RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ANGP03950 147 aaKnown RBP6.37□□□□□ -1.39
VPS41-202ENST00000310301 Q6ZUT4 128 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 MRPL53Q96EL3 112 aaKnown RBP6.37□□□□□ -1.39
VPS41-202ENST00000310301 NDUFV3P56181 108 aaKnown RBP6.37□□□□□ -1.39
VPS41-202ENST00000310301 KMT2EQ8IZD2 1858 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 TMEM131Q92545 1883 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 MP68P56378 58 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 ZNF491Q8N8L2 437 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 IGF2BP2-AS1Q96M15 143 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 DOPEY2Q9Y3R5 2298 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 MT-ATP8P03928 68 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS41-202ENST00000310301 SND1-IT1Q9HBX3 110 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 SPTBN4Q9H254 2564 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 APOC4P55056 127 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 TMEM61Q8N0U2 210 aa6.37□□□□□ -1.39
VPS41-202ENST00000310301 DIAPH2-AS1Q14236 149 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 DAND5Q8N907 189 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 LINC00311Q8N616 119 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 IGFBPL1Q8WX77 278 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 AGPAT4-IT1Q9H0P7 198 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 DOCK10Q96BY6 2186 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 A0A0J9YXV3 536 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 A0A0U1RQV1 116 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 IGHV4-59P01825 116 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 SPATA12Q7Z6I5 190 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 VSIG2Q96IQ7 327 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 PSMG3-AS1Q96PY0 264 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 C14orf132Q9NPU4 83 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 MSRB1Q9NZV6 116 aa6.36□□□□□ -1.39
VPS41-202ENST00000310301 H3BUA1 57 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 NREPQ16612 68 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
VPS41-202ENST00000310301 SPTSSBQ8NFR3 76 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 DOCK7Q96N67 2140 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 ATP5G1P05496 136 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 MPLKIPQ8TAP9 179 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 MED13Q9UHV7 2174 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 H3BT86 120 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 PKIGQ9Y2B9 76 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 C5orf38Q86SI9 138 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 GTSF1Q8WW33 167 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 SPATA25Q9BR10 227 aa6.35□□□□□ -1.39
VPS41-202ENST00000310301 C22orf46C9J442 243 aa6.34□□□□□ -1.39
VPS41-202ENST00000310301 HEATR5AQ86XA9 2040 aa6.34□□□□□ -1.39
VPS41-202ENST00000310301 MYO18BQ8IUG5 2567 aa6.34□□□□□ -1.39
VPS41-202ENST00000310301 IGHV7-4-1A0A0J9YVY3 117 aa6.34□□□□□ -1.39
VPS41-202ENST00000310301 E9PLD3 99 aa6.34□□□□□ -1.39
VPS41-202ENST00000310301 MYCNOSP40205 109 aa6.34□□□□□ -1.39
VPS41-202ENST00000310301 OPRPNQ99935 248 aaPredicted RBP6.34□□□□□ -1.39
VPS41-202ENST00000310301 TCL1BO95988 128 aa6.34□□□□□ -1.39
VPS41-202ENST00000310301 FRMD6-AS1P0C7T7 363 aa6.34□□□□□ -1.39
VPS41-202ENST00000310301 C8orf31Q8N9H6 132 aa6.34□□□□□ -1.39
VPS41-202ENST00000310301 ZNF503-AS2A6NEH8 195 aa6.34□□□□□ -1.4
VPS41-202ENST00000310301 HOXB4P17483 251 aaPredicted RBP6.34□□□□□ -1.4
VPS41-202ENST00000310301 RSPO1Q2MKA7 263 aaPredicted RBP6.34□□□□□ -1.4
VPS41-202ENST00000310301 LINC00643Q86TS7 51 aa6.34□□□□□ -1.4
VPS41-202ENST00000310301 LECT2O14960 151 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 U3KQE9 123 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 FASNP49327 2511 aaKnown RBP6.33□□□□□ -1.4
VPS41-202ENST00000310301 TRAV23DV6A0A075B6W5 121 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 FSTL3O95633 263 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 TOMM6Q96B49 74 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 V9GYY9 64 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 JMJD7-PLA2G4BH0Y9G9 81 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 RPL39P62891 51 aaKnown RBP6.33□□□□□ -1.4
VPS41-202ENST00000310301 UBE2BP63146 152 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 ZNF524Q96C55 264 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 CENPVL3A0A0U1RRI6 287 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 UQCRQO14949 82 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 GP9P14770 177 aa6.33□□□□□ -1.4
VPS41-202ENST00000310301 TNFRSF13BO14836 293 aaPredicted RBP6.32□□□□□ -1.4
VPS41-202ENST00000310301 INSL3P51460 131 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 ODF1Q14990 250 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 DNAJC9-AS1A6NH13 148 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 WISP2O76076 250 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 IGHV4-38-2P0DP08 117 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 Q6ZQT7 251 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 NDUFA11Q86Y39 141 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 CCDC168Q8NDH2 2452 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 WNK2Q9Y3S1 2297 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 Q8N1Y9 231 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 NOP10Q9NPE3 64 aaKnown RBP6.32□□□□□ -1.4
VPS41-202ENST00000310301 IGLV3-1P01715 115 aa6.32□□□□□ -1.4
VPS41-202ENST00000310301 SPANXB1Q9NS25 103 aaPredicted RBP6.32□□□□□ -1.4
VPS41-202ENST00000310301 CCL24O00175 119 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 NCR3O14931 201 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 C3orf22Q8N5N4 141 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 ETDCA0A1B0GVM5 59 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 TRBV12-3P01733 135 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 C11orf86A6NJI1 115 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 PROP1O75360 226 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 IGLC6P0CF74 106 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 RBX1P62877 108 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 PIFOQ8TCI5 191 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 Q9HAA7 133 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 LENEPQ9Y5L5 61 aa6.31□□□□□ -1.4
VPS41-202ENST00000310301 LMO4P61968 165 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms