RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 IGHV3-33P01772 117 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 S100A9P06702 114 aaKnown RBP7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 IGHV3-30-3P0DP02 117 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 IGHV3-30-5P0DP03 117 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 ZNF674Q2M3X9 581 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 DNLZQ5SXM8 178 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 TMUB2Q71RG4 321 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 COX8CQ7Z4L0 72 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 MBD3L1Q8WWY6 194 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 JPT2Q9H910 190 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 Q9HAA7 133 aa7.35□□□□□ -1.23
HMGN1P35-201ENST00000303758 EIF5AL1Q6IS14 154 aaKnown RBP7.34□□□□□ -1.23
HMGN1P35-201ENST00000303758 CDPF1Q6NVV7 123 aa7.34□□□□□ -1.23
HMGN1P35-201ENST00000303758 ZFP82Q8N141 532 aa7.34□□□□□ -1.23
HMGN1P35-201ENST00000303758 SAMD10Q9BYL1 202 aa7.34□□□□□ -1.23
HMGN1P35-201ENST00000303758 A0A087WWL8 130 aa7.33□□□□□ -1.24
HMGN1P35-201ENST00000303758 TEX46H3BTG2 121 aa7.33□□□□□ -1.24
HMGN1P35-201ENST00000303758 FUSP35637 526 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGN1P35-201ENST00000303758 PRR27Q6MZM9 219 aa7.33□□□□□ -1.24
HMGN1P35-201ENST00000303758 Q6ZSN1 163 aa7.33□□□□□ -1.24
HMGN1P35-201ENST00000303758 BAGE2Q86Y30 109 aa7.33□□□□□ -1.24
HMGN1P35-201ENST00000303758 C14orf178Q8N769 122 aaPredicted RBP7.33□□□□□ -1.24
HMGN1P35-201ENST00000303758 MANBALQ9NQG1 85 aa7.33□□□□□ -1.24
HMGN1P35-201ENST00000303758 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
HMGN1P35-201ENST00000303758 IBA57-AS1B1ANH7 110 aa7.32□□□□□ -1.24
HMGN1P35-201ENST00000303758 SFRP2Q96HF1 295 aa7.32□□□□□ -1.24
HMGN1P35-201ENST00000303758 GNG13Q9P2W3 67 aa7.32□□□□□ -1.24
HMGN1P35-201ENST00000303758 URGCP-MRPS24S4R325 110 aa7.32□□□□□ -1.24
HMGN1P35-201ENST00000303758 A0A087WWC5 75 aa7.31□□□□□ -1.24
HMGN1P35-201ENST00000303758 LINC00694P0DN24 101 aa7.31□□□□□ -1.24
HMGN1P35-201ENST00000303758 RAB5CP51148 216 aa7.31□□□□□ -1.24
HMGN1P35-201ENST00000303758 RPL19P84098 196 aaKnown RBP7.31□□□□□ -1.24
HMGN1P35-201ENST00000303758 ZNF56Q15929 161 aa7.31□□□□□ -1.24
HMGN1P35-201ENST00000303758 UFSP1Q6NVU6 142 aa7.31□□□□□ -1.24
HMGN1P35-201ENST00000303758 SCRT2Q9NQ03 307 aa7.31□□□□□ -1.24
HMGN1P35-201ENST00000303758 IFNA1P01562 189 aa7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 CXCL1P09341 107 aa7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 RPL35P42766 123 aaKnown RBP7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 RPL36AP83881 106 aaKnown RBP7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 LAGE3Q14657 143 aa7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 TOR2AQ5JU69 321 aa7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 SPANXN1Q5VSR9 72 aa7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 KCNIP4Q6PIL6 250 aa7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 RPL36ALQ969Q0 106 aaKnown RBP7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 TM2D2Q9BX73 214 aa7.3□□□□□ -1.24
HMGN1P35-201ENST00000303758 IGLV5-52A0A0A0MRZ9 124 aa7.29□□□□□ -1.24
HMGN1P35-201ENST00000303758 TRBV10-1A0A0K0K1A3 114 aa7.29□□□□□ -1.24
HMGN1P35-201ENST00000303758 TCTE3Q8IZS6 198 aa7.29□□□□□ -1.24
HMGN1P35-201ENST00000303758 Q8N1X5 172 aa7.29□□□□□ -1.24
HMGN1P35-201ENST00000303758 OR10AG1Q8NH19 301 aa7.29□□□□□ -1.24
HMGN1P35-201ENST00000303758 MLST8Q9BVC4 326 aa7.29□□□□□ -1.24
HMGN1P35-201ENST00000303758 KRTAP4-5Q9BYR2 181 aa7.29□□□□□ -1.24
HMGN1P35-201ENST00000303758 TRAV8-3A0A0A6YYJ7 113 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 MUC21A0A0G2JKD1 596 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 MUC21A0A140T8X8 626 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 SMIM17P0DL12 118 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 GCSHP23434 173 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 SULT1A2P50226 295 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 SSTP61278 116 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 CCL20P78556 96 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 CENPWQ5EE01 88 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 Q8N3U1 123 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 C11orf52Q96A22 123 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 DAZAP1Q96EP5 407 aaKnown RBP7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 DERL1Q9BUN8 251 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 Q9UF83 564 aa7.28□□□□□ -1.24
HMGN1P35-201ENST00000303758 TRBV7-3A0A075B6L6 115 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 A0A087WX48 190 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 TRAV1-1A0A0B4J248 108 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 F5H697 171 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 SNAI2O43623 268 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 C1QBP02746 253 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 RAB4BP61018 213 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 DAZ4Q86SG3 579 aaKnown RBP7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 SLC51BQ86UW2 128 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 NTN5Q8WTR8 489 aaPredicted RBP7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 RMI2Q96E14 147 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 AP1S3Q96PC3 154 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 TPPP3Q9BW30 176 aa7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 DAZ3Q9NR90 486 aaKnown RBP7.27□□□□□ -1.25
HMGN1P35-201ENST00000303758 LRCOL1A6NCL2 159 aa7.26□□□□□ -1.25
HMGN1P35-201ENST00000303758 PDE6DO43924 150 aa7.26□□□□□ -1.25
HMGN1P35-201ENST00000303758 OR5AL1P0C617 328 aa7.26□□□□□ -1.25
HMGN1P35-201ENST00000303758 GNG4P50150 75 aa7.26□□□□□ -1.25
HMGN1P35-201ENST00000303758 KRTAP10-1P60331 282 aa7.26□□□□□ -1.25
HMGN1P35-201ENST00000303758 UBE2D3P61077 147 aa7.26□□□□□ -1.25
HMGN1P35-201ENST00000303758 UBE2D2P62837 147 aa7.26□□□□□ -1.25
HMGN1P35-201ENST00000303758 MEF2BQ02080 365 aaPredicted RBP7.26□□□□□ -1.25
HMGN1P35-201ENST00000303758 Q8N814 137 aa7.26□□□□□ -1.25
HMGN1P35-201ENST00000303758 XKRY2A2RUG3 117 aa7.25□□□□□ -1.25
HMGN1P35-201ENST00000303758 RPS20P60866 119 aaKnown RBP7.25□□□□□ -1.25
HMGN1P35-201ENST00000303758 ELOBQ15370 118 aa7.25□□□□□ -1.25
HMGN1P35-201ENST00000303758 AKAP14Q86UN6 197 aa7.25□□□□□ -1.25
HMGN1P35-201ENST00000303758 NIT1Q86X76 327 aa7.25□□□□□ -1.25
HMGN1P35-201ENST00000303758 OR2D3Q8NGH3 330 aa7.25□□□□□ -1.25
HMGN1P35-201ENST00000303758 CHCHD7Q9BUK0 85 aa7.25□□□□□ -1.25
HMGN1P35-201ENST00000303758 SSBP4Q9BWG4 385 aaPredicted RBP7.25□□□□□ -1.25
HMGN1P35-201ENST00000303758 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
HMGN1P35-201ENST00000303758 KLK12Q9UKR0 248 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms