RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 SDHAF1A6NFY7 115 aa10.38□□□□□ -0.75
MKS1-201ENST00000313863 IGHV3-11P01762 117 aa10.38□□□□□ -0.75
MKS1-201ENST00000313863 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
MKS1-201ENST00000313863 DEFB1P60022 68 aa10.38□□□□□ -0.75
MKS1-201ENST00000313863 ZNF876PQ49A33 203 aa10.38□□□□□ -0.75
MKS1-201ENST00000313863 TMEM170BQ5T4T1 132 aa10.38□□□□□ -0.75
MKS1-201ENST00000313863 IGHV3-30P01768 117 aa10.37□□□□□ -0.75
MKS1-201ENST00000313863 IGHV3-30-5P0DP03 117 aa10.37□□□□□ -0.75
MKS1-201ENST00000313863 CKS1BP61024 79 aa10.37□□□□□ -0.75
MKS1-201ENST00000313863 J3QQQ9 107 aa10.37□□□□□ -0.75
MKS1-201ENST00000313863 NSUN5P1Q3KNT7 163 aa10.37□□□□□ -0.75
MKS1-201ENST00000313863 NFE4Q86UQ8 179 aa10.37□□□□□ -0.75
MKS1-201ENST00000313863 TEN1Q86WV5 123 aa10.37□□□□□ -0.75
MKS1-201ENST00000313863 C10orf126Q8N4M7 172 aa10.37□□□□□ -0.75
MKS1-201ENST00000313863 NBASA2RRP1 2371 aa10.36□□□□□ -0.75
MKS1-201ENST00000313863 IGHV3OR16-10A0A075B7F0 116 aa10.36□□□□□ -0.75
MKS1-201ENST00000313863 A6NDX4 124 aa10.36□□□□□ -0.75
MKS1-201ENST00000313863 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
MKS1-201ENST00000313863 INSL3P51460 131 aa10.36□□□□□ -0.75
MKS1-201ENST00000313863 PRO1854Q9UHT4 67 aa10.36□□□□□ -0.75
MKS1-201ENST00000313863 IGKV3-7A0A075B6H7 116 aa10.35□□□□□ -0.75
MKS1-201ENST00000313863 A8MWV9 139 aa10.35□□□□□ -0.75
MKS1-201ENST00000313863 LEPROTO15243 131 aa10.35□□□□□ -0.75
MKS1-201ENST00000313863 IGLV1-40P01703 118 aa10.35□□□□□ -0.75
MKS1-201ENST00000313863 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
MKS1-201ENST00000313863 RPL39P62891 51 aaKnown RBP10.35□□□□□ -0.75
MKS1-201ENST00000313863 BRD3OSQ6XYD6 125 aa10.35□□□□□ -0.75
MKS1-201ENST00000313863 TRPT1Q86TN4 253 aaKnown RBP10.35□□□□□ -0.75
MKS1-201ENST00000313863 SBSPONQ8IVN8 264 aa10.35□□□□□ -0.75
MKS1-201ENST00000313863 ZNF418Q8TF45 676 aaPredicted RBP10.35□□□□□ -0.75
MKS1-201ENST00000313863 C9orf85Q96MD7 179 aa10.35□□□□□ -0.75
MKS1-201ENST00000313863 A0A087WWL8 130 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 CFC1BP0CG36 223 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 CFC1P0CG37 223 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 SCGB1C2P0DMR2 95 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 EMP1P54849 157 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 LY6EQ16553 131 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 H3BUX3 64 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 M0QXV9 152 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 ZNF580Q9UK33 172 aa10.34□□□□□ -0.75
MKS1-201ENST00000313863 IGHV3-16A0A0C4DH30 117 aa10.33□□□□□ -0.76
MKS1-201ENST00000313863 TCL1BO95988 128 aa10.33□□□□□ -0.76
MKS1-201ENST00000313863 CRYBA4P53673 196 aa10.33□□□□□ -0.76
MKS1-201ENST00000313863 ZNF56Q15929 161 aa10.33□□□□□ -0.76
MKS1-201ENST00000313863 ZNRF2Q8NHG8 242 aa10.33□□□□□ -0.76
MKS1-201ENST00000313863 CDIP1Q9H305 208 aa10.33□□□□□ -0.76
MKS1-201ENST00000313863 JPT2Q9H910 190 aa10.33□□□□□ -0.76
MKS1-201ENST00000313863 TMEM262E9PQX1 116 aa10.32□□□□□ -0.76
MKS1-201ENST00000313863 IGHV4-39P01824 125 aa10.32□□□□□ -0.76
MKS1-201ENST00000313863 TSPEAR-AS2P59090 65 aa10.32□□□□□ -0.76
MKS1-201ENST00000313863 SNRPD3P62318 126 aaKnown RBP10.32□□□□□ -0.76
MKS1-201ENST00000313863 DCANP1Q8TF63 244 aa10.32□□□□□ -0.76
MKS1-201ENST00000313863 MDFICQ9P1T7 246 aa10.32□□□□□ -0.76
MKS1-201ENST00000313863 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.32□□□□□ -0.76
MKS1-201ENST00000313863 TMEM223A0PJW6 202 aa10.32□□□□□ -0.76
MKS1-201ENST00000313863 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
MKS1-201ENST00000313863 WFDC12Q8WWY7 111 aa10.32□□□□□ -0.76
MKS1-201ENST00000313863 AMELXQ99217 191 aa10.32□□□□□ -0.76
MKS1-201ENST00000313863 ZNF256Q9Y2P7 627 aaPredicted RBP10.32□□□□□ -0.76
MKS1-201ENST00000313863 A0A0J9YX75 114 aa10.31□□□□□ -0.76
MKS1-201ENST00000313863 M0QY20 66 aa10.31□□□□□ -0.76
MKS1-201ENST00000313863 SFTA2Q6UW10 78 aa10.31□□□□□ -0.76
MKS1-201ENST00000313863 Q6ZS46 218 aa10.31□□□□□ -0.76
MKS1-201ENST00000313863 HIVEP3Q5T1R4 2406 aa10.31□□□□□ -0.76
MKS1-201ENST00000313863 ABCA2Q9BZC7 2435 aa10.31□□□□□ -0.76
MKS1-201ENST00000313863 TRAV26-1A0A087WT03 109 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 A0A0B4J2C4 111 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 SPINK8P0C7L1 97 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 SRD5A1P18405 259 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 GEMIN7Q9H840 131 aaKnown RBP10.3□□□□□ -0.76
MKS1-201ENST00000313863 IGHV1OR15-1A0A075B7D0 117 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 I3L3M4 83 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 ZNF688P0C7X2 276 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 CFHR3Q02985 330 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 C20orf203Q8NBC4 194 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 CSMD1Q96PZ7 3565 aa10.3□□□□□ -0.76
MKS1-201ENST00000313863 P0DMU3 169 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 FAM231AP0DMU4 169 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 FAM231CP0DMU5 169 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 IGHV4-38-2P0DP08 117 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 Q6ZUT4 128 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 ERG28Q9UKR5 140 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 COL6A6A6NMZ7 2263 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 TRGV11A0A075B6L2 103 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 TMEM89A2RUT3 159 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 CARD19Q96LW7 228 aa10.29□□□□□ -0.76
MKS1-201ENST00000313863 IGHV4-61A0A0C4DH41 118 aa10.28□□□□□ -0.76
MKS1-201ENST00000313863 A4D1N5 150 aa10.28□□□□□ -0.76
MKS1-201ENST00000313863 RHODO00212 210 aa10.28□□□□□ -0.76
MKS1-201ENST00000313863 BLCAPP62952 87 aa10.28□□□□□ -0.76
MKS1-201ENST00000313863 IGHV3-33P01772 117 aa10.27□□□□□ -0.76
MKS1-201ENST00000313863 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.76
MKS1-201ENST00000313863 C10orf105Q8TEF2 133 aa10.27□□□□□ -0.76
MKS1-201ENST00000313863 IGF2RP11717 2491 aa10.27□□□□□ -0.77
MKS1-201ENST00000313863 ATRXP46100 2492 aa10.27□□□□□ -0.77
MKS1-201ENST00000313863 Q8N1Y9 231 aa10.27□□□□□ -0.77
MKS1-201ENST00000313863 ANKRD29Q8N6D5 301 aa10.27□□□□□ -0.77
MKS1-201ENST00000313863 TMEM263Q8WUH6 116 aaKnown RBP10.27□□□□□ -0.77
MKS1-201ENST00000313863 PTH2Q96A98 100 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms