RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CR1P17927 2039 aa7.9□□□□□ -1.15
APOBEC3F-201ENST00000308521 MTORP42345 2549 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 TRBV20-1A0A075B6N2 111 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 H3BUX3 64 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 PRSS1P07477 247 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 C21orf62Q9NYP8 219 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 IGLV2-18A0A075B6J9 118 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 ATP6V0E1O15342 81 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 SCGB2A1O75556 95 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 SNCGO76070 127 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 AMTNQ6UX39 209 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 MSRB1Q9NZV6 116 aa7.89□□□□□ -1.15
APOBEC3F-201ENST00000308521 ORM1P02763 201 aa7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 WFDC11Q8NEX6 87 aa7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 Q8TAT8 98 aa7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 IGHV3-35A0A0C4DH35 117 aa7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 RBAKDNA6NC62 111 aa7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 ID1P41134 155 aa7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 MRPL23Q16540 153 aaKnown RBP7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 Q6ZS46 218 aa7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 FOXC2Q99958 501 aa7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 MDFICQ9P1T7 246 aa7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 SETD2Q9BYW2 2564 aaPredicted RBP7.88□□□□□ -1.15
APOBEC3F-201ENST00000308521 IGHV3OR16-8A0A075B7F1 116 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 HOXA3O43365 443 aaPredicted RBP7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 IGHV4-31P0DP07 118 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 OR10J6PQ8NGY7 276 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 CARD19Q96LW7 228 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 TRBV7-3A0A075B6L6 115 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 GAS8-AS1O95177 125 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 BLCAPP62952 87 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 TMEM78Q5T7P6 136 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 ZC2HC1BQ5TFG8 222 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 GTSCR1Q86UQ5 136 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 C5orf56Q8N8D9 126 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 DNAJC30Q96LL9 226 aa7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 BEX4Q9NWD9 120 aaPredicted RBP7.87□□□□□ -1.15
APOBEC3F-201ENST00000308521 A8MWV9 139 aa7.86□□□□□ -1.15
APOBEC3F-201ENST00000308521 GLMPQ8WWB7 406 aa7.86□□□□□ -1.15
APOBEC3F-201ENST00000308521 CTSGP08311 255 aa7.86□□□□□ -1.15
APOBEC3F-201ENST00000308521 DEFB112Q30KQ8 113 aa7.86□□□□□ -1.15
APOBEC3F-201ENST00000308521 MYOZ3Q8TDC0 251 aa7.86□□□□□ -1.15
APOBEC3F-201ENST00000308521 TTTY13Q9BZ97 58 aa7.86□□□□□ -1.15
APOBEC3F-201ENST00000308521 HLA-DMBP28068 263 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 UBE2D3P61077 147 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 UBE2D2P62837 147 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 MORN3Q6PF18 240 aaPredicted RBP7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 IL17RELQ6ZVW7 336 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 HIST1H4GQ99525 98 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 CSDC2Q9Y534 153 aaKnown RBP7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 TRAV25A0A0B4J276 109 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 IGHV4-59P01825 116 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 LAGE3Q14657 143 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 NRACQ8N912 160 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 LINC01600Q96MT4 127 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 DUX5Q96PT3 197 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 MOB4Q9Y3A3 225 aa7.85□□□□□ -1.15
APOBEC3F-201ENST00000308521 IGHV4-4A0A075B6R2 117 aa7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 PF4V1P10720 104 aa7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 PLNP26678 52 aa7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 ERCC8Q13216 396 aa7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 IGFL4Q6B9Z1 124 aa7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 MAPKAPK5-AS1Q8N8E1 139 aa7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 SLC50A1Q9BRV3 221 aa7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 TMEM160Q9NX00 188 aa7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 MRPL35Q9NZE8 188 aaKnown RBP7.84□□□□□ -1.15
APOBEC3F-201ENST00000308521 TRAV12-1A0A0B4J245 112 aa7.84□□□□□ -1.16
APOBEC3F-201ENST00000308521 IGKV3D-20A0A0C4DH25 116 aa7.84□□□□□ -1.16
APOBEC3F-201ENST00000308521 KLK9Q2XQG4 91 aa7.84□□□□□ -1.16
APOBEC3F-201ENST00000308521 C15orf32Q32M92 178 aa7.84□□□□□ -1.16
APOBEC3F-201ENST00000308521 MEIG1Q5JSS6 88 aa7.84□□□□□ -1.16
APOBEC3F-201ENST00000308521 KLK9Q9UKQ9 250 aa7.84□□□□□ -1.16
APOBEC3F-201ENST00000308521 PRAC2D3DTV9 90 aa7.83□□□□□ -1.16
APOBEC3F-201ENST00000308521 PPIFP30405 207 aaKnown RBP7.83□□□□□ -1.16
APOBEC3F-201ENST00000308521 LRRC75A-AS1Q8N1F1 130 aa7.83□□□□□ -1.16
APOBEC3F-201ENST00000308521 FLNBO75369 2602 aaKnown RBP7.83□□□□□ -1.16
APOBEC3F-201ENST00000308521 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.83□□□□□ -1.16
APOBEC3F-201ENST00000308521 MRPL53Q96EL3 112 aaKnown RBP7.83□□□□□ -1.16
APOBEC3F-201ENST00000308521 A6NDX4 124 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 SCGB1C2P0DMR2 95 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 FAM159AQ6UWV7 190 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 RASL10AQ92737 203 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 PPDPFQ9H3Y8 114 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 IGHV7-4-1A0A0J9YVY3 117 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 H7C1H1 209 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 BUB3O43684 328 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 TRGV3P03979 118 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 FAM110DQ8TAY7 271 aaPredicted RBP7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 AGPAT4-IT1Q9H0P7 198 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 C11orf21Q9P2W6 132 aa7.82□□□□□ -1.16
APOBEC3F-201ENST00000308521 TRAV41A0A0B4J266 112 aa7.81□□□□□ -1.16
APOBEC3F-201ENST00000308521 A0A1B0GX51 115 aa7.81□□□□□ -1.16
APOBEC3F-201ENST00000308521 UBE2D1P51668 147 aa7.81□□□□□ -1.16
APOBEC3F-201ENST00000308521 F8VRH5 84 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms