RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SMIM20Q8N5G0 67 aa10.8□□□□□ -0.68
SDC2-201ENST00000302190 UBR5O95071 2799 aaPredicted RBP10.8□□□□□ -0.68
SDC2-201ENST00000302190 LINC01549A6NIU2 74 aa10.8□□□□□ -0.68
SDC2-201ENST00000302190 ADARB2-AS1A8MUL3 147 aa10.8□□□□□ -0.68
SDC2-201ENST00000302190 FSTL3O95633 263 aa10.8□□□□□ -0.68
SDC2-201ENST00000302190 IGHV4-39P01824 125 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 VCX2Q9H322 139 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 SMAD5-AS1Q9Y6J3 95 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 A0A1W2PPR1 153 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 GATA3P23771 443 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 IGHV4-61A0A0C4DH41 118 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 PLNP26678 52 aa10.79□□□□□ -0.68
SDC2-201ENST00000302190 LYRM7Q5U5X0 104 aa10.78□□□□□ -0.68
SDC2-201ENST00000302190 BOD1L2Q8IYS8 172 aa10.78□□□□□ -0.68
SDC2-201ENST00000302190 SPANXB1Q9NS25 103 aaPredicted RBP10.78□□□□□ -0.68
SDC2-201ENST00000302190 C20orf78Q9BR46 151 aa10.78□□□□□ -0.68
SDC2-201ENST00000302190 SPXQ9BT56 116 aa10.78□□□□□ -0.68
SDC2-201ENST00000302190 TNFRSF18Q9Y5U5 241 aa10.78□□□□□ -0.68
SDC2-201ENST00000302190 MRGPRG-AS1Q2M3A8 158 aa10.78□□□□□ -0.68
SDC2-201ENST00000302190 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
SDC2-201ENST00000302190 SPATA25Q9BR10 227 aa10.78□□□□□ -0.68
SDC2-201ENST00000302190 IGHV1-69DA0A0B4J2H0 117 aa10.77□□□□□ -0.68
SDC2-201ENST00000302190 IGHV1-69P01742 117 aa10.77□□□□□ -0.68
SDC2-201ENST00000302190 GAGE5Q13069 117 aa10.77□□□□□ -0.68
SDC2-201ENST00000302190 GAGE6Q13070 117 aa10.77□□□□□ -0.68
SDC2-201ENST00000302190 ODF1Q14990 250 aa10.77□□□□□ -0.68
SDC2-201ENST00000302190 HIST2H2BCQ6DN03 193 aa10.77□□□□□ -0.68
SDC2-201ENST00000302190 DAZ1Q9NQZ3 744 aaKnown RBP10.77□□□□□ -0.68
SDC2-201ENST00000302190 SDHAF1A6NFY7 115 aa10.77□□□□□ -0.69
SDC2-201ENST00000302190 CCDC140Q96MF4 163 aa10.77□□□□□ -0.69
SDC2-201ENST00000302190 PRSS29PA6NIE9 313 aa10.77□□□□□ -0.69
SDC2-201ENST00000302190 F8VRH5 84 aa10.77□□□□□ -0.69
SDC2-201ENST00000302190 RPL39P62891 51 aaKnown RBP10.77□□□□□ -0.69
SDC2-201ENST00000302190 LINC01587Q99440 93 aa10.77□□□□□ -0.69
SDC2-201ENST00000302190 IGHV3-16A0A0C4DH30 117 aa10.76□□□□□ -0.69
SDC2-201ENST00000302190 SIVA1O15304 175 aa10.76□□□□□ -0.69
SDC2-201ENST00000302190 HIST2H2BDQ6DRA6 164 aa10.76□□□□□ -0.69
SDC2-201ENST00000302190 TEX29Q8N6K0 151 aa10.76□□□□□ -0.69
SDC2-201ENST00000302190 DUSP14O95147 198 aaKnown RBP10.76□□□□□ -0.69
SDC2-201ENST00000302190 INSL3P51460 131 aa10.76□□□□□ -0.69
SDC2-201ENST00000302190 ZNF625Q96I27 306 aaPredicted RBP10.76□□□□□ -0.69
SDC2-201ENST00000302190 LY6LH3BQJ8 138 aa10.76□□□□□ -0.69
SDC2-201ENST00000302190 TTC32Q5I0X7 151 aa10.76□□□□□ -0.69
SDC2-201ENST00000302190 C1orf122Q6ZSJ8 110 aa10.76□□□□□ -0.69
SDC2-201ENST00000302190 C11orf21Q9P2W6 132 aa10.76□□□□□ -0.69
SDC2-201ENST00000302190 IGHV3-53P01767 116 aa10.75□□□□□ -0.69
SDC2-201ENST00000302190 CEND1Q8N111 149 aa10.75□□□□□ -0.69
SDC2-201ENST00000302190 APCP25054 2843 aa10.75□□□□□ -0.69
SDC2-201ENST00000302190 TRBV7-9A0A0J9YWB2 115 aa10.75□□□□□ -0.69
SDC2-201ENST00000302190 CD28P10747 220 aa10.75□□□□□ -0.69
SDC2-201ENST00000302190 ZNF469Q96JG9 3925 aaPredicted RBP10.75□□□□□ -0.69
SDC2-201ENST00000302190 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
SDC2-201ENST00000302190 DEFB136Q30KP8 78 aa10.74□□□□□ -0.69
SDC2-201ENST00000302190 C12orf74Q32Q52 190 aa10.74□□□□□ -0.69
SDC2-201ENST00000302190 TNFRSF13BO14836 293 aaPredicted RBP10.74□□□□□ -0.69
SDC2-201ENST00000302190 FGF6P10767 208 aa10.74□□□□□ -0.69
SDC2-201ENST00000302190 PPP1R17O96001 155 aa10.74□□□□□ -0.69
SDC2-201ENST00000302190 ZNF843Q8N446 348 aa10.74□□□□□ -0.69
SDC2-201ENST00000302190 UBE2E2Q96LR5 201 aa10.74□□□□□ -0.69
SDC2-201ENST00000302190 A0A087WX48 190 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 MT-ATP8P03928 68 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 ZFAND6Q6FIF0 208 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 MYMXA0A1B0GTQ4 84 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 IGHV4-59P01825 116 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 VCYO14598 125 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 DEFB131AP59861 70 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 ZNF493Q6ZR52 646 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
SDC2-201ENST00000302190 OPRPNQ99935 248 aaPredicted RBP10.73□□□□□ -0.69
SDC2-201ENST00000302190 TRAV8-2A0A0B4J237 113 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 IGLL5B9A064 214 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 KMT2BQ9UMN6 2715 aaPredicted RBP10.72□□□□□ -0.69
SDC2-201ENST00000302190 FAM223BA6NKX1 122 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 IGLC6P0CF74 106 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 LINC01559Q495D7 138 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 FAM223AQ8IWN6 122 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 MEIG1Q5JSS6 88 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 C5orf56Q8N8D9 126 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 TOMM7Q9P0U1 55 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 TEX15Q9BXT5 2789 aa10.72□□□□□ -0.69
SDC2-201ENST00000302190 IGHV4-30-2A0A087WSY4 118 aa10.71□□□□□ -0.69
SDC2-201ENST00000302190 MSMBP08118 114 aa10.71□□□□□ -0.69
SDC2-201ENST00000302190 CITED1Q99966 193 aa10.71□□□□□ -0.69
SDC2-201ENST00000302190 SIRPDQ9H106 197 aa10.71□□□□□ -0.69
SDC2-201ENST00000302190 RNF185Q96GF1 192 aa10.71□□□□□ -0.69
SDC2-201ENST00000302190 ODF3BA8MYP8 253 aa10.71□□□□□ -0.7
SDC2-201ENST00000302190 A0A096LNJ9 63 aa10.7□□□□□ -0.7
SDC2-201ENST00000302190 SNCGO76070 127 aa10.7□□□□□ -0.7
SDC2-201ENST00000302190 RPL13AP40429 203 aaKnown RBP10.7□□□□□ -0.7
SDC2-201ENST00000302190 RNF223E7ERA6 249 aa10.7□□□□□ -0.7
SDC2-201ENST00000302190 TSPAN13O95857 204 aa10.7□□□□□ -0.7
SDC2-201ENST00000302190 C20orf173Q96LM9 149 aa10.7□□□□□ -0.7
SDC2-201ENST00000302190 ERG28Q9UKR5 140 aa10.7□□□□□ -0.7
SDC2-201ENST00000302190 C10orf99Q6UWK7 81 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms