST00000324932 NEXN-AS1Q8NBZ9 246 aa11.13□□□□□ -0.63
NUP98-201ENST00000324932 ODF3L1Q8IXM7 274 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms