RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 POLEQ07864 2286 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 KLLNB2CW77 178 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 I3L3M4 83 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 DGAT2L7PQ6IED9 249 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 PTPRBP23467 1997 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 RNASE3P12724 160 aaKnown RBP3.6□□□□□ -1.83
PTPN13-201ENST00000316707 FOXC1Q12948 553 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 NDUFA12Q9UI09 145 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 H7C2G1 150 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 LST1O00453 97 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 PRB3Q04118 309 aaPredicted RBP3.6□□□□□ -1.83
PTPN13-201ENST00000316707 LY6DQ14210 128 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 SUMO4Q6EEV6 95 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 Q6ZS46 218 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 LINC00643Q86TS7 51 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 EMP1P54849 157 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 PRR9Q5T870 116 aa3.6□□□□□ -1.83
PTPN13-201ENST00000316707 TRGV11A0A075B6L2 103 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 A0A0J9YXV3 536 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 K7EMT4 169 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 TGFAP01135 160 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 TCF15Q12870 199 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 MEIG1Q5JSS6 88 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 ZNRF2Q8NHG8 242 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 FAM19A4Q96LR4 140 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 DAZ1Q9NQZ3 744 aaKnown RBP3.59□□□□□ -1.83
PTPN13-201ENST00000316707 IGHV3-49A0A0A0MS15 119 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 IGHV3-66A0A0C4DH42 116 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 HERV-K104P63124 156 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 ZNF56Q15929 161 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 SIRPDQ9H106 197 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 ICOSQ9Y6W8 199 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 DSCAMO60469 2012 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 SOCS3O14543 225 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 BEX4Q9NWD9 120 aaPredicted RBP3.59□□□□□ -1.83
PTPN13-201ENST00000316707 SPTBN1Q01082 2364 aaKnown RBP3.59□□□□□ -1.83
PTPN13-201ENST00000316707 TSPEAR-AS2P59090 65 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 RHPN1-AS1Q9BWJ2 59 aa3.59□□□□□ -1.83
PTPN13-201ENST00000316707 PLXNB1O43157 2135 aa3.59□□□□□ -1.84
PTPN13-201ENST00000316707 ABCA4P78363 2273 aa3.59□□□□□ -1.84
PTPN13-201ENST00000316707 IGHV1-58A0A0C4DH39 117 aa3.59□□□□□ -1.84
PTPN13-201ENST00000316707 IGHV3-30-3P0DP02 117 aa3.59□□□□□ -1.84
PTPN13-201ENST00000316707 ZNF415Q09FC8 603 aa3.59□□□□□ -1.84
PTPN13-201ENST00000316707 DAND5Q8N907 189 aa3.59□□□□□ -1.84
PTPN13-201ENST00000316707 TEX49A0A1B0GTD5 131 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 UBE2L6O14933 153 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 TRIAP1O43715 76 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 IGHV4-39P01824 125 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 PIK3CD-AS1Q5SR53 167 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 UBE2E2Q96LR5 201 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 RIF1Q5UIP0 2472 aaKnown RBP3.58□□□□□ -1.84
PTPN13-201ENST00000316707 TLN1Q9Y490 2541 aaKnown RBP3.58□□□□□ -1.84
PTPN13-201ENST00000316707 G3V318 75 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 J3KRW8 73 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 PF4V1P10720 104 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 RPL39P62891 51 aaKnown RBP3.58□□□□□ -1.84
PTPN13-201ENST00000316707 MIAQ16674 131 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 TMEM61Q8N0U2 210 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 OVOL2Q9BRP0 275 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 M0QY20 66 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 GNRH2O43555 120 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 TRACP01848 142 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 CXCL5P42830 114 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 KLRB1Q12918 225 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 C9orf85Q96MD7 179 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 RNF223E7ERA6 249 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 CCDC179H3BU77 68 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 UQCRQO14949 82 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 IGF1P05019 195 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 OTOGLQ3ZCN5 2332 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 ACACAQ13085 2346 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 CD28P10747 220 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 SNRPD3P62318 126 aaKnown RBP3.58□□□□□ -1.84
PTPN13-201ENST00000316707 FAM222AQ5U5X8 452 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 TNFRSF18Q9Y5U5 241 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 FAM74A4Q5TZK3 123 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 PPDPFQ9H3Y8 114 aa3.58□□□□□ -1.84
PTPN13-201ENST00000316707 PTPRZ1P23471 2315 aaPredicted RBP3.57□□□□□ -1.84
PTPN13-201ENST00000316707 IGHV1OR15-1A0A075B7D0 117 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 MRPS36P82909 103 aaKnown RBP3.57□□□□□ -1.84
PTPN13-201ENST00000316707 DNAJC30Q96LL9 226 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 TECTAO75443 2155 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 IGLV4-3A0A075B6K6 122 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 PF4P02776 101 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 SAA4P35542 130 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 LINC01560Q8TB33 94 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 NPFFO15130 113 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 A0A087WWL8 130 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 ZNF580Q9UK33 172 aa3.57□□□□□ -1.84
PTPN13-201ENST00000316707 H7C423 109 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 Q6ZQT7 251 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 LINC00526Q96FQ7 95 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 SPXQ9BT56 116 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 PRORYQ9H606 182 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 TINCRA0A1B0GVN0 87 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 COX7A2LO14548 114 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 TIRAPP58753 221 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 C20orf173Q96LM9 149 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 IGHV3-16A0A0C4DH30 117 aa3.56□□□□□ -1.84
PTPN13-201ENST00000316707 CRLF1O75462 422 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms