RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 TEX22C9J3V5 150 aa9.44□□□□□ -0.9
EBF1-201ENST00000313708 IGHG2P01859 326 aa9.44□□□□□ -0.9
EBF1-201ENST00000313708 PFN2P35080 140 aa9.44□□□□□ -0.9
EBF1-201ENST00000313708 MED13Q9UHV7 2174 aa9.44□□□□□ -0.9
EBF1-201ENST00000313708 HAMPP81172 84 aa9.43□□□□□ -0.9
EBF1-201ENST00000313708 IGHV3-30-3P0DP02 117 aa9.43□□□□□ -0.9
EBF1-201ENST00000313708 JPT2Q9H910 190 aa9.43□□□□□ -0.9
EBF1-201ENST00000313708 LHBP01229 141 aa9.43□□□□□ -0.9
EBF1-201ENST00000313708 WT1P19544 449 aaPredicted RBP9.42□□□□□ -0.9
EBF1-201ENST00000313708 Q9H8V8 135 aa9.42□□□□□ -0.9
EBF1-201ENST00000313708 SNRPD3P62318 126 aaKnown RBP9.42□□□□□ -0.9
EBF1-201ENST00000313708 LST1O00453 97 aa9.42□□□□□ -0.9
EBF1-201ENST00000313708 C1orf195Q5TG92 126 aa9.42□□□□□ -0.9
EBF1-201ENST00000313708 NAV3Q8IVL0 2385 aa9.42□□□□□ -0.9
EBF1-201ENST00000313708 PKDREJQ9NTG1 2253 aa9.42□□□□□ -0.9
EBF1-201ENST00000313708 IGHV3OR16-12A0A075B7B8 117 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 PRB1P04280 392 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 CGB3P0DN86 165 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 CGB7P0DN87 165 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 LOXP28300 417 aaPredicted RBP9.41□□□□□ -0.9
EBF1-201ENST00000313708 MIAQ16674 131 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 TRBV7-7A0A0K0K1E9 115 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 POLEQ07864 2286 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 FSTL3O95633 263 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 TET2Q6N021 2002 aaPredicted RBP9.41□□□□□ -0.9
EBF1-201ENST00000313708 AKAP6Q13023 2319 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 B9A039 149 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 PSMB8P28062 276 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 LAMTOR3Q9UHA4 124 aa9.41□□□□□ -0.9
EBF1-201ENST00000313708 FDCSPQ8NFU4 85 aa9.4□□□□□ -0.9
EBF1-201ENST00000313708 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
EBF1-201ENST00000313708 KIR2DL5BQ8NHK3 375 aa9.4□□□□□ -0.9
EBF1-201ENST00000313708 TRBV7-1A0A0A6YYK4 115 aa9.4□□□□□ -0.91
EBF1-201ENST00000313708 USP17L23D6RBM5 183 aa9.4□□□□□ -0.91
EBF1-201ENST00000313708 TSPEAR-AS2P59090 65 aa9.4□□□□□ -0.91
EBF1-201ENST00000313708 F6UB75 175 aa9.4□□□□□ -0.91
EBF1-201ENST00000313708 CXCL5P42830 114 aa9.4□□□□□ -0.91
EBF1-201ENST00000313708 COX7A2LO14548 114 aa9.39□□□□□ -0.91
EBF1-201ENST00000313708 IGLV1-44P01699 117 aa9.39□□□□□ -0.91
EBF1-201ENST00000313708 MALP21145 153 aa9.39□□□□□ -0.91
EBF1-201ENST00000313708 UCNP55089 124 aa9.39□□□□□ -0.91
EBF1-201ENST00000313708 TRAV13-2A0A0B4J235 113 aa9.39□□□□□ -0.91
EBF1-201ENST00000313708 SBSPONQ8IVN8 264 aa9.39□□□□□ -0.91
EBF1-201ENST00000313708 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
EBF1-201ENST00000313708 MUC22E2RYF6 1773 aaPredicted RBP9.39□□□□□ -0.91
EBF1-201ENST00000313708 RPL35AP18077 110 aaKnown RBP9.39□□□□□ -0.91
EBF1-201ENST00000313708 MDS2Q8NDY4 140 aa9.39□□□□□ -0.91
EBF1-201ENST00000313708 PRSS33Q8NF86 280 aa9.39□□□□□ -0.91
EBF1-201ENST00000313708 NXPH4O95158 308 aa9.38□□□□□ -0.91
EBF1-201ENST00000313708 TMEM105Q8N8V8 129 aa9.38□□□□□ -0.91
EBF1-201ENST00000313708 CACNA1EQ15878 2313 aa9.38□□□□□ -0.91
EBF1-201ENST00000313708 Q6ZSV7 163 aa9.38□□□□□ -0.91
EBF1-201ENST00000313708 KLK9Q9UKQ9 250 aa9.38□□□□□ -0.91
EBF1-201ENST00000313708 IGHV3-38A0A0C4DH36 116 aa9.38□□□□□ -0.91
EBF1-201ENST00000313708 TIRAPP58753 221 aa9.38□□□□□ -0.91
EBF1-201ENST00000313708 CEP350Q5VT06 3117 aa9.37□□□□□ -0.91
EBF1-201ENST00000313708 ZNRF2Q8NHG8 242 aa9.37□□□□□ -0.91
EBF1-201ENST00000313708 RNASE6Q93091 150 aaKnown RBP9.37□□□□□ -0.91
EBF1-201ENST00000313708 IGHV1-58A0A0C4DH39 117 aa9.37□□□□□ -0.91
EBF1-201ENST00000313708 RPL36AP83881 106 aaKnown RBP9.37□□□□□ -0.91
EBF1-201ENST00000313708 RPL36ALQ969Q0 106 aaKnown RBP9.37□□□□□ -0.91
EBF1-201ENST00000313708 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
EBF1-201ENST00000313708 CTSGP08311 255 aa9.37□□□□□ -0.91
EBF1-201ENST00000313708 HOXB4P17483 251 aaPredicted RBP9.37□□□□□ -0.91
EBF1-201ENST00000313708 MBD3L2Q8NHZ7 208 aaPredicted RBP9.37□□□□□ -0.91
EBF1-201ENST00000313708 PTPRSQ13332 1948 aa9.36□□□□□ -0.91
EBF1-201ENST00000313708 IGLV3-9A0A075B6K5 115 aa9.36□□□□□ -0.91
EBF1-201ENST00000313708 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
EBF1-201ENST00000313708 A0A087WVE0 104 aa9.36□□□□□ -0.91
EBF1-201ENST00000313708 IGHV1-69P01742 117 aa9.36□□□□□ -0.91
EBF1-201ENST00000313708 LY6EQ16553 131 aa9.36□□□□□ -0.91
EBF1-201ENST00000313708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
EBF1-201ENST00000313708 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
EBF1-201ENST00000313708 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
EBF1-201ENST00000313708 TRAV12-2A0A075B6T6 113 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 ELANEP08246 267 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 TMEM61Q8N0U2 210 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 UTRNP46939 3433 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 PRR14LQ5THK1 2151 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 DEFB1P60022 68 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 DPH3Q96FX2 82 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 CNFNQ9BYD5 112 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 ADAMTS20P59510 1910 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 BUB3O43684 328 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 MSMPQ1L6U9 139 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 IGLV11-55A0A075B6I3 123 aa9.35□□□□□ -0.91
EBF1-201ENST00000313708 IGLV4-69A0A075B6H9 119 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 LY6G6EA0A0G2JKS1 128 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 J3QLI3 93 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 RPS28P62857 69 aaKnown RBP9.34□□□□□ -0.91
EBF1-201ENST00000313708 PRO0628Q9UI54 55 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 U3KQA8 63 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 TMEM86BQ8N661 226 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 IGHV7-4-1A0A0J9YVY3 117 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 SEC61GP60059 68 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 LY6DQ14210 128 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 A0A0G2JNJ9 132 aa9.34□□□□□ -0.91
EBF1-201ENST00000313708 MBD3L4A6NDZ8 208 aaPredicted RBP9.34□□□□□ -0.91
EBF1-201ENST00000313708 MBD3L3A6NE82 208 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms