RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 BCL2L11O43521 198 aa11.91□□□□□ -0.5
TPM1-203ENST00000317516 H2AFB1P0C5Y9 115 aa11.91□□□□□ -0.5
TPM1-203ENST00000317516 GCSHP23434 173 aa11.91□□□□□ -0.5
TPM1-203ENST00000317516 FAM74A4Q5TZK3 123 aa11.91□□□□□ -0.5
TPM1-203ENST00000317516 ZFP82Q8N141 532 aa11.91□□□□□ -0.5
TPM1-203ENST00000317516 SFRP2Q96HF1 295 aa11.91□□□□□ -0.5
TPM1-203ENST00000317516 HSPG2P98160 4391 aa11.9□□□□□ -0.5
TPM1-203ENST00000317516 LINC00694P0DN24 101 aa11.9□□□□□ -0.5
TPM1-203ENST00000317516 TOR2AQ5JU69 321 aa11.9□□□□□ -0.5
TPM1-203ENST00000317516 C14orf178Q8N769 122 aaPredicted RBP11.9□□□□□ -0.5
TPM1-203ENST00000317516 NTN5Q8WTR8 489 aaPredicted RBP11.9□□□□□ -0.5
TPM1-203ENST00000317516 TRAV8-3A0A0A6YYJ7 113 aa11.89□□□□□ -0.51
TPM1-203ENST00000317516 A0A1B0GV50 99 aa11.89□□□□□ -0.51
TPM1-203ENST00000317516 LRCOL1A6NCL2 159 aa11.89□□□□□ -0.51
TPM1-203ENST00000317516 BAGE2Q86Y30 109 aa11.89□□□□□ -0.51
TPM1-203ENST00000317516 A0A087WWL8 130 aa11.88□□□□□ -0.51
TPM1-203ENST00000317516 IGLV5-52A0A0A0MRZ9 124 aa11.88□□□□□ -0.51
TPM1-203ENST00000317516 EPM2AB3EWF7 344 aa11.88□□□□□ -0.51
TPM1-203ENST00000317516 KRTAP10-1P60331 282 aa11.88□□□□□ -0.51
TPM1-203ENST00000317516 URGCP-MRPS24S4R325 110 aa11.88□□□□□ -0.51
TPM1-203ENST00000317516 TRBV10-1A0A0K0K1A3 114 aa11.87□□□□□ -0.51
TPM1-203ENST00000317516 SCO2A0A1W2PP80 73 aa11.87□□□□□ -0.51
TPM1-203ENST00000317516 TMUB2Q71RG4 321 aa11.87□□□□□ -0.51
TPM1-203ENST00000317516 Q9UF83 564 aa11.87□□□□□ -0.51
TPM1-203ENST00000317516 CXCL1P09341 107 aa11.86□□□□□ -0.51
TPM1-203ENST00000317516 XGP55808 180 aa11.86□□□□□ -0.51
TPM1-203ENST00000317516 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
TPM1-203ENST00000317516 EIF5AL1Q6IS14 154 aaKnown RBP11.86□□□□□ -0.51
TPM1-203ENST00000317516 Q8N814 137 aa11.86□□□□□ -0.51
TPM1-203ENST00000317516 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
TPM1-203ENST00000317516 MLST8Q9BVC4 326 aa11.86□□□□□ -0.51
TPM1-203ENST00000317516 COX11Q9Y6N1 276 aa11.86□□□□□ -0.51
TPM1-203ENST00000317516 DNAH5Q8TE73 4624 aa11.86□□□□□ -0.51
TPM1-203ENST00000317516 TEX46H3BTG2 121 aa11.85□□□□□ -0.51
TPM1-203ENST00000317516 RAB5CP51148 216 aa11.85□□□□□ -0.51
TPM1-203ENST00000317516 KCNIP4Q6PIL6 250 aa11.84□□□□□ -0.51
TPM1-203ENST00000317516 DAZ4Q86SG3 579 aaKnown RBP11.84□□□□□ -0.51
TPM1-203ENST00000317516 RMI2Q96E14 147 aa11.84□□□□□ -0.51
TPM1-203ENST00000317516 MANBALQ9NQG1 85 aa11.84□□□□□ -0.51
TPM1-203ENST00000317516 DAZ3Q9NR90 486 aaKnown RBP11.84□□□□□ -0.51
TPM1-203ENST00000317516 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
TPM1-203ENST00000317516 RAB4BP61018 213 aa11.83□□□□□ -0.52
TPM1-203ENST00000317516 ELOBQ15370 118 aa11.83□□□□□ -0.52
TPM1-203ENST00000317516 SPANXN1Q5VSR9 72 aa11.83□□□□□ -0.52
TPM1-203ENST00000317516 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.83□□□□□ -0.52
TPM1-203ENST00000317516 FRZBQ92765 325 aa11.83□□□□□ -0.52
TPM1-203ENST00000317516 GNG13Q9P2W3 67 aa11.83□□□□□ -0.52
TPM1-203ENST00000317516 A0A087WX48 190 aa11.82□□□□□ -0.52
TPM1-203ENST00000317516 TRAV1-1A0A0B4J248 108 aa11.82□□□□□ -0.52
TPM1-203ENST00000317516 RPL19P84098 196 aaKnown RBP11.82□□□□□ -0.52
TPM1-203ENST00000317516 PRR27Q6MZM9 219 aa11.82□□□□□ -0.52
TPM1-203ENST00000317516 NIT1Q86X76 327 aa11.82□□□□□ -0.52
TPM1-203ENST00000317516 Q8N3U1 123 aa11.82□□□□□ -0.52
TPM1-203ENST00000317516 CHCHD7Q9BUK0 85 aa11.82□□□□□ -0.52
TPM1-203ENST00000317516 SSBP4Q9BWG4 385 aaPredicted RBP11.82□□□□□ -0.52
TPM1-203ENST00000317516 ABCA13Q86UQ4 5058 aa11.82□□□□□ -0.52
TPM1-203ENST00000317516 SNAI2O43623 268 aa11.81□□□□□ -0.52
TPM1-203ENST00000317516 OR5AL1P0C617 328 aa11.81□□□□□ -0.52
TPM1-203ENST00000317516 RPL35P42766 123 aaKnown RBP11.81□□□□□ -0.52
TPM1-203ENST00000317516 UBE2D3P61077 147 aa11.81□□□□□ -0.52
TPM1-203ENST00000317516 UBE2D2P62837 147 aa11.81□□□□□ -0.52
TPM1-203ENST00000317516 ZNF56Q15929 161 aa11.81□□□□□ -0.52
TPM1-203ENST00000317516 OR10AG1Q8NH19 301 aa11.81□□□□□ -0.52
TPM1-203ENST00000317516 TMEM70Q9BUB7 260 aa11.81□□□□□ -0.52
TPM1-203ENST00000317516 OR10G8Q8NGN5 311 aa11.8□□□□□ -0.52
TPM1-203ENST00000317516 DAZAP1Q96EP5 407 aaKnown RBP11.8□□□□□ -0.52
TPM1-203ENST00000317516 APOBP04114 4563 aaKnown RBP11.79□□□□□ -0.52
TPM1-203ENST00000317516 F5H697 171 aa11.79□□□□□ -0.52
TPM1-203ENST00000317516 SMIM17P0DL12 118 aa11.79□□□□□ -0.52
TPM1-203ENST00000317516 CCL20P78556 96 aa11.79□□□□□ -0.52
TPM1-203ENST00000317516 C11orf52Q96A22 123 aa11.79□□□□□ -0.52
TPM1-203ENST00000317516 KLK12Q9UKR0 248 aa11.79□□□□□ -0.52
TPM1-203ENST00000317516 TMEM262E9PQX1 116 aa11.78□□□□□ -0.52
TPM1-203ENST00000317516 FAM229AH3BQW9 127 aa11.77□□□□□ -0.53
TPM1-203ENST00000317516 IFNA1P01562 189 aa11.77□□□□□ -0.53
TPM1-203ENST00000317516 C1QBP02746 253 aa11.77□□□□□ -0.53
TPM1-203ENST00000317516 RPS20P60866 119 aaKnown RBP11.77□□□□□ -0.53
TPM1-203ENST00000317516 Q0VG73 95 aa11.77□□□□□ -0.53
TPM1-203ENST00000317516 Q5VSD8 79 aa11.77□□□□□ -0.53
TPM1-203ENST00000317516 IGKV2D-24A0A075B6R9 120 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 TRBV6-8A0A0A6YYG3 113 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 MUC21A0A0G2JKD1 596 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 MUC21A0A140T8X8 626 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 PDE6DO43924 150 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 INAFM2P0DMQ5 153 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 SULT1A2P50226 295 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 SSTP61278 116 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 PKIAP61925 76 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 Q8N976 141 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 UBE2WQ96B02 151 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 SMIM12Q96EX1 92 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 DERL1Q9BUN8 251 aa11.76□□□□□ -0.53
TPM1-203ENST00000317516 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
TPM1-203ENST00000317516 RBFOX3A6NFN3 312 aa11.75□□□□□ -0.53
TPM1-203ENST00000317516 LECT2O14960 151 aa11.75□□□□□ -0.53
TPM1-203ENST00000317516 SMR3BP02814 79 aaPredicted RBP11.75□□□□□ -0.53
TPM1-203ENST00000317516 GNG4P50150 75 aa11.75□□□□□ -0.53
TPM1-203ENST00000317516 CENPWQ5EE01 88 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms