RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ETV2O00321 342 aaPredicted RBP13.24□□□□□ -0.29
SMCHD1-201ENST00000320876 TAX1BP3O14907 124 aa13.24□□□□□ -0.29
SMCHD1-201ENST00000320876 TOMM6Q96B49 74 aa13.23□□□□□ -0.29
SMCHD1-201ENST00000320876 HOXB4P17483 251 aaPredicted RBP13.23□□□□□ -0.29
SMCHD1-201ENST00000320876 ELANEP08246 267 aa13.23□□□□□ -0.29
SMCHD1-201ENST00000320876 Q6ZQT7 251 aa13.23□□□□□ -0.29
SMCHD1-201ENST00000320876 WFDC2Q14508 124 aa13.22□□□□□ -0.29
SMCHD1-201ENST00000320876 IGKV1OR2-108A0A075B7D4 117 aa13.22□□□□□ -0.29
SMCHD1-201ENST00000320876 IGLV3-9A0A075B6K5 115 aa13.22□□□□□ -0.29
SMCHD1-201ENST00000320876 TRBV10-2A0A0K0K1G8 114 aa13.22□□□□□ -0.29
SMCHD1-201ENST00000320876 FXYD2P54710 66 aa13.22□□□□□ -0.29
SMCHD1-201ENST00000320876 CAMK2N2Q96S95 79 aa13.22□□□□□ -0.29
SMCHD1-201ENST00000320876 RNASE8Q8TDE3 154 aaKnown RBP13.22□□□□□ -0.29
SMCHD1-201ENST00000320876 TECTAO75443 2155 aa13.22□□□□□ -0.29
SMCHD1-201ENST00000320876 TDRG1Q3Y452 100 aa13.21□□□□□ -0.29
SMCHD1-201ENST00000320876 Q6ZR03 302 aa13.21□□□□□ -0.29
SMCHD1-201ENST00000320876 C17orf77Q96MU5 243 aa13.21□□□□□ -0.29
SMCHD1-201ENST00000320876 C9orf47Q6ZRZ4 202 aa13.21□□□□□ -0.29
SMCHD1-201ENST00000320876 CXCL5P42830 114 aa13.21□□□□□ -0.3
SMCHD1-201ENST00000320876 KAAG1Q9UBP8 84 aa13.21□□□□□ -0.3
SMCHD1-201ENST00000320876 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
SMCHD1-201ENST00000320876 TRBV7-3A0A075B6L6 115 aa13.2□□□□□ -0.3
SMCHD1-201ENST00000320876 AGPAT4-IT1Q9H0P7 198 aa13.2□□□□□ -0.3
SMCHD1-201ENST00000320876 C5orf38Q86SI9 138 aa13.19□□□□□ -0.3
SMCHD1-201ENST00000320876 NDUFV3P56181 108 aaKnown RBP13.19□□□□□ -0.3
SMCHD1-201ENST00000320876 GYPEP15421 78 aa13.19□□□□□ -0.3
SMCHD1-201ENST00000320876 C11orf86A6NJI1 115 aa13.18□□□□□ -0.3
SMCHD1-201ENST00000320876 TRBV12-3P01733 135 aa13.18□□□□□ -0.3
SMCHD1-201ENST00000320876 GP9P14770 177 aa13.18□□□□□ -0.3
SMCHD1-201ENST00000320876 MYO18BQ8IUG5 2567 aa13.18□□□□□ -0.3
SMCHD1-201ENST00000320876 E9PLD3 99 aa13.18□□□□□ -0.3
SMCHD1-201ENST00000320876 RAI1Q7Z5J4 1906 aaPredicted RBP13.18□□□□□ -0.3
SMCHD1-201ENST00000320876 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
SMCHD1-201ENST00000320876 IGLV1-44P01699 117 aa13.18□□□□□ -0.3
SMCHD1-201ENST00000320876 ANKRD39Q53RE8 183 aa13.18□□□□□ -0.3
SMCHD1-201ENST00000320876 VPREB3Q9UKI3 123 aa13.17□□□□□ -0.3
SMCHD1-201ENST00000320876 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
SMCHD1-201ENST00000320876 Q96MF0 132 aa13.17□□□□□ -0.3
SMCHD1-201ENST00000320876 CLEC2BQ92478 149 aa13.17□□□□□ -0.3
SMCHD1-201ENST00000320876 UPK3BQ9BT76 320 aa13.17□□□□□ -0.3
SMCHD1-201ENST00000320876 MRPL55Q7Z7F7 128 aaKnown RBP13.16□□□□□ -0.3
SMCHD1-201ENST00000320876 DAND5Q8N907 189 aa13.16□□□□□ -0.3
SMCHD1-201ENST00000320876 PIFOQ8TCI5 191 aa13.16□□□□□ -0.3
SMCHD1-201ENST00000320876 Q9HAA7 133 aa13.16□□□□□ -0.3
SMCHD1-201ENST00000320876 GATA1P15976 413 aaPredicted RBP13.16□□□□□ -0.3
SMCHD1-201ENST00000320876 A0A0J9YY99 117 aa13.16□□□□□ -0.3
SMCHD1-201ENST00000320876 IGLV3-1P01715 115 aa13.16□□□□□ -0.3
SMCHD1-201ENST00000320876 TRAV26-1A0A087WT03 109 aa13.16□□□□□ -0.3
SMCHD1-201ENST00000320876 SEM1Q6ZVN7 128 aa13.16□□□□□ -0.3
SMCHD1-201ENST00000320876 NDUFA1O15239 70 aa13.15□□□□□ -0.3
SMCHD1-201ENST00000320876 TIMM17AQ99595 171 aa13.15□□□□□ -0.3
SMCHD1-201ENST00000320876 Q6ZUT4 128 aa13.15□□□□□ -0.3
SMCHD1-201ENST00000320876 IGLV10-54A0A075B6I4 117 aa13.15□□□□□ -0.3
SMCHD1-201ENST00000320876 LECT2O14960 151 aa13.15□□□□□ -0.3
SMCHD1-201ENST00000320876 CTRLP40313 264 aa13.15□□□□□ -0.3
SMCHD1-201ENST00000320876 IGFL3Q6UXB1 125 aa13.15□□□□□ -0.3
SMCHD1-201ENST00000320876 WDR87Q6ZQQ6 2873 aa13.14□□□□□ -0.31
SMCHD1-201ENST00000320876 CCL24O00175 119 aa13.14□□□□□ -0.31
SMCHD1-201ENST00000320876 LINC00643Q86TS7 51 aa13.14□□□□□ -0.31
SMCHD1-201ENST00000320876 SPTSSBQ8NFR3 76 aa13.14□□□□□ -0.31
SMCHD1-201ENST00000320876 DIAPH2-AS1Q14236 149 aa13.14□□□□□ -0.31
SMCHD1-201ENST00000320876 UNQ6494/PRO21346Q6UXR6 183 aa13.14□□□□□ -0.31
SMCHD1-201ENST00000320876 NPBQ8NG41 125 aa13.14□□□□□ -0.31
SMCHD1-201ENST00000320876 DIRC1Q969H9 104 aa13.13□□□□□ -0.31
SMCHD1-201ENST00000320876 UQCRQO14949 82 aa13.13□□□□□ -0.31
SMCHD1-201ENST00000320876 COL4A6Q14031 1691 aa13.13□□□□□ -0.31
SMCHD1-201ENST00000320876 ODF1Q14990 250 aa13.13□□□□□ -0.31
SMCHD1-201ENST00000320876 LINC00173Q6ZV60 143 aa13.13□□□□□ -0.31
SMCHD1-201ENST00000320876 NDUFA11Q86Y39 141 aa13.13□□□□□ -0.31
SMCHD1-201ENST00000320876 GTSF1Q8WW33 167 aa13.12□□□□□ -0.31
SMCHD1-201ENST00000320876 NCR3O14931 201 aa13.12□□□□□ -0.31
SMCHD1-201ENST00000320876 UBE2AP49459 152 aa13.12□□□□□ -0.31
SMCHD1-201ENST00000320876 ARTNQ5T4W7 220 aa13.12□□□□□ -0.31
SMCHD1-201ENST00000320876 Q8N1Y9 231 aa13.12□□□□□ -0.31
SMCHD1-201ENST00000320876 WI2-2373I1.2A0A1W2PRP0 233 aa13.12□□□□□ -0.31
SMCHD1-201ENST00000320876 RPL39P62891 51 aaKnown RBP13.12□□□□□ -0.31
SMCHD1-201ENST00000320876 MAPK1IP1LQ8NDC0 245 aa13.11□□□□□ -0.31
SMCHD1-201ENST00000320876 FGF23Q9GZV9 251 aaPredicted RBP13.11□□□□□ -0.31
SMCHD1-201ENST00000320876 IGHV1-58A0A0C4DH39 117 aa13.11□□□□□ -0.31
SMCHD1-201ENST00000320876 A0A0J9YXV3 536 aa13.11□□□□□ -0.31
SMCHD1-201ENST00000320876 ATP5EP2Q5VTU8 51 aa13.11□□□□□ -0.31
SMCHD1-201ENST00000320876 ATP5EP56381 51 aaPredicted RBP13.11□□□□□ -0.31
SMCHD1-201ENST00000320876 C4orf48Q5BLP8 95 aa13.11□□□□□ -0.31
SMCHD1-201ENST00000320876 Q8NFD4 153 aa13.1□□□□□ -0.31
SMCHD1-201ENST00000320876 ZNF503-AS2A6NEH8 195 aa13.1□□□□□ -0.31
SMCHD1-201ENST00000320876 NUPR1O60356 82 aa13.1□□□□□ -0.31
SMCHD1-201ENST00000320876 MED14OSP0DP75 135 aa13.1□□□□□ -0.31
SMCHD1-201ENST00000320876 H0Y9J4 135 aa13.1□□□□□ -0.31
SMCHD1-201ENST00000320876 GPR179Q6PRD1 2367 aa13.09□□□□□ -0.31
SMCHD1-201ENST00000320876 TRAV23DV6A0A075B6W5 121 aa13.09□□□□□ -0.31
SMCHD1-201ENST00000320876 TCL1BO95988 128 aa13.09□□□□□ -0.31
SMCHD1-201ENST00000320876 IGKV4-1P06312 121 aa13.09□□□□□ -0.31
SMCHD1-201ENST00000320876 FAM110AQ9BQ89 295 aa13.09□□□□□ -0.31
SMCHD1-201ENST00000320876 I3L2K1 104 aa13.09□□□□□ -0.31
SMCHD1-201ENST00000320876 MIAQ16674 131 aa13.09□□□□□ -0.31
SMCHD1-201ENST00000320876 LRP4O75096 1905 aa13.08□□□□□ -0.31
SMCHD1-201ENST00000320876 TEX22C9J3V5 150 aa13.08□□□□□ -0.31
SMCHD1-201ENST00000320876 SLX1AQ9BQ83 275 aa13.08□□□□□ -0.32
SMCHD1-201ENST00000320876 HHLA3Q9XRX5 114 aa13.08□□□□□ -0.32
SMCHD1-201ENST00000320876 BDP1A6H8Y1 2624 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms