RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 C16orf74Q96GX8 76 aa10.59□□□□□ -0.71
CLCN6-201ENST00000312413 PLCE1Q9P212 2302 aa10.59□□□□□ -0.71
CLCN6-201ENST00000312413 LINC00643Q86TS7 51 aa10.59□□□□□ -0.71
CLCN6-201ENST00000312413 AJUBAQ96IF1 538 aa10.59□□□□□ -0.71
CLCN6-201ENST00000312413 IGHV4-59P01825 116 aa10.59□□□□□ -0.71
CLCN6-201ENST00000312413 VWA8A3KMH1 1905 aa10.58□□□□□ -0.72
CLCN6-201ENST00000312413 PRAC2D3DTV9 90 aa10.58□□□□□ -0.72
CLCN6-201ENST00000312413 DEFB112Q30KQ8 113 aa10.58□□□□□ -0.72
CLCN6-201ENST00000312413 C9orf47Q6ZRZ4 202 aa10.58□□□□□ -0.72
CLCN6-201ENST00000312413 MED14OSP0DP75 135 aa10.58□□□□□ -0.72
CLCN6-201ENST00000312413 WI2-2373I1.2A0A1W2PRP0 233 aa10.58□□□□□ -0.72
CLCN6-201ENST00000312413 Q8N1Y9 231 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 RITA1Q96K30 269 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 C2orf70A6NJV1 201 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 CCL24O00175 119 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 NDUFA11Q86Y39 141 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 PCNX2A6NKB5 2137 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 DEFB136Q30KP8 78 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 KRTAP27-1Q3LI81 207 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 SPATA12Q7Z6I5 190 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 PLXNA4Q9HCM2 1894 aa10.57□□□□□ -0.72
CLCN6-201ENST00000312413 TRBV6-1A0A0K0K1D8 114 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 ZNF503Q96F45 646 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 TRBV7-3A0A075B6L6 115 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 IGLV2-23P01705 113 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 HIGD2BQ4VC39 106 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 SPRNQ5BIV9 151 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 SPTSSBQ8NFR3 76 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 TMEM256-PLSCR3K7ERE1 68 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 Q6ZUT4 128 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 PKIGQ9Y2B9 76 aa10.56□□□□□ -0.72
CLCN6-201ENST00000312413 KMT2EQ8IZD2 1858 aa10.55□□□□□ -0.72
CLCN6-201ENST00000312413 RNF183Q96D59 192 aa10.55□□□□□ -0.72
CLCN6-201ENST00000312413 MRPL36Q9P0J6 103 aaKnown RBP10.55□□□□□ -0.72
CLCN6-201ENST00000312413 C19orf71A6NCJ1 209 aa10.55□□□□□ -0.72
CLCN6-201ENST00000312413 MED13Q9UHV7 2174 aa10.55□□□□□ -0.72
CLCN6-201ENST00000312413 NCR3O14931 201 aa10.55□□□□□ -0.72
CLCN6-201ENST00000312413 SLURP1P55000 103 aa10.55□□□□□ -0.72
CLCN6-201ENST00000312413 GTF3C1Q12789 2109 aa10.55□□□□□ -0.72
CLCN6-201ENST00000312413 CXCL5P42830 114 aa10.54□□□□□ -0.72
CLCN6-201ENST00000312413 TIRAPP58753 221 aa10.54□□□□□ -0.72
CLCN6-201ENST00000312413 MIR7-3HGQ8N6C7 128 aa10.54□□□□□ -0.72
CLCN6-201ENST00000312413 TCL1BO95988 128 aa10.54□□□□□ -0.72
CLCN6-201ENST00000312413 NDUFA1O15239 70 aa10.54□□□□□ -0.72
CLCN6-201ENST00000312413 PDE6GP18545 87 aa10.54□□□□□ -0.72
CLCN6-201ENST00000312413 DKK4Q9UBT3 224 aa10.54□□□□□ -0.72
CLCN6-201ENST00000312413 PROP1O75360 226 aa10.54□□□□□ -0.72
CLCN6-201ENST00000312413 THSD7BQ9C0I4 1608 aa10.53□□□□□ -0.72
CLCN6-201ENST00000312413 DIRC1Q969H9 104 aa10.53□□□□□ -0.72
CLCN6-201ENST00000312413 SPATA25Q9BR10 227 aa10.53□□□□□ -0.72
CLCN6-201ENST00000312413 TEX22C9J3V5 150 aa10.53□□□□□ -0.72
CLCN6-201ENST00000312413 C20orf203Q8NBC4 194 aa10.53□□□□□ -0.72
CLCN6-201ENST00000312413 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
CLCN6-201ENST00000312413 NDUFV3P56181 108 aaKnown RBP10.53□□□□□ -0.72
CLCN6-201ENST00000312413 SEC61GP60059 68 aa10.52□□□□□ -0.73
CLCN6-201ENST00000312413 Q8N9W7 124 aa10.52□□□□□ -0.73
CLCN6-201ENST00000312413 SPART-AS1P0CW21 52 aa10.52□□□□□ -0.73
CLCN6-201ENST00000312413 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
CLCN6-201ENST00000312413 IGHV3-30P01768 117 aa10.52□□□□□ -0.73
CLCN6-201ENST00000312413 IGHV3-33P01772 117 aa10.52□□□□□ -0.73
CLCN6-201ENST00000312413 IGHV3-30-5P0DP03 117 aa10.52□□□□□ -0.73
CLCN6-201ENST00000312413 BLCAPP62952 87 aa10.52□□□□□ -0.73
CLCN6-201ENST00000312413 A0A1B0GXF2 115 aa10.52□□□□□ -0.73
CLCN6-201ENST00000312413 ZGRF1Q86YA3 2104 aa10.51□□□□□ -0.73
CLCN6-201ENST00000312413 RNF138Q8WVD3 245 aa10.51□□□□□ -0.73
CLCN6-201ENST00000312413 ZSWIM8A7E2V4 1837 aa10.51□□□□□ -0.73
CLCN6-201ENST00000312413 HELZP42694 1942 aaKnown RBP10.51□□□□□ -0.73
CLCN6-201ENST00000312413 TRBV12-3P01733 135 aa10.51□□□□□ -0.73
CLCN6-201ENST00000312413 MIAQ16674 131 aa10.51□□□□□ -0.73
CLCN6-201ENST00000312413 C11orf1Q9H5F2 150 aa10.51□□□□□ -0.73
CLCN6-201ENST00000312413 K7EMT4 169 aa10.51□□□□□ -0.73
CLCN6-201ENST00000312413 IGLV2-14P01704 120 aa10.51□□□□□ -0.73
CLCN6-201ENST00000312413 MT-ATP8P03928 68 aa10.5□□□□□ -0.73
CLCN6-201ENST00000312413 LOXL1Q08397 574 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-201ENST00000312413 UQCRQO14949 82 aa10.5□□□□□ -0.73
CLCN6-201ENST00000312413 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
CLCN6-201ENST00000312413 TRAV23DV6A0A075B6W5 121 aa10.5□□□□□ -0.73
CLCN6-201ENST00000312413 SPAG11BQ08648 103 aa10.5□□□□□ -0.73
CLCN6-201ENST00000312413 IGKV2D-26A0A0A0MRZ7 120 aa10.49□□□□□ -0.73
CLCN6-201ENST00000312413 TNRC6AQ8NDV7 1962 aaKnown RBP10.49□□□□□ -0.73
CLCN6-201ENST00000312413 COL4A6Q14031 1691 aa10.49□□□□□ -0.73
CLCN6-201ENST00000312413 NFE4Q86UQ8 179 aa10.49□□□□□ -0.73
CLCN6-201ENST00000312413 C5orf56Q8N8D9 126 aa10.49□□□□□ -0.73
CLCN6-201ENST00000312413 HHLA3Q9XRX5 114 aa10.49□□□□□ -0.73
CLCN6-201ENST00000312413 IGHV4-38-2P0DP08 117 aa10.49□□□□□ -0.73
CLCN6-201ENST00000312413 TNCP24821 2201 aa10.48□□□□□ -0.73
CLCN6-201ENST00000312413 E7EUB6 86 aa10.48□□□□□ -0.73
CLCN6-201ENST00000312413 UPK3BQ9BT76 320 aa10.48□□□□□ -0.73
CLCN6-201ENST00000312413 SEM1Q6ZVN7 128 aa10.48□□□□□ -0.73
CLCN6-201ENST00000312413 IGHV4-61A0A0C4DH41 118 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 HIST2H2BDQ6DRA6 164 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 C20orf197Q8N268 126 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 SPANXB1Q9NS25 103 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-201ENST00000312413 GRNP28799 593 aaKnown RBP10.47□□□□□ -0.73
CLCN6-201ENST00000312413 ODF3L1Q8IXM7 274 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 A0A0J9YXY3 114 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 IGLV1-47P01700 117 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 CCL18P55774 89 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 C9orf66Q5T8R8 295 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms