RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 DEFB104AQ8WTQ1 72 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 CHD6Q8TD26 2715 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 CRLF1O75462 422 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 VWCEQ96DN2 955 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 C20orf173Q96LM9 149 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 PATE3B3GLJ2 98 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 ZNF883P0CG24 379 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 GDF5OSQ5U4N7 250 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 ATP5EP2Q5VTU8 51 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 DYNAPQ8N1N2 210 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 C6orf226Q5I0X4 101 aa5.54□□□□□ -1.52
SMC1A-201ENST00000322213 HELZ2Q9BYK8 2649 aaKnown RBP5.53□□□□□ -1.52
SMC1A-201ENST00000322213 IGHG3P01860 377 aa5.53□□□□□ -1.52
SMC1A-201ENST00000322213 HOXD3P31249 432 aaPredicted RBP5.53□□□□□ -1.52
SMC1A-201ENST00000322213 Q8N1Y9 231 aa5.53□□□□□ -1.52
SMC1A-201ENST00000322213 CD59P13987 128 aa5.53□□□□□ -1.52
SMC1A-201ENST00000322213 IGFL4Q6B9Z1 124 aa5.53□□□□□ -1.52
SMC1A-201ENST00000322213 SS18Q15532 418 aa5.53□□□□□ -1.52
SMC1A-201ENST00000322213 INS-IGF2F8WCM5 200 aa5.53□□□□□ -1.52
SMC1A-201ENST00000322213 RPL39LQ96EH5 51 aaKnown RBP5.53□□□□□ -1.52
SMC1A-201ENST00000322213 SUMO4Q6EEV6 95 aa5.53□□□□□ -1.52
SMC1A-201ENST00000322213 DEFB124Q8NES8 71 aa5.53□□□□□ -1.52
SMC1A-201ENST00000322213 ZNF503Q96F45 646 aa5.53□□□□□ -1.52
SMC1A-201ENST00000322213 TRGV4A0A0C4DH28 118 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 H0YGX0 51 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 DKK1O94907 266 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 PSMB8P28062 276 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 MUSTN1Q8IVN3 82 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 TACC2O95359 2948 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 LINC01619G3V211 115 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 ZNF295-AS1Q8N0V1 137 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 FAM27E3Q08E93 113 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 PKIGQ9Y2B9 76 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 TEX15Q9BXT5 2789 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 IGHV3-11P01762 117 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 HAMPP81172 84 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 LY6DQ14210 128 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 IGHV1-69P01742 117 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 SLC25A29Q8N8R3 303 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 KLHL30-AS1Q8NEE0 82 aa5.52□□□□□ -1.53
SMC1A-201ENST00000322213 Q0VFX4 171 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 CLEC2BQ92478 149 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 TIMM17AQ99595 171 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 TRGV1A0A0A0MS02 117 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 TINCRA0A1B0GVN0 87 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 LHBP01229 141 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 Q9H8V8 135 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 ZNRD1Q9P1U0 126 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 IGKV1OR2-108A0A075B7D4 117 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 IGKV3D-7A0A0C4DH55 119 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 IGLV2-8P01709 118 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 RNASE6Q93091 150 aaKnown RBP5.51□□□□□ -1.53
SMC1A-201ENST00000322213 NDUFC1O43677 76 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 ODF3L1Q8IXM7 274 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 ATRQ13535 2644 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 RS1O15537 224 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 MIAQ16674 131 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 TPSG1Q9NRR2 321 aa5.51□□□□□ -1.53
SMC1A-201ENST00000322213 IGLC6P0CF74 106 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 CXCL5P42830 114 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 ZFP2Q6ZN57 461 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 MRPL55Q7Z7F7 128 aaKnown RBP5.5□□□□□ -1.53
SMC1A-201ENST00000322213 PPDPFQ9H3Y8 114 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 FAM236DA0A1B0GTK5 79 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 FAM236CP0DP71 79 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 ZNF491Q8N8L2 437 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 RNF114Q9Y508 228 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 INSL3P51460 131 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 FANCD2OSQ96PS1 177 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 FOXE3Q13461 319 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 C17orf77Q96MU5 243 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 TMEM256-PLSCR3K7ERE1 68 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 ATP1A1-AS1Q5TC04 95 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 JMJD7-PLA2G4BH0Y9G9 81 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 C1orf195Q5TG92 126 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 MDS2Q8NDY4 140 aa5.5□□□□□ -1.53
SMC1A-201ENST00000322213 FAM110DQ8TAY7 271 aaPredicted RBP5.5□□□□□ -1.53
SMC1A-201ENST00000322213 NBEAL1Q6ZS30 2694 aa5.49□□□□□ -1.53
SMC1A-201ENST00000322213 EPOPA6NHQ4 379 aa5.49□□□□□ -1.53
SMC1A-201ENST00000322213 NDUFC2-KCTD14E9PQ53 114 aa5.49□□□□□ -1.53
SMC1A-201ENST00000322213 RNF152Q8N8N0 203 aa5.49□□□□□ -1.53
SMC1A-201ENST00000322213 F8WEM9 126 aa5.49□□□□□ -1.53
SMC1A-201ENST00000322213 TMEM61Q8N0U2 210 aa5.49□□□□□ -1.53
SMC1A-201ENST00000322213 ZNF503-AS2A6NEH8 195 aa5.49□□□□□ -1.53
SMC1A-201ENST00000322213 GATA1P15976 413 aaPredicted RBP5.49□□□□□ -1.53
SMC1A-201ENST00000322213 IGHV1OR15-1A0A075B7D0 117 aa5.49□□□□□ -1.53
SMC1A-201ENST00000322213 MBD6Q96DN6 1003 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 UPK3BQ9BT76 320 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 NDUFA4O00483 81 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 COX7CP15954 63 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 NEXN-AS1Q8NBZ9 246 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 PROK2Q9HC23 129 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
SMC1A-201ENST00000322213 C9orf47Q6ZRZ4 202 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 RHPN1-AS1Q9BWJ2 59 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 SERP2Q8N6R1 65 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 TTTY13Q9BZ97 58 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 TRBV30A0A0K0K1B3 111 aa5.48□□□□□ -1.53
SMC1A-201ENST00000322213 PF4P02776 101 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms