RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 A0A1W2PPM0 123 aa10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 RPL35AP18077 110 aaKnown RBP10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 SCRT2Q9NQ03 307 aa10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 IGHV4OR15-8A0A075B7B6 117 aa10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 A0A087WW49 117 aa10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 SPTBN5Q9NRC6 3674 aaKnown RBP10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 A0A087WX48 190 aa10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 K7EMT4 169 aa10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 Q71RC1 249 aaPredicted RBP10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
PCDHB9-201ENST00000316105 ZNF292O60281 2723 aa10.22□□□□□ -0.77
PCDHB9-201ENST00000316105 PMVKQ15126 192 aa10.22□□□□□ -0.77
PCDHB9-201ENST00000316105 GPHB5Q86YW7 130 aa10.22□□□□□ -0.77
PCDHB9-201ENST00000316105 TRGV4A0A0C4DH28 118 aa10.22□□□□□ -0.77
PCDHB9-201ENST00000316105 IGHV3-16A0A0C4DH30 117 aa10.22□□□□□ -0.77
PCDHB9-201ENST00000316105 TAX1BP3O14907 124 aa10.22□□□□□ -0.77
PCDHB9-201ENST00000316105 FOXI2Q6ZQN5 318 aa10.22□□□□□ -0.77
PCDHB9-201ENST00000316105 DPH3Q96FX2 82 aa10.22□□□□□ -0.77
PCDHB9-201ENST00000316105 SRSF2Q01130 221 aaKnown RBP10.22□□□□□ -0.77
PCDHB9-201ENST00000316105 SS18L2Q9UHA2 77 aa10.21□□□□□ -0.77
PCDHB9-201ENST00000316105 PRADC1Q9BSG0 188 aa10.21□□□□□ -0.77
PCDHB9-201ENST00000316105 TP73-AS1Q9UF72 201 aa10.21□□□□□ -0.78
PCDHB9-201ENST00000316105 MRPS12O15235 138 aaKnown RBP10.21□□□□□ -0.78
PCDHB9-201ENST00000316105 DLX4Q92988 240 aaPredicted RBP10.21□□□□□ -0.78
PCDHB9-201ENST00000316105 C20orf173Q96LM9 149 aa10.21□□□□□ -0.78
PCDHB9-201ENST00000316105 TOMM7Q9P0U1 55 aa10.21□□□□□ -0.78
PCDHB9-201ENST00000316105 RPL36AP83881 106 aaKnown RBP10.2□□□□□ -0.78
PCDHB9-201ENST00000316105 RPL36ALQ969Q0 106 aaKnown RBP10.2□□□□□ -0.78
PCDHB9-201ENST00000316105 TTTY13Q9BZ97 58 aa10.2□□□□□ -0.78
PCDHB9-201ENST00000316105 PRSS29PA6NIE9 313 aa10.2□□□□□ -0.78
PCDHB9-201ENST00000316105 I3L3M4 83 aa10.2□□□□□ -0.78
PCDHB9-201ENST00000316105 ABCA12Q86UK0 2595 aa10.2□□□□□ -0.78
PCDHB9-201ENST00000316105 F8W735 103 aaPredicted RBP10.2□□□□□ -0.78
PCDHB9-201ENST00000316105 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
PCDHB9-201ENST00000316105 TRAV26-1A0A087WT03 109 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 H3BMG7 143 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 SCGB1A1P11684 91 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 SPXQ9BT56 116 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 COL6A3P12111 3177 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 SUMO4Q6EEV6 95 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 MYMXA0A1B0GTQ4 84 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 B5MCH6 92 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 AMTNQ6UX39 209 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 PLEKHB2Q96CS7 222 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 PGPEP1Q9NXJ5 209 aa10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 PRRC2AP48634 2157 aaKnown RBP10.19□□□□□ -0.78
PCDHB9-201ENST00000316105 F8W1H4 67 aa10.18□□□□□ -0.78
PCDHB9-201ENST00000316105 RHODO00212 210 aa10.18□□□□□ -0.78
PCDHB9-201ENST00000316105 IGHG4P01861 327 aa10.18□□□□□ -0.78
PCDHB9-201ENST00000316105 SIVA1O15304 175 aa10.18□□□□□ -0.78
PCDHB9-201ENST00000316105 CMC4P56277 68 aaPredicted RBP10.18□□□□□ -0.78
PCDHB9-201ENST00000316105 Q6ZS46 218 aa10.18□□□□□ -0.78
PCDHB9-201ENST00000316105 SPATA12Q7Z6I5 190 aa10.18□□□□□ -0.78
PCDHB9-201ENST00000316105 Q8N1Y9 231 aa10.18□□□□□ -0.78
PCDHB9-201ENST00000316105 IGHV3-38A0A0C4DH36 116 aa10.17□□□□□ -0.78
PCDHB9-201ENST00000316105 C10orf99Q6UWK7 81 aa10.17□□□□□ -0.78
PCDHB9-201ENST00000316105 APRG1Q8IVJ8 170 aa10.17□□□□□ -0.78
PCDHB9-201ENST00000316105 CLPSL1A2RUU4 121 aa10.17□□□□□ -0.78
PCDHB9-201ENST00000316105 FRYLO94915 3013 aa10.17□□□□□ -0.78
PCDHB9-201ENST00000316105 K7EMI3 77 aa10.17□□□□□ -0.78
PCDHB9-201ENST00000316105 K7ERJ3 54 aa10.17□□□□□ -0.78
PCDHB9-201ENST00000316105 JPT2Q9H910 190 aa10.17□□□□□ -0.78
PCDHB9-201ENST00000316105 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
PCDHB9-201ENST00000316105 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
PCDHB9-201ENST00000316105 CRYBA4P53673 196 aa10.16□□□□□ -0.78
PCDHB9-201ENST00000316105 ODF1Q14990 250 aa10.16□□□□□ -0.78
PCDHB9-201ENST00000316105 TIMM21Q9BVV7 248 aa10.16□□□□□ -0.78
PCDHB9-201ENST00000316105 NPC2P61916 151 aa10.16□□□□□ -0.78
PCDHB9-201ENST00000316105 SH2D6Q7Z4S9 175 aa10.16□□□□□ -0.78
PCDHB9-201ENST00000316105 G3V4G9 280 aa10.16□□□□□ -0.78
PCDHB9-201ENST00000316105 CHCHD5Q9BSY4 110 aa10.16□□□□□ -0.78
PCDHB9-201ENST00000316105 ADARB2-AS1A8MUL3 147 aa10.15□□□□□ -0.78
PCDHB9-201ENST00000316105 C11orf21Q9P2W6 132 aa10.15□□□□□ -0.78
PCDHB9-201ENST00000316105 TMEM89A2RUT3 159 aa10.15□□□□□ -0.78
PCDHB9-201ENST00000316105 ZFAND2AQ8N6M9 145 aa10.15□□□□□ -0.78
PCDHB9-201ENST00000316105 A0A0J9YX75 114 aa10.15□□□□□ -0.78
PCDHB9-201ENST00000316105 SMIM20Q8N5G0 67 aa10.15□□□□□ -0.78
PCDHB9-201ENST00000316105 GATD1Q8NB37 220 aa10.15□□□□□ -0.78
PCDHB9-201ENST00000316105 DNAL4O96015 105 aa10.15□□□□□ -0.79
PCDHB9-201ENST00000316105 CEND1Q8N111 149 aa10.15□□□□□ -0.79
PCDHB9-201ENST00000316105 URB1-AS1Q96HZ7 61 aa10.15□□□□□ -0.79
PCDHB9-201ENST00000316105 MDFICQ9P1T7 246 aa10.15□□□□□ -0.79
PCDHB9-201ENST00000316105 TRAV13-1A0A0B4J241 112 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 J3QKU1 62 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 MED14OSP0DP75 135 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 CFHR3Q02985 330 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 C1QTNF4Q9BXJ3 329 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 DSPP15924 2871 aaKnown RBP10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 COL27A1Q8IZC6 1860 aaPredicted RBP10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 M0R2P5 195 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 ZFP2Q6ZN57 461 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 AVPP01185 164 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 RPL39P62891 51 aaKnown RBP10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 RNASE13Q5GAN3 156 aaKnown RBP10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 BOD1L2Q8IYS8 172 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
PCDHB9-201ENST00000316105 CCL24O00175 119 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms