RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 GTF3C1Q12789 2109 aa4.96□□□□□ -1.62
SCAPER-201ENST00000303521 USF3Q68DE3 2245 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 CFC1BP0CG36 223 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 CFC1P0CG37 223 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 GAGE2AQ6NT46 116 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 TRPT1Q86TN4 253 aaKnown RBP4.95□□□□□ -1.62
SCAPER-201ENST00000303521 LY6G5BQ8NDX9 201 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 IGHV3-49A0A0A0MS15 119 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 A6NDX4 124 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 Q6ZR03 302 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 C14orf178Q8N769 122 aaPredicted RBP4.95□□□□□ -1.62
SCAPER-201ENST00000303521 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 MRPL53Q96EL3 112 aaKnown RBP4.95□□□□□ -1.62
SCAPER-201ENST00000303521 ANKRD29Q8N6D5 301 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 IGHV3-64A0A075B6Q5 118 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 E9PLD3 99 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 ERCC8Q13216 396 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 NTN5Q8WTR8 489 aaPredicted RBP4.95□□□□□ -1.62
SCAPER-201ENST00000303521 LINC00527Q9UJ94 153 aa4.95□□□□□ -1.62
SCAPER-201ENST00000303521 LEPROTO15243 131 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 ATP6V0E1O15342 81 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 SPART-AS1P0CW21 52 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 MRPL23Q16540 153 aaKnown RBP4.94□□□□□ -1.62
SCAPER-201ENST00000303521 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 PTPRBP23467 1997 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 PRSS29PA6NIE9 313 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 J3KT08 172 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 J3QQQ9 107 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 ASPHD1Q5U4P2 390 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 Q8N976 141 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 PATE2Q6UY27 113 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 Q6ZUT4 128 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 C11orf53Q8IXP5 236 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 DNAJC30Q96LL9 226 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 CARD19Q96LW7 228 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 TM2D2Q9BX73 214 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 IGHV3OR16-8A0A075B7F1 116 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 ATP5G1P05496 136 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 MED12Q93074 2177 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 SRRM4A7MD48 611 aaKnown RBP4.94□□□□□ -1.62
SCAPER-201ENST00000303521 ODF1Q14990 250 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 GDF5OSQ5U4N7 250 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 Q6ZPA2 131 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 Q6ZSV7 163 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 SPG11Q96JI7 2443 aa4.94□□□□□ -1.62
SCAPER-201ENST00000303521 EIF4EBP1Q13541 118 aaPredicted RBP4.93□□□□□ -1.62
SCAPER-201ENST00000303521 ZNF503Q96F45 646 aa4.93□□□□□ -1.62
SCAPER-201ENST00000303521 ZNF415Q09FC8 603 aa4.93□□□□□ -1.62
SCAPER-201ENST00000303521 KRTAP21-3Q3LHN1 58 aa4.93□□□□□ -1.62
SCAPER-201ENST00000303521 HEATR1Q9H583 2144 aaKnown RBP4.93□□□□□ -1.62
SCAPER-201ENST00000303521 IGHG2P01859 326 aa4.93□□□□□ -1.62
SCAPER-201ENST00000303521 EGR2P11161 476 aaPredicted RBP4.93□□□□□ -1.62
SCAPER-201ENST00000303521 LINC01006Q8NI28 216 aa4.93□□□□□ -1.62
SCAPER-201ENST00000303521 RHPN1-AS1Q9BWJ2 59 aa4.93□□□□□ -1.62
SCAPER-201ENST00000303521 I3L3M4 83 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 RHOHQ15669 191 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 MORN5Q5VZ52 161 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 SMR3AQ99954 134 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 TNRC6BQ9UPQ9 1833 aaKnown RBP4.92□□□□□ -1.62
SCAPER-201ENST00000303521 HOXD3P31249 432 aaPredicted RBP4.92□□□□□ -1.62
SCAPER-201ENST00000303521 ZNF876PQ49A33 203 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 LENEPQ9Y5L5 61 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 CACNA1DQ01668 2161 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 TRAV26-2A0A0B4J265 109 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 LHBP01229 141 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 LINC00310P59036 64 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 HIST1H4AP62805 103 aaKnown RBP4.92□□□□□ -1.62
SCAPER-201ENST00000303521 ZNF491Q8N8L2 437 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 TOMM6Q96B49 74 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 C2orf91Q6ZV80 131 aa4.92□□□□□ -1.62
SCAPER-201ENST00000303521 SPRY2O43597 315 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 AKAP6Q13023 2319 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 IGFL4Q6B9Z1 124 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 UFSP1Q6NVU6 142 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 PKD1L2Q7Z442 2459 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 NAV2Q8IVL1 2488 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 ZNF407Q9C0G0 2248 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 TRBV10-2A0A0K0K1G8 114 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 F5H768 121 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 H3BT86 120 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 SOCS3O14543 225 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 LINC01620Q4KN68 170 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 WWC2-AS2Q96NR7 200 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 ATOX1O00244 68 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 NPC2P61916 151 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 RNF152Q8N8N0 203 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 SPXQ9BT56 116 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 ZNF469Q96JG9 3925 aaPredicted RBP4.91□□□□□ -1.62
SCAPER-201ENST00000303521 NDUFV3P56181 108 aaKnown RBP4.91□□□□□ -1.62
SCAPER-201ENST00000303521 MLST8Q9BVC4 326 aa4.91□□□□□ -1.62
SCAPER-201ENST00000303521 IGKV3-20P01619 116 aa4.9□□□□□ -1.62
SCAPER-201ENST00000303521 CTSZQ9UBR2 303 aa4.9□□□□□ -1.62
SCAPER-201ENST00000303521 PRB4P10163 310 aaPredicted RBP4.9□□□□□ -1.62
SCAPER-201ENST00000303521 DEFB131AP59861 70 aa4.9□□□□□ -1.62
SCAPER-201ENST00000303521 TPSG1Q9NRR2 321 aa4.9□□□□□ -1.62
SCAPER-201ENST00000303521 NDUFA12Q9UI09 145 aa4.9□□□□□ -1.62
SCAPER-201ENST00000303521 IGKV1OR2-108A0A075B7D4 117 aa4.9□□□□□ -1.62
SCAPER-201ENST00000303521 ANKHD1Q8IWZ3 2542 aaKnown RBP4.9□□□□□ -1.63
SCAPER-201ENST00000303521 KIAA2026Q5HYC2 2103 aa4.9□□□□□ -1.63
SCAPER-201ENST00000303521 A0A0B4J2C4 111 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms