RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 Q8TAT8 98 aa6.88□□□□□ -1.31
COL6A5-202ENST00000312481 EBI3Q14213 229 aa6.88□□□□□ -1.31
COL6A5-202ENST00000312481 SMIM9A6NGZ8 99 aa6.87□□□□□ -1.31
COL6A5-202ENST00000312481 LINC00479Q96M42 142 aa6.87□□□□□ -1.31
COL6A5-202ENST00000312481 NDUFB1O75438 58 aa6.87□□□□□ -1.31
COL6A5-202ENST00000312481 IGHG2P01859 326 aa6.87□□□□□ -1.31
COL6A5-202ENST00000312481 DAND5Q8N907 189 aa6.87□□□□□ -1.31
COL6A5-202ENST00000312481 V9GYY9 64 aa6.87□□□□□ -1.31
COL6A5-202ENST00000312481 TRAV8-3A0A0A6YYJ7 113 aa6.87□□□□□ -1.31
COL6A5-202ENST00000312481 F6UB75 175 aa6.87□□□□□ -1.31
COL6A5-202ENST00000312481 TAX1BP3O14907 124 aa6.87□□□□□ -1.31
COL6A5-202ENST00000312481 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
COL6A5-202ENST00000312481 HOXB4P17483 251 aaPredicted RBP6.86□□□□□ -1.31
COL6A5-202ENST00000312481 TRBV6-5A0A0K0K1A5 114 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 WT1P19544 449 aaPredicted RBP6.86□□□□□ -1.31
COL6A5-202ENST00000312481 TMEM213A2RRL7 107 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 NBL1P41271 181 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 SPRY4Q9C004 299 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 IGHV4OR15-8A0A075B7B6 117 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 A0A087WW49 117 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 SAP30O75446 220 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 COX17Q14061 63 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 MIAQ16674 131 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 FAM215AQ9Y5M1 114 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 CTSGP08311 255 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 C8orf49Q96NF6 230 aa6.86□□□□□ -1.31
COL6A5-202ENST00000312481 TRBV30A0A0K0K1B3 111 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 MTORP42345 2549 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 ZNF503Q96F45 646 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 TIRAPP58753 221 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 FAM120AOSQ5T036 256 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 F8WDY8 70 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 MYCNOSP40205 109 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 HIST1H4AP62805 103 aaKnown RBP6.85□□□□□ -1.31
COL6A5-202ENST00000312481 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 IGLC6P0CF74 106 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 NDUFA11Q86Y39 141 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 CENPVL3A0A0U1RRI6 287 aa6.85□□□□□ -1.31
COL6A5-202ENST00000312481 IGF1P05019 195 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 RSPO4Q2I0M5 234 aaPredicted RBP6.84□□□□□ -1.31
COL6A5-202ENST00000312481 IGLV2-23P01705 113 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 DUX4L9Q6RFH8 374 aaPredicted RBP6.84□□□□□ -1.31
COL6A5-202ENST00000312481 BAALCQ8WXS3 180 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 CRLF1O75462 422 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 IGKV3-20P01619 116 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 PRSS33Q8NF86 280 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 SPINK2P20155 84 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 PRORYQ9H606 182 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 TEX22C9J3V5 150 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 ATP1A1-AS1Q5TC04 95 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 DYNAPQ8N1N2 210 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 KLHL30-AS1Q8NEE0 82 aa6.84□□□□□ -1.31
COL6A5-202ENST00000312481 TMEM263Q8WUH6 116 aaKnown RBP6.84□□□□□ -1.31
COL6A5-202ENST00000312481 OVOL3O00110 214 aa6.84□□□□□ -1.32
COL6A5-202ENST00000312481 RNF144BQ7Z419 303 aa6.84□□□□□ -1.32
COL6A5-202ENST00000312481 ODF3L1Q8IXM7 274 aa6.83□□□□□ -1.32
COL6A5-202ENST00000312481 NDUFC2-KCTD14E9PQ53 114 aa6.83□□□□□ -1.32
COL6A5-202ENST00000312481 IGHV7-81A0A0B4J1V7 117 aa6.83□□□□□ -1.32
COL6A5-202ENST00000312481 TCF15Q12870 199 aa6.83□□□□□ -1.32
COL6A5-202ENST00000312481 C5orf56Q8N8D9 126 aa6.83□□□□□ -1.32
COL6A5-202ENST00000312481 TRBV27A0A0K0K1C4 114 aa6.83□□□□□ -1.32
COL6A5-202ENST00000312481 ANXA2RQ3ZCQ2 193 aa6.83□□□□□ -1.32
COL6A5-202ENST00000312481 IGHV3-49A0A0A0MS15 119 aa6.83□□□□□ -1.32
COL6A5-202ENST00000312481 BAALC-AS2P0C853 105 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 LYPD2Q6UXB3 125 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 K7EQD1 137 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 IGHV3-11P01762 117 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 PRR30Q53SZ7 412 aaPredicted RBP6.82□□□□□ -1.32
COL6A5-202ENST00000312481 COX7A2LO14548 114 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 HIST2H2BCQ6DN03 193 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 HIST2H2BDQ6DRA6 164 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 A0A1W2PRX2 142 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 ODF3BA8MYP8 253 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 PTH2Q96A98 100 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 ZMAT4Q9H898 229 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 IGHV3-35A0A0C4DH35 117 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 IGHV3-23P01764 117 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 BPESC1Q9GZL8 116 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 DKK2Q9UBU2 259 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 CHD8Q9HCK8 2581 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 A0A1B0GW54 56 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 PPDPFQ9H3Y8 114 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 IGHV3-66A0A0C4DH42 116 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 IBA57-AS1B1ANH7 110 aa6.82□□□□□ -1.32
COL6A5-202ENST00000312481 IGHV3OR16-13A0A075B7E8 117 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 IGHV3-74A0A0B4J1X5 117 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 NDUFV3P56181 108 aaKnown RBP6.81□□□□□ -1.32
COL6A5-202ENST00000312481 NFE4Q86UQ8 179 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 LYRM9A8MSI8 78 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 MP68P56378 58 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 C20orf203Q8NBC4 194 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 KNCNA6PVL3 124 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 HTN3P15516 51 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 Q6ZUT4 128 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 C4orf3Q8WVX3 66 aa6.81□□□□□ -1.32
COL6A5-202ENST00000312481 SMKR1H3BMG3 65 aa6.8□□□□□ -1.32
COL6A5-202ENST00000312481 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
COL6A5-202ENST00000312481 COX7B2Q8TF08 81 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms